LPAR2 (lysophosphatidic acid receptor 2)

Gene: LPAR2 (lysophosphatidic acid receptor 2) Sus scrofa

Analyze

Symbol:

LPAR2

Name:

lysophosphatidic acid receptor 2

RGD ID:

14185254

Description:

ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); lysophosphatidic acid receptor activity (inferred); PDZ domain binding (inferred); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); positive regulation of MAPK cascade (ortholog); positive regulation of Rho protein signal transduction (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN glutamatergic synapse (ortholog); presynaptic active zone membrane (ortholog)

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

EDG4

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	58,298,271 - 58,300,844 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	58,296,381 - 58,300,869 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	58,395,164 - 58,399,454 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Pig Cytomap	2	q2.1	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

adenylate cyclase-activating G protein-coupled receptor signaling pathway (IBA,IEA)

G protein-coupled receptor signaling pathway (IEA,ISO)

positive regulation of MAPK cascade (IEA,ISO)

positive regulation of Rho protein signal transduction (IEA,ISO)

regulation of metabolic process (IBA,IEA)

signal transduction (IEA)

Cellular Component

cell surface (IEA)

cytoplasm (IBA,IEA)

endocytic vesicle (IEA)

glutamatergic synapse (IEA,ISO)

membrane (IEA)

plasma membrane (IBA,IEA)

presynaptic active zone membrane (IEA,ISO)

Molecular Function

G protein-coupled receptor activity (IBA,IEA)

lysophosphatidic acid receptor activity (IEA)

PDZ domain binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:18379896	PMID:22301074

Genomics

Comparative Map Data

LPAR2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	58,298,271 - 58,300,844 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	58,296,381 - 58,300,869 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	58,395,164 - 58,399,454 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Pig Cytomap	2	q2.1	NCBI

LPAR2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	19,623,655 - 19,628,220 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	19,623,655 - 19,628,930 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	19,734,464 - 19,739,029 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	19,595,477 - 19,600,017 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	19,595,476 - 19,600,017	NCBI
Celera	19	19,638,539 - 19,643,114 (-)	NCBI		Celera
Cytogenetic Map	19	p13.11	NCBI
HuRef	19	19,296,769 - 19,301,344 (-)	NCBI		HuRef
CHM1_1	19	19,735,551 - 19,740,126 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	19,761,164 - 19,765,730 (-)	NCBI		T2T-CHM13v2.0

Lpar2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	70,275,215 - 70,283,752 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	70,275,079 - 70,283,752 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	69,822,565 - 69,831,102 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	69,822,429 - 69,831,102 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	72,346,464 - 72,355,001 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	72,751,418 - 72,760,091 (+)	NCBI		MGSCv36	mm8
Celera	8	72,373,530 - 72,382,072 (+)	NCBI		Celera
Cytogenetic Map	8	B3.3	NCBI
cM Map	8	33.91	NCBI

Lpar2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	19,625,974 - 19,633,905 (-)	NCBI		GRCr8
mRatBN7.2	16	19,592,067 - 19,599,998 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	19,595,655 - 19,599,998 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	19,633,944 - 19,641,804 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	20,771,896 - 20,779,773 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	19,686,925 - 19,694,785 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	21,343,313 - 21,348,913 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	21,344,456 - 21,348,391 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	21,257,145 - 21,262,902 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	20,079,826 - 20,085,307 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	16	19,783,465 - 19,789,027 (-)	NCBI		Celera
Cytogenetic Map	16	p14	NCBI

Lpar2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955524	2,390,598 - 2,394,877 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955524	2,390,354 - 2,395,436 (+)	NCBI	ChiLan1.0	ChiLan1.0

LPAR2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	24,484,829 - 24,489,696 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	23,491,289 - 23,496,154 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	19,060,927 - 19,065,792 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	20,057,179 - 20,062,171 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	20,057,179 - 20,061,260 (-)	Ensembl	panpan1.1		panPan2

LPAR2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	43,646,642 - 43,650,270 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	43,647,653 - 43,650,710 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	43,562,238 - 43,565,865 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	44,132,323 - 44,135,954 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	44,133,607 - 44,136,385 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	43,370,025 - 43,373,646 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	43,779,532 - 43,783,139 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	44,055,222 - 44,058,857 (+)	NCBI		UU_Cfam_GSD_1.0

Lpar2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	202,323,008 - 202,326,916 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936596	1,872,862 - 1,878,402 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936596	1,872,919 - 1,878,304 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LPAR2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	18,082,907 - 18,088,240 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	18,082,784 - 18,087,145 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666074	1,210,591 - 1,216,133 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Lpar2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624908	2,349,477 - 2,357,633 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624908	2,349,783 - 2,357,969 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in LPAR2
46 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	reproductive system	respiratory system
High
Medium
Low	9	1		2		10	3	3
Below cutoff	1	1	1	1	2	8

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001162401	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005654915	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005654916	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005654917	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005654918	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EF183524	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	EF546799	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FP017144	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01080653	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000038879 ⟹ ENSSSCP00000036245

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	58,298,271 - 58,300,844 (+)	Ensembl

RefSeq Acc Id:

NM_001162401 ⟹ NP_001155873

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	58,298,271 - 58,300,844 (+)	NCBI

Sequence:

show sequence

AGATGGTCACCATGGGCCAGTGCTACTACAATGAGACCATCGGCTTCTTCTATAACAACAGCGG
CAAAGAGCTCAGCTCCCACTGGCGGCCTAAAGATGTGGTTGTGGTGGCACTGGGGCTGACTGTC
AGTGTGCTGGTTCTGCTGACCAACCTGCTAGTCATCGCAGCCATCGCCTCCAACCGCCGTTTCC
ACCAGCCTATTTACTACCTGCTGGGCAACCTGGCTGCAGCCGACCTCTTTGCAGGTGTAGCCTA
CCTCTTCCTCATGTTCCACACAGGCCCACGCACAGCCCGGCTCTCACTTCAGGGCTGGTTCTTG
CGGCAGGGCCTGTTGGATACAAGCCTGACGGCATCTGTGGCTACACTTCTGGCCATTGCTGTGG
AGCGTCACCGAAGTGTGATGGCCGTGCAGCTGCATAGCCGCCTACCACGAGGCCGGGTCATCAT
GCTCATCGTGGGCGTGTGGGTGGCTGCGCTGGGCCTAGGGCTGCTGCCTGCCCGCTCCTGGCAC
TGCCTCTGTGCCCTGGACCGCTGCTCACGCATGGCCCCCCTGCTCAGCCGCTCCTACCTGGCCG
TCTGGGCCCTGTCCAGCTTGCTTGTCTTCCTGCTCATGGTGGCTGTCTACACTCGCATTTTCTT
CTATGTGAGACGGCGGGTGCAGCGCATGGCAGAGCATGTCAGCTGCCATCCCCGCTACCGTGAA
ACCACACTCAGCCTGGTCAAGACTGTTGTCATCATTCTGGGAGCATTCGTCATCTGCTGGACGC
CGGGCCAGGTTGTGCTTCTCCTGGATGGTCTGGGCTGCAAGTCTTGCAACGTCTTGGCTGTGGA
GAAGTATTTCCTACTCTTAGCAGAGGCCAACTCACTGGTCAACGCCGTGGTGTACTCATGCCGT
GATGCTGAGATGCGCCGCACCTTCCGCCGCCTCCTCTGCTGTCTGTGCCTCCGCCAGTCTGACC
ACAAGTCTGTTCGCTACACACCCTCCACCCAGACAGGCACAAGCACTCGCATCATGCTTCCTGA
GAATGGCCATCCCCTGATGGACTCCACCCTTTAGCTAACCTTGGACTTCGGCAGGATAGAGCAA
ATGCCAGATCGCTGCCCCTGGCCACCTGTGGCTGCACCTGGCTCTACCCAATCTGCAGGCCAGA
CTTAAGGCAGACCCTCAGTCTGACATGGCACGAAACCACTGCCTGTCCCACCCAGACCCGCAAC
TGGGCCTGTCTTAGGCCTAGAGATTGGAGTCATGTAAGCACCCAGGAAAAGAGTTGAATGGGTG
CAGGAATATGGCCCTTCAGTCATCTCAGGCTGTAGGGCTTTTTAACAGACACTTTTCTGTTTTT
ACCACACATCCCTGGTAAACTCTGTGGACTGCTTCCTTGTCCATGGTGGTGCGGGTAATAAAGG
TGGGAGAGATGAGGACTCTCCCAGGCCACGCTGCCCAGTGCGAACAGGGTAATAAGGATGGACT
GCAGGTGCCCCATCTGCCTGAGGCTGGTGGTTTAGGGGGCACAGACTGTGGAGTGGTGAGTGTG
ATCTGGGAAAGGTTTAAGACCCCTCACAGCCTCCAGGGGGTCTTGCCTATCCCCATTAGAATTG
AGGAGGTCTATGAAGGGAGTA

hide sequence

RefSeq Acc Id:

XM_005654915 ⟹ XP_005654972

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	58,297,080 - 58,300,869 (+)	NCBI

Sequence:

show sequence

CCTAGGTGGTGGGGGCGGGGCACTGCGGCTGGGGCGGGGCGGTGGGACCCCGCCTCCCGCGCTC
TTTTGGTCGCTAGTGCCCAGCGCAGCCAGACTCTCCTCTGCTCCCGCCGTGGTCTCCTGGCCAT
GGGTCTCGGGCTCGAGGCCGCCCCATCTGCGGCGTGACGGGCGGCCCAGATGGTCACCATGGGC
CAGTGCTACTACAATGAGACCATCGGCTTCTTCTATAACAACAGCGGCAAAGAGCTCAGCTCCC
ACTGGCGGCCTAAAGATGTGGTTGTGGTGGCACTGGGGCTGACTGTCAGTGTGCTGGTTCTGCT
GACCAACCTGCTAGTCATCGCAGCCATCGCCTCCAACCGCCGTTTCCACCAGCCTATTTACTAC
CTGCTGGGCAACCTGGCTGCAGCCGACCTCTTTGCAGGTGTAGCCTACCTCTTCCTCATGTTCC
ACACAGGCCCACGCACAGCCCGGCTCTCACTTCAGGGCTGGTTCTTGCGGCAGGGCCTGTTGGA
TACAAGCCTGACGGCATCTGTGGCTACACTTCTGGCCATTGCTGTGGAGCGTCACCGAAGTGTG
ATGGCCGTGCAGCTGCATAGCCGCCTACCACGAGGCCGGGTCATCATGCTCATCGTGGGCGTGT
GGGTGGCTGCGCTGGGCCTAGGGCTGCTGCCTGCCCACTCCTGGCACTGCCTCTGTGCCCTGGA
CCGCTGCTCACGCATGGCCCCCCTGCTCAGCCGCTCCTACCTGGCCGTCTGGGCCCTGTCCAGC
TTGCTTGTCTTCCTGCTCATGGTGGCTGTCTACACTCGCATTTTCTTCTATGTGAGGCGGCGGG
TGCAGCGCATGGCAGAGCATGTCAGCTGCCATCCCCGCTACCGTGAAACCACACTCAGCCTGGT
CAAGACTGTTGTCATCATTCTGGGAGCATTCGTCATCTGCTGGACGCCAGGCCAGGTTGTGCTT
CTCCTGGATGGTCTGGGCTGCAAGTCTTGCAACGTCTTGGCTGTGGAGAAGTATTTCCTACTCT
TAGCAGAGGCCAACTCACTGGTCAACGCCGTGGTGTACTCATGCCGTGATGCTGAGATGCGCCG
CACCTTCCGCCGCCTCCTCTGCTGTCTGTGCCTCCGCCAGTCTGACCACAAGTCTGTTCGCTAC
ACACCCTCCACCCAGACAGGCACAAGCACTCGCATCATGCTTCCTGAGAATGGCCATCCCCTGA
TGGACTCCACCCTTTAGCTAACCTTGGACTTCGGCAGGATAGAGCAAATGCCAGATCGCTGCCC
CTGGCCACCTGTGGCTGCACCTGGCTCTACCCAATCTGCAGGCCAGACTTAAGGCAGACCCTCA
GTCTGACATGGCACGAAACCACTGCCTGTCCCACCCAGACCCGCAACTGGGCCTGTCTTAGGCC
TAGAGATTGGAGTCATGTAAGCACCCAGGAAAGAGTTGAATGGGTGCAGGAATATGGCCCTTCA
GTCATCTCAGGCTGTAGGGCTTTTTAACAGACACTTTTCTGTTTTTACCACACATCCCTGGTAA
ACTCTGTGGACTGCTTCCTTGTCCATGGTGGTGCGGGTAATAAAGGTGGGAGAGATGAGGACTC
TCCCAGGCCACGCTGCCCAGTGCAACAGGGTAATAAGGATGGACTGCAGGTGCCCCATCTGCCT
GAGGCTGGTGGTTTAGGGGGCACAGACTGTGGAGTGGTGAGTGTGATCTGGGAAAGGTTTAAGA
CCCCTCACAGCCTCCAGGGGGTCTTGCCTATCCCCATTAGAATTGAGGAGGTCTATGAAGGGAG
TAAAAGAGTAAATCTTTCTTTCTGCTC

hide sequence

RefSeq Acc Id:

XM_005654916 ⟹ XP_005654973

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	58,296,645 - 58,300,869 (+)	NCBI

Sequence:

show sequence

GGGCAAGGGAGGCTGAGGCCCGCGGTTGCTCTGAGCCGGCAAAGCTGAGGCGGGGCTGGGGTCC
GGGCGGTGGGAGCCGGGTCGGATCAGGGCGTGGCTTGGAACTCGGCGACGGATTGGACGCGAGG
GAGCCGGCGGGGTGGGGACGGGGCGGGGGCGCGGACCCTGAGACCACCCGGAGGTGGGCCCCGG
CGGCACCAGGTCACGGCGGGAATTCTCGGGCAGCGAGTGACTCAGCCCCGCGAAGGCCCAAAAC
TGCGGGCACGTGAGATGGTCACCATGGGCCAGTGCTACTACAATGAGACCATCGGCTTCTTCTA
TAACAACAGCGGCAAAGAGCTCAGCTCCCACTGGCGGCCTAAAGATGTGGTTGTGGTGGCACTG
GGGCTGACTGTCAGTGTGCTGGTTCTGCTGACCAACCTGCTAGTCATCGCAGCCATCGCCTCCA
ACCGCCGTTTCCACCAGCCTATTTACTACCTGCTGGGCAACCTGGCTGCAGCCGACCTCTTTGC
AGGTGTAGCCTACCTCTTCCTCATGTTCCACACAGGCCCACGCACAGCCCGGCTCTCACTTCAG
GGCTGGTTCTTGCGGCAGGGCCTGTTGGATACAAGCCTGACGGCATCTGTGGCTACACTTCTGG
CCATTGCTGTGGAGCGTCACCGAAGTGTGATGGCCGTGCAGCTGCATAGCCGCCTACCACGAGG
CCGGGTCATCATGCTCATCGTGGGCGTGTGGGTGGCTGCGCTGGGCCTAGGGCTGCTGCCTGCC
CACTCCTGGCACTGCCTCTGTGCCCTGGACCGCTGCTCACGCATGGCCCCCCTGCTCAGCCGCT
CCTACCTGGCCGTCTGGGCCCTGTCCAGCTTGCTTGTCTTCCTGCTCATGGTGGCTGTCTACAC
TCGCATTTTCTTCTATGTGAGGCGGCGGGTGCAGCGCATGGCAGAGCATGTCAGCTGCCATCCC
CGCTACCGTGAAACCACACTCAGCCTGGTCAAGACTGTTGTCATCATTCTGGGAGCATTCGTCA
TCTGCTGGACGCCAGGCCAGGTTGTGCTTCTCCTGGATGGTCTGGGCTGCAAGTCTTGCAACGT
CTTGGCTGTGGAGAAGTATTTCCTACTCTTAGCAGAGGCCAACTCACTGGTCAACGCCGTGGTG
TACTCATGCCGTGATGCTGAGATGCGCCGCACCTTCCGCCGCCTCCTCTGCTGTCTGTGCCTCC
GCCAGTCTGACCACAAGTCTGTTCGCTACACACCCTCCACCCAGACAGGCACAAGCACTCGCAT
CATGCTTCCTGAGAATGGCCATCCCCTGATGGACTCCACCCTTTAGCTAACCTTGGACTTCGGC
AGGATAGAGCAAATGCCAGATCGCTGCCCCTGGCCACCTGTGGCTGCACCTGGCTCTACCCAAT
CTGCAGGCCAGACTTAAGGCAGACCCTCAGTCTGACATGGCACGAAACCACTGCCTGTCCCACC
CAGACCCGCAACTGGGCCTGTCTTAGGCCTAGAGATTGGAGTCATGTAAGCACCCAGGAAAGAG
TTGAATGGGTGCAGGAATATGGCCCTTCAGTCATCTCAGGCTGTAGGGCTTTTTAACAGACACT
TTTCTGTTTTTACCACACATCCCTGGTAAACTCTGTGGACTGCTTCCTTGTCCATGGTGGTGCG
GGTAATAAAGGTGGGAGAGATGAGGACTCTCCCAGGCCACGCTGCCCAGTGCAACAGGGTAATA
AGGATGGACTGCAGGTGCCCCATCTGCCTGAGGCTGGTGGTTTAGGGGGCACAGACTGTGGAGT
GGTGAGTGTGATCTGGGAAAGGTTTAAGACCCCTCACAGCCTCCAGGGGGTCTTGCCTATCCCC
ATTAGAATTGAGGAGGTCTATGAAGGGAGTAAAAGAGTAAATCTTTCTTTCTGCTC

hide sequence

RefSeq Acc Id:

XM_005654917 ⟹ XP_005654974

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	58,296,645 - 58,300,869 (+)	NCBI

Sequence:

show sequence

GGGCAAGGGAGGCTGAGGCCCGCGGTTGCTCTGAGCCGGCAAAGCTGAGGCGGGGCTGGGGTCC
GGGCGGTGGGAGCCGGGTCGGATCAGGGCGTGGCTTGGAACTCGGCGACGGATTGGACGCGAGG
GAGCCGGCGGGGTGGGGACGGGGCGGGGGCGCGGACCCTGAGACCACCCGGAGGTGGGCCCCGG
CGGCACCAGGTCACGGCGGGAATTCTCGGGCAGCGAGTGACTCAGCCCCGCGAAGGCCCAAAAC
TGCGGGCACGTGAGGTGTGCCGGGACTGGGGGTGGGGGTCCCGCGCCGGAAGTGGAGAGGGGCG
ACTGAGGGGCCGCGAAGCGGAGAGGAAATGAGGGATCTGCGGTTCCGGGAGACCCTGTCCTCGC
TGCGCAGCGGAAGCTGGGCTGCCTCAGATGGTCACCATGGGCCAGTGCTACTACAATGAGACCA
TCGGCTTCTTCTATAACAACAGCGGCAAAGAGCTCAGCTCCCACTGGCGGCCTAAAGATGTGGT
TGTGGTGGCACTGGGGCTGACTGTCAGTGTGCTGGTTCTGCTGACCAACCTGCTAGTCATCGCA
GCCATCGCCTCCAACCGCCGTTTCCACCAGCCTATTTACTACCTGCTGGGCAACCTGGCTGCAG
CCGACCTCTTTGCAGGTGTAGCCTACCTCTTCCTCATGTTCCACACAGGCCCACGCACAGCCCG
GCTCTCACTTCAGGGCTGGTTCTTGCGGCAGGGCCTGTTGGATACAAGCCTGACGGCATCTGTG
GCTACACTTCTGGCCATTGCTGTGGAGCGTCACCGAAGTGTGATGGCCGTGCAGCTGCATAGCC
GCCTACCACGAGGCCGGGTCATCATGCTCATCGTGGGCGTGTGGGTGGCTGCGCTGGGCCTAGG
GCTGCTGCCTGCCCACTCCTGGCACTGCCTCTGTGCCCTGGACCGCTGCTCACGCATGGCCCCC
CTGCTCAGCCGCTCCTACCTGGCCGTCTGGGCCCTGTCCAGCTTGCTTGTCTTCCTGCTCATGG
TGGCTGTCTACACTCGCATTTTCTTCTATGTGAGGCGGCGGGTGCAGCGCATGGCAGAGCATGT
CAGCTGCCATCCCCGCTACCGTGAAACCACACTCAGCCTGGTCAAGACTGTTGTCATCATTCTG
GGAGCATTCGTCATCTGCTGGACGCCAGGCCAGGTTGTGCTTCTCCTGGATGGTCTGGGCTGCA
AGTCTTGCAACGTCTTGGCTGTGGAGAAGTATTTCCTACTCTTAGCAGAGGCCAACTCACTGGT
CAACGCCGTGGTGTACTCATGCCGTGATGCTGAGATGCGCCGCACCTTCCGCCGCCTCCTCTGC
TGTCTGTGCCTCCGCCAGTCTGACCACAAGTCTGTTCGCTACACACCCTCCACCCAGACAGGCA
CAAGCACTCGCATCATGCTTCCTGAGAATGGCCATCCCCTGATGGACTCCACCCTTTAGCTAAC
CTTGGACTTCGGCAGGATAGAGCAAATGCCAGATCGCTGCCCCTGGCCACCTGTGGCTGCACCT
GGCTCTACCCAATCTGCAGGCCAGACTTAAGGCAGACCCTCAGTCTGACATGGCACGAAACCAC
TGCCTGTCCCACCCAGACCCGCAACTGGGCCTGTCTTAGGCCTAGAGATTGGAGTCATGTAAGC
ACCCAGGAAAGAGTTGAATGGGTGCAGGAATATGGCCCTTCAGTCATCTCAGGCTGTAGGGCTT
TTTAACAGACACTTTTCTGTTTTTACCACACATCCCTGGTAAACTCTGTGGACTGCTTCCTTGT
CCATGGTGGTGCGGGTAATAAAGGTGGGAGAGATGAGGACTCTCCCAGGCCACGCTGCCCAGTG
CAACAGGGTAATAAGGATGGACTGCAGGTGCCCCATCTGCCTGAGGCTGGTGGTTTAGGGGGCA
CAGACTGTGGAGTGGTGAGTGTGATCTGGGAAAGGTTTAAGACCCCTCACAGCCTCCAGGGGGT
CTTGCCTATCCCCATTAGAATTGAGGAGGTCTATGAAGGGAGTAAAAGAGTAAATCTTTCTTTC
TGCTC

hide sequence

RefSeq Acc Id:

XM_005654918 ⟹ XP_005654975

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	58,296,381 - 58,300,869 (+)	NCBI

Sequence:

show sequence

TCTTGAGCACCTCCAAGCAGTAGAGGCTGGGCTTGGGCACCTGGCTGAGTCACACCAGGCCAGC
CCTCCCAGAGTTCTGCGTCCCCATAATCAAACAAATATAACAAAGTGCAGATAACCGGGACAAT
AGGGCTGTGTGCTCTGGGCCGTGGGAGTCCAGGGCCGCCACAGGCGTGGGCCAGGCAGAGAACA
GCACTGCTGGGGGCGGGATTTCGAGAAACTGGAGTGCGGCCGGACAGTCAGCTGAGGCCAGAGA
GATGGTCACCATGGGCCAGTGCTACTACAATGAGACCATCGGCTTCTTCTATAACAACAGCGGC
AAAGAGCTCAGCTCCCACTGGCGGCCTAAAGATGTGGTTGTGGTGGCACTGGGGCTGACTGTCA
GTGTGCTGGTTCTGCTGACCAACCTGCTAGTCATCGCAGCCATCGCCTCCAACCGCCGTTTCCA
CCAGCCTATTTACTACCTGCTGGGCAACCTGGCTGCAGCCGACCTCTTTGCAGGTGTAGCCTAC
CTCTTCCTCATGTTCCACACAGGCCCACGCACAGCCCGGCTCTCACTTCAGGGCTGGTTCTTGC
GGCAGGGCCTGTTGGATACAAGCCTGACGGCATCTGTGGCTACACTTCTGGCCATTGCTGTGGA
GCGTCACCGAAGTGTGATGGCCGTGCAGCTGCATAGCCGCCTACCACGAGGCCGGGTCATCATG
CTCATCGTGGGCGTGTGGGTGGCTGCGCTGGGCCTAGGGCTGCTGCCTGCCCACTCCTGGCACT
GCCTCTGTGCCCTGGACCGCTGCTCACGCATGGCCCCCCTGCTCAGCCGCTCCTACCTGGCCGT
CTGGGCCCTGTCCAGCTTGCTTGTCTTCCTGCTCATGGTGGCTGTCTACACTCGCATTTTCTTC
TATGTGAGGCGGCGGGTGCAGCGCATGGCAGAGCATGTCAGCTGCCATCCCCGCTACCGTGAAA
CCACACTCAGCCTGGTCAAGACTGTTGTCATCATTCTGGGAGCATTCGTCATCTGCTGGACGCC
AGGCCAGGTTGTGCTTCTCCTGGATGGTCTGGGCTGCAAGTCTTGCAACGTCTTGGCTGTGGAG
AAGTATTTCCTACTCTTAGCAGAGGCCAACTCACTGGTCAACGCCGTGGTGTACTCATGCCGTG
ATGCTGAGATGCGCCGCACCTTCCGCCGCCTCCTCTGCTGTCTGTGCCTCCGCCAGTCTGACCA
CAAGTCTGTTCGCTACACACCCTCCACCCAGACAGGCACAAGCACTCGCATCATGCTTCCTGAG
AATGGCCATCCCCTGATGGACTCCACCCTTTAGCTAACCTTGGACTTCGGCAGGATAGAGCAAA
TGCCAGATCGCTGCCCCTGGCCACCTGTGGCTGCACCTGGCTCTACCCAATCTGCAGGCCAGAC
TTAAGGCAGACCCTCAGTCTGACATGGCACGAAACCACTGCCTGTCCCACCCAGACCCGCAACT
GGGCCTGTCTTAGGCCTAGAGATTGGAGTCATGTAAGCACCCAGGAAAGAGTTGAATGGGTGCA
GGAATATGGCCCTTCAGTCATCTCAGGCTGTAGGGCTTTTTAACAGACACTTTTCTGTTTTTAC
CACACATCCCTGGTAAACTCTGTGGACTGCTTCCTTGTCCATGGTGGTGCGGGTAATAAAGGTG
GGAGAGATGAGGACTCTCCCAGGCCACGCTGCCCAGTGCAACAGGGTAATAAGGATGGACTGCA
GGTGCCCCATCTGCCTGAGGCTGGTGGTTTAGGGGGCACAGACTGTGGAGTGGTGAGTGTGATC
TGGGAAAGGTTTAAGACCCCTCACAGCCTCCAGGGGGTCTTGCCTATCCCCATTAGAATTGAGG
AGGTCTATGAAGGGAGTAAAAGAGTAAATCTTTCTTTCTGCTC

hide sequence

Protein Sequences


Protein RefSeqs	NP_001155873	(Get FASTA)	NCBI Sequence Viewer
	XP_005654972	(Get FASTA)	NCBI Sequence Viewer
	XP_005654973	(Get FASTA)	NCBI Sequence Viewer
	XP_005654974	(Get FASTA)	NCBI Sequence Viewer
	XP_005654975	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	ABM79755	(Get FASTA)	NCBI Sequence Viewer
	ABU41236	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000036245
	ENSSSCP00000036245.1
	ENSSSCP00015034826.1
	ENSSSCP00025010102.1
	ENSSSCP00030038652.1
	ENSSSCP00035033873.1
	ENSSSCP00040042457.1
	ENSSSCP00045006084.1
	ENSSSCP00050042268.1
	ENSSSCP00055030448.1
	ENSSSCP00060028857.1
	ENSSSCP00065013334.1
	ENSSSCP00070022700.1

RefSeq Acc Id:	XP_005654975 ⟸ XM_005654918
- Peptide Label:	isoform X1
- UniProtKB:	A0A286ZX94 (UniProtKB/TrEMBL), A0A4X1U1Q6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVTMGQCYYNETIGFFYNNSGKELSSHWRPKDVVVVALGLTVSVLVLLTNLLVIAAIASNRRFH QPIYYLLGNLAAADLFAGVAYLFLMFHTGPRTARLSLQGWFLRQGLLDTSLTASVATLLAIAVE RHRSVMAVQLHSRLPRGRVIMLIVGVWVAALGLGLLPAHSWHCLCALDRCSRMAPLLSRSYLAV WALSSLLVFLLMVAVYTRIFFYVRRRVQRMAEHVSCHPRYRETTLSLVKTVVIILGAFVICWTP GQVVLLLDGLGCKSCNVLAVEKYFLLLAEANSLVNAVVYSCRDAEMRRTFRRLLCCLCLRQSDH KSVRYTPSTQTGTSTRIMLPENGHPLMDSTL hide sequence

RefSeq Acc Id:	XP_005654974 ⟸ XM_005654917
- Peptide Label:	isoform X1
- UniProtKB:	A0A286ZX94 (UniProtKB/TrEMBL), A0A4X1U1Q6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVTMGQCYYNETIGFFYNNSGKELSSHWRPKDVVVVALGLTVSVLVLLTNLLVIAAIASNRRFH QPIYYLLGNLAAADLFAGVAYLFLMFHTGPRTARLSLQGWFLRQGLLDTSLTASVATLLAIAVE RHRSVMAVQLHSRLPRGRVIMLIVGVWVAALGLGLLPAHSWHCLCALDRCSRMAPLLSRSYLAV WALSSLLVFLLMVAVYTRIFFYVRRRVQRMAEHVSCHPRYRETTLSLVKTVVIILGAFVICWTP GQVVLLLDGLGCKSCNVLAVEKYFLLLAEANSLVNAVVYSCRDAEMRRTFRRLLCCLCLRQSDH KSVRYTPSTQTGTSTRIMLPENGHPLMDSTL hide sequence

RefSeq Acc Id:	XP_005654973 ⟸ XM_005654916
- Peptide Label:	isoform X1
- UniProtKB:	A0A286ZX94 (UniProtKB/TrEMBL), A0A4X1U1Q6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVTMGQCYYNETIGFFYNNSGKELSSHWRPKDVVVVALGLTVSVLVLLTNLLVIAAIASNRRFH QPIYYLLGNLAAADLFAGVAYLFLMFHTGPRTARLSLQGWFLRQGLLDTSLTASVATLLAIAVE RHRSVMAVQLHSRLPRGRVIMLIVGVWVAALGLGLLPAHSWHCLCALDRCSRMAPLLSRSYLAV WALSSLLVFLLMVAVYTRIFFYVRRRVQRMAEHVSCHPRYRETTLSLVKTVVIILGAFVICWTP GQVVLLLDGLGCKSCNVLAVEKYFLLLAEANSLVNAVVYSCRDAEMRRTFRRLLCCLCLRQSDH KSVRYTPSTQTGTSTRIMLPENGHPLMDSTL hide sequence

RefSeq Acc Id:	XP_005654972 ⟸ XM_005654915
- Peptide Label:	isoform X1
- UniProtKB:	A0A286ZX94 (UniProtKB/TrEMBL), A0A4X1U1Q6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVTMGQCYYNETIGFFYNNSGKELSSHWRPKDVVVVALGLTVSVLVLLTNLLVIAAIASNRRFH QPIYYLLGNLAAADLFAGVAYLFLMFHTGPRTARLSLQGWFLRQGLLDTSLTASVATLLAIAVE RHRSVMAVQLHSRLPRGRVIMLIVGVWVAALGLGLLPAHSWHCLCALDRCSRMAPLLSRSYLAV WALSSLLVFLLMVAVYTRIFFYVRRRVQRMAEHVSCHPRYRETTLSLVKTVVIILGAFVICWTP GQVVLLLDGLGCKSCNVLAVEKYFLLLAEANSLVNAVVYSCRDAEMRRTFRRLLCCLCLRQSDH KSVRYTPSTQTGTSTRIMLPENGHPLMDSTL hide sequence

RefSeq Acc Id:

NP_001155873 ⟸ NM_001162401

- UniProtKB:

C5G5X6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MVTMGQCYYNETIGFFYNNSGKELSSHWRPKDVVVVALGLTVSVLVLLTNLLVIAAIASNRRFH
QPIYYLLGNLAAADLFAGVAYLFLMFHTGPRTARLSLQGWFLRQGLLDTSLTASVATLLAIAVE
RHRSVMAVQLHSRLPRGRVIMLIVGVWVAALGLGLLPARSWHCLCALDRCSRMAPLLSRSYLAV
WALSSLLVFLLMVAVYTRIFFYVRRRVQRMAEHVSCHPRYRETTLSLVKTVVIILGAFVICWTP
GQVVLLLDGLGCKSCNVLAVEKYFLLLAEANSLVNAVVYSCRDAEMRRTFRRLLCCLCLRQSDH
KSVRYTPSTQTGTSTRIMLPENGHPLMDSTL

hide sequence

RefSeq Acc Id:

ENSSSCP00000036245 ⟸ ENSSSCT00000038879

Protein Domains

G-protein coupled receptors family 1 profile

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000013932	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015063922	UniProtKB/TrEMBL
	ENSSSCG00025017683	UniProtKB/TrEMBL
	ENSSSCG00030060207	UniProtKB/TrEMBL
	ENSSSCG00035060900	UniProtKB/TrEMBL
	ENSSSCG00040069816	UniProtKB/TrEMBL
	ENSSSCG00045005402	UniProtKB/TrEMBL
	ENSSSCG00050071799	UniProtKB/TrEMBL
	ENSSSCG00055019590	UniProtKB/TrEMBL
	ENSSSCG00060049588	UniProtKB/TrEMBL
	ENSSSCG00065024291	UniProtKB/TrEMBL
	ENSSSCG00070013946	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000038879	ENTREZGENE
	ENSSSCT00000038879.2	UniProtKB/TrEMBL
	ENSSSCT00015085684.1	UniProtKB/TrEMBL
	ENSSSCT00025023967.1	UniProtKB/TrEMBL
	ENSSSCT00030084075.1	UniProtKB/TrEMBL
	ENSSSCT00035081786.1	UniProtKB/TrEMBL
	ENSSSCT00040095751.1	UniProtKB/TrEMBL
	ENSSSCT00045008955.1	UniProtKB/TrEMBL
	ENSSSCT00050097967.1	UniProtKB/TrEMBL
	ENSSSCT00055038324.1	UniProtKB/TrEMBL
	ENSSSCT00060067345.1	UniProtKB/TrEMBL
	ENSSSCT00065032417.1	UniProtKB/TrEMBL
	ENSSSCT00070027298.1	UniProtKB/TrEMBL
Gene3D-CATH	Rhodopsin 7-helix transmembrane proteins	UniProtKB/TrEMBL
InterPro	GPCR_Rhodpsn	UniProtKB/TrEMBL
	GPCR_Rhodpsn_7TM	UniProtKB/TrEMBL
	LPA_rcpt	UniProtKB/TrEMBL
	LPA_rcpt_EDG4	UniProtKB/TrEMBL
KEGG Report	ssc:100038015	UniProtKB/TrEMBL
NCBI Gene	LPAR2	ENTREZGENE
PANTHER	G-PROTEIN COUPLED RECEPTOR	UniProtKB/TrEMBL
	LYSOPHOSPHATIDIC ACID RECEPTOR 2	UniProtKB/TrEMBL
Pfam	7tm_1	UniProtKB/TrEMBL
PRINTS	EDG4RECEPTOR	UniProtKB/TrEMBL
	GPCRRHODOPSN	UniProtKB/TrEMBL
	LPARECEPTOR	UniProtKB/TrEMBL
PROSITE	G_PROTEIN_RECEP_F1_1	UniProtKB/TrEMBL
	G_PROTEIN_RECEP_F1_2	UniProtKB/TrEMBL
SMART	7TM_GPCR_Srsx	UniProtKB/TrEMBL
Superfamily-SCOP	Family A G protein-coupled receptor-like	UniProtKB/TrEMBL
UniProt	A0A286ZX94	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1U1Q6	ENTREZGENE, UniProtKB/TrEMBL
	C5G5X6	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:89784	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar