MAU2 (MAU2 sister chromatid cohesion factor) - Rat Genome Database

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Gene: MAU2 (MAU2 sister chromatid cohesion factor) Sus scrofa
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Symbol: MAU2
Name: MAU2 sister chromatid cohesion factor
RGD ID: 14179233
Description: ENCODES a protein that exhibits protein N-terminus binding (inferred); INVOLVED IN cohesin loading (inferred); maintenance of mitotic sister chromatid cohesion (inferred); mitotic sister chromatid cohesion (inferred); FOUND IN nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: MAU2 chromatid cohesion factor homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl258,536,642 - 58,574,226 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1258,536,414 - 58,574,248 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
MAU2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl258,536,642 - 58,574,226 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1258,536,414 - 58,574,248 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
MAU2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1919,320,829 - 19,358,754 (+)EnsemblGRCh38hg38GRCh38
GRCh381919,320,607 - 19,358,754 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371919,431,638 - 19,469,563 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361919,292,630 - 19,330,563 (+)NCBINCBI36hg18NCBI36
Celera1919,335,703 - 19,373,641 (+)NCBI
Cytogenetic Map19p13.11NCBI
HuRef1918,994,938 - 19,032,220 (+)NCBIHuRef
CHM1_11919,432,396 - 19,470,333 (+)NCBICHM1_1
Mau2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39870,465,896 - 70,495,384 (-)NCBIGRCm39mm39
GRCm39 Ensembl870,468,773 - 70,495,384 (-)Ensembl
GRCm38870,014,527 - 70,042,734 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl870,016,123 - 70,042,734 (-)EnsemblGRCm38mm10GRCm38
MGSCv37872,540,022 - 72,566,633 (-)NCBIGRCm37mm9NCBIm37
MGSCv36872,947,571 - 72,971,723 (-)NCBImm8
Celera872,576,416 - 72,603,020 (-)NCBICelera
Cytogenetic Map8B3.3NCBI
Mau2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21619,383,847 - 19,414,996 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl1619,383,492 - 19,408,727 (+)Ensembl
Rnor_6.01621,132,115 - 21,163,257 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1621,132,147 - 21,163,257 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01621,047,433 - 21,078,542 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41619,867,097 - 19,895,132 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11619,867,127 - 19,892,846 (+)NCBI
Celera1619,572,963 - 19,604,071 (+)NCBICelera
Cytogenetic Map16p14NCBI
Mau2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555242,539,623 - 2,563,625 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555242,539,623 - 2,563,627 (-)NCBIChiLan1.0ChiLan1.0
MAU2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11919,762,540 - 19,799,706 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1919,762,540 - 19,799,706 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01918,758,730 - 18,796,736 (+)NCBIMhudiblu_PPA_v0panPan3
MAU2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12043,863,996 - 43,891,442 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2043,866,660 - 43,891,450 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2043,781,134 - 43,808,586 (-)NCBI
ROS_Cfam_1.02044,351,862 - 44,379,323 (-)NCBI
UMICH_Zoey_3.12043,589,373 - 43,616,840 (-)NCBI
UNSW_CanFamBas_1.02043,998,996 - 44,026,439 (-)NCBI
UU_Cfam_GSD_1.02044,274,237 - 44,301,693 (-)NCBI
Mau2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118202,548,182 - 202,583,821 (-)NCBI
SpeTri2.0NW_0049365962,097,323 - 2,132,967 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAU2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1617,784,455 - 17,820,270 (+)NCBI
ChlSab1.1 Ensembl617,784,489 - 17,817,285 (+)Ensembl
Vero_WHO_p1.0NW_0236660741,486,597 - 1,522,384 (-)NCBI
Mau2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046249082,165,178 - 2,202,028 (+)NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 7 2 3 5 2 9 2 3 3
Low 3 2 14
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000032349   ⟹   ENSSSCP00000023334
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl258,536,642 - 58,574,201 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000046621   ⟹   ENSSSCP00000035247
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl258,536,646 - 58,574,205 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000056397   ⟹   ENSSSCP00000032043
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl258,536,645 - 58,574,226 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000063988   ⟹   ENSSSCP00000056200
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl258,537,295 - 58,574,198 (-)Ensembl
RefSeq Acc Id: XM_021083430   ⟹   XP_020939089
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1258,536,414 - 58,574,248 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021083431   ⟹   XP_020939090
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1258,536,414 - 58,574,235 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_020939089 (Get FASTA)   NCBI Sequence Viewer  
  XP_020939090 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein JAG69380 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_020939089   ⟸   XM_021083430
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_020939090   ⟸   XM_021083431
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSSSCP00000035247   ⟸   ENSSSCT00000046621
RefSeq Acc Id: ENSSSCP00000023334   ⟸   ENSSSCT00000032349
RefSeq Acc Id: ENSSSCP00000032043   ⟸   ENSSSCT00000056397
RefSeq Acc Id: ENSSSCP00000056200   ⟸   ENSSSCT00000063988
Protein Domains
TPR_REGION


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000021664 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00070014089 UniProtKB/TrEMBL
Ensembl Protein ENSSSCP00000023334 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00000032043 UniProtKB/TrEMBL
  ENSSSCP00000035247 UniProtKB/TrEMBL
  ENSSSCP00000056200 UniProtKB/TrEMBL
  ENSSSCP00070022943 UniProtKB/TrEMBL
  ENSSSCP00070022959 UniProtKB/TrEMBL
  ENSSSCP00070022976 UniProtKB/TrEMBL
  ENSSSCP00070022994 UniProtKB/TrEMBL
  ENSSSCP00070023002 UniProtKB/TrEMBL
  ENSSSCP00070023013 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000032349 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCT00000046621 UniProtKB/TrEMBL
  ENSSSCT00000056397 UniProtKB/TrEMBL
  ENSSSCT00000063988 UniProtKB/TrEMBL
  ENSSSCT00070027577 UniProtKB/TrEMBL
  ENSSSCT00070027592 UniProtKB/TrEMBL
  ENSSSCT00070027612 UniProtKB/TrEMBL
  ENSSSCT00070027630 UniProtKB/TrEMBL
  ENSSSCT00070027639 UniProtKB/TrEMBL
  ENSSSCT00070027655 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.10 UniProtKB/TrEMBL
InterPro MAU2 UniProtKB/TrEMBL
  TPR-contain_dom UniProtKB/TrEMBL
  TPR-like_helical_dom_sf UniProtKB/TrEMBL
  TPR_repeat UniProtKB/TrEMBL
NCBI Gene MAU2 ENTREZGENE
PANTHER PTHR21394 UniProtKB/TrEMBL
Pfam Cohesin_load UniProtKB/TrEMBL
PROSITE TPR_REGION UniProtKB/TrEMBL
SMART TPR UniProtKB/TrEMBL
Superfamily-SCOP SSF48452 UniProtKB/TrEMBL
UniProt A0A286ZKE5_PIG UniProtKB/TrEMBL
  A0A286ZUT4_PIG UniProtKB/TrEMBL
  A0A287BHX6_PIG UniProtKB/TrEMBL
  A0A4X1TZR1_PIG UniProtKB/TrEMBL
  A0A4X1TZS7_PIG UniProtKB/TrEMBL
  A0A4X1TZV4_PIG UniProtKB/TrEMBL
  A0A4X1TZW3_PIG UniProtKB/TrEMBL
  A0A4X1U2I3_PIG UniProtKB/TrEMBL
  A0A4X1U555_PIG UniProtKB/TrEMBL
  I3LGZ0_PIG UniProtKB/TrEMBL
VGNC ID VGNC:90045 ENTREZGENE