MOCS2 (molybdenum cofactor synthesis 2) - Rat Genome Database

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Gene: MOCS2 (molybdenum cofactor synthesis 2) Sus scrofa
Analyze
Symbol: MOCS2
Name: molybdenum cofactor synthesis 2
RGD ID: 14178459
Description: ENCODES a protein that exhibits identical protein binding (ortholog); molybdopterin synthase activity (ortholog); INVOLVED IN Mo-molybdopterin cofactor biosynthetic process (inferred); molybdopterin cofactor biosynthetic process (inferred); PARTICIPATES IN molybdenum cofactor biosynthetic pathway; ASSOCIATED WITH genetic disease (ortholog); molybdenum cofactor deficiency (ortholog); molybdenum cofactor deficiency type A (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); molybdopterin synthase complex (inferred)
Type: protein-coding
RefSeq Status: VALIDATED
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1632,436,205 - 32,462,521 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11632,427,783 - 32,462,362 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21634,270,548 - 34,290,713 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:14681463   PMID:15679890   PMID:17145712   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
MOCS2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1632,436,205 - 32,462,521 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11632,427,783 - 32,462,362 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21634,270,548 - 34,290,713 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MOCS2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38553,095,679 - 53,109,757 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl553,095,679 - 53,110,063 (-)EnsemblGRCh38hg38GRCh38
GRCh37552,391,509 - 52,405,587 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36552,429,649 - 52,441,355 (-)NCBINCBI36Build 36hg18NCBI36
Build 34552,429,653 - 52,441,355NCBI
Celera549,347,470 - 49,359,176 (-)NCBICelera
Cytogenetic Map5q11.2NCBI
HuRef549,363,558 - 49,377,653 (-)NCBIHuRef
CHM1_1552,394,058 - 52,408,152 (-)NCBICHM1_1
T2T-CHM13v2.0553,923,465 - 53,937,543 (-)NCBIT2T-CHM13v2.0
Mocs2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3913114,954,707 - 114,965,960 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl13114,954,772 - 114,968,811 (+)EnsemblGRCm39 Ensembl
GRCm3813114,818,160 - 114,829,420 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl13114,818,236 - 114,832,275 (+)EnsemblGRCm38mm10GRCm38
MGSCv3713115,608,445 - 115,619,628 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3613115,939,164 - 115,949,607 (+)NCBIMGSCv36mm8
Celera13119,161,937 - 119,173,119 (+)NCBICelera
Cytogenetic Map13D2.2NCBI
cM Map1364.61NCBI
Mocs2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8248,237,655 - 48,249,394 (+)NCBIGRCr8
mRatBN7.2246,504,588 - 46,516,327 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl246,504,588 - 46,516,324 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx253,614,202 - 53,625,948 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0251,672,578 - 51,684,324 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0246,540,417 - 46,552,139 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0246,980,964 - 46,992,886 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl246,980,976 - 46,992,883 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0271,520,174 - 71,532,084 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4246,948,321 - 46,960,060 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1246,876,587 - 46,888,290 (+)NCBI
Celera242,260,839 - 42,272,490 (+)NCBICelera
Cytogenetic Map2q14NCBI
Mocs2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544614,295,737 - 14,307,838 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544614,295,737 - 14,305,735 (+)NCBIChiLan1.0ChiLan1.0
MOCS2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2460,831,376 - 60,843,005 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1558,984,997 - 58,996,220 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0560,920,268 - 60,931,990 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1562,539,208 - 62,550,926 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl562,539,214 - 62,550,921 (+)Ensemblpanpan1.1panPan2
MOCS2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1462,153,828 - 62,164,154 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl462,153,296 - 62,185,492 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha461,928,792 - 61,939,117 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0462,651,866 - 62,662,174 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl462,652,443 - 62,665,845 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1462,427,116 - 62,437,429 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0462,551,658 - 62,561,990 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0463,078,354 - 63,088,687 (+)NCBIUU_Cfam_GSD_1.0
Mocs2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213205,369,033 - 205,380,226 (+)NCBIHiC_Itri_2
SpeTri2.0NW_00493648014,302,824 - 14,313,265 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MOCS2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1449,387,923 - 49,399,902 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl449,386,487 - 49,399,928 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660821,727,742 - 1,739,745 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mocs2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247596,261,933 - 6,271,509 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247596,261,970 - 6,272,246 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in MOCS2
900 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence


Ensembl Acc Id: ENSSSCT00000018392   ⟹   ENSSSCP00000017896
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1632,441,463 - 32,462,305 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000062923   ⟹   ENSSSCP00000031137
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1632,459,642 - 32,462,521 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000070686   ⟹   ENSSSCP00000069092
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1632,442,708 - 32,462,313 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000077011   ⟹   ENSSSCP00000068074
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1632,436,205 - 32,462,313 (-)Ensembl
Ensembl Acc Id: ENSSSCT00000084281   ⟹   ENSSSCP00000059623
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1632,436,205 - 32,462,521 (-)Ensembl
RefSeq Acc Id: NM_001244725   ⟹   NP_001231654
RefSeq Status: VALIDATED
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11632,441,866 - 32,462,291 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021076548   ⟹   XP_020932207
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11632,427,783 - 32,462,362 (-)NCBI
Sequence:
RefSeq Acc Id: XP_020932207   ⟸   XM_021076548
- Peptide Label: isoform X1
- UniProtKB: A0A4X1SQ20 (UniProtKB/TrEMBL),   F1SMF3 (UniProtKB/TrEMBL),   A0A8D0N704 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001231654   ⟸   NM_001244725
- UniProtKB: A0A481BJY8 (UniProtKB/TrEMBL),   A0A4X1SNL9 (UniProtKB/TrEMBL),   A0A8D0W125 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000059623   ⟸   ENSSSCT00000084281
Ensembl Acc Id: ENSSSCP00000069092   ⟸   ENSSSCT00000070686
Ensembl Acc Id: ENSSSCP00000068074   ⟸   ENSSSCT00000077011
Ensembl Acc Id: ENSSSCP00000031137   ⟸   ENSSSCT00000062923
Ensembl Acc Id: ENSSSCP00000017896   ⟸   ENSSSCT00000018392


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000016888 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015025528 UniProtKB/TrEMBL
  ENSSSCG00025023130 UniProtKB/TrEMBL
  ENSSSCG00030023220 UniProtKB/TrEMBL
  ENSSSCG00035079390 UniProtKB/TrEMBL
  ENSSSCG00040031173 UniProtKB/TrEMBL
  ENSSSCG00045027783 UniProtKB/TrEMBL
  ENSSSCG00050033759 UniProtKB/TrEMBL
  ENSSSCG00055007044 UniProtKB/TrEMBL
  ENSSSCG00060032247 UniProtKB/TrEMBL
  ENSSSCG00065041758 UniProtKB/TrEMBL
  ENSSSCG00070002720 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000018392 ENTREZGENE
  ENSSSCT00000018392.4 UniProtKB/TrEMBL
  ENSSSCT00000062923.3 UniProtKB/TrEMBL
  ENSSSCT00000070686.1 UniProtKB/TrEMBL
  ENSSSCT00000077011 ENTREZGENE
  ENSSSCT00000077011.1 UniProtKB/TrEMBL
  ENSSSCT00015033902.1 UniProtKB/TrEMBL
  ENSSSCT00015034010.1 UniProtKB/TrEMBL
  ENSSSCT00015034186.1 UniProtKB/TrEMBL
  ENSSSCT00015034231.1 UniProtKB/TrEMBL
  ENSSSCT00025031357.1 UniProtKB/TrEMBL
  ENSSSCT00025031374.1 UniProtKB/TrEMBL
  ENSSSCT00025031407.1 UniProtKB/TrEMBL
  ENSSSCT00025031423.1 UniProtKB/TrEMBL
  ENSSSCT00030032278.1 UniProtKB/TrEMBL
  ENSSSCT00030032326.1 UniProtKB/TrEMBL
  ENSSSCT00030032334.1 UniProtKB/TrEMBL
  ENSSSCT00030032342.1 UniProtKB/TrEMBL
  ENSSSCT00035108563.1 UniProtKB/TrEMBL
  ENSSSCT00035108615.1 UniProtKB/TrEMBL
  ENSSSCT00035108680.1 UniProtKB/TrEMBL
  ENSSSCT00035108712.1 UniProtKB/TrEMBL
  ENSSSCT00040041944.1 UniProtKB/TrEMBL
  ENSSSCT00040041973.1 UniProtKB/TrEMBL
  ENSSSCT00040042033.1 UniProtKB/TrEMBL
  ENSSSCT00040042057.1 UniProtKB/TrEMBL
  ENSSSCT00045047390.1 UniProtKB/TrEMBL
  ENSSSCT00045047480.1 UniProtKB/TrEMBL
  ENSSSCT00045047563.1 UniProtKB/TrEMBL
  ENSSSCT00045047621.1 UniProtKB/TrEMBL
  ENSSSCT00050045250.1 UniProtKB/TrEMBL
  ENSSSCT00050045262.1 UniProtKB/TrEMBL
  ENSSSCT00050045276.1 UniProtKB/TrEMBL
  ENSSSCT00050045277.1 UniProtKB/TrEMBL
  ENSSSCT00055013694.1 UniProtKB/TrEMBL
  ENSSSCT00055013744.1 UniProtKB/TrEMBL
  ENSSSCT00055013789.1 UniProtKB/TrEMBL
  ENSSSCT00055013830.1 UniProtKB/TrEMBL
  ENSSSCT00060043677.1 UniProtKB/TrEMBL
  ENSSSCT00060043679.1 UniProtKB/TrEMBL
  ENSSSCT00060043688.1 UniProtKB/TrEMBL
  ENSSSCT00060043695.1 UniProtKB/TrEMBL
  ENSSSCT00065057143.1 UniProtKB/TrEMBL
  ENSSSCT00065057146.1 UniProtKB/TrEMBL
  ENSSSCT00065057154.1 UniProtKB/TrEMBL
  ENSSSCT00065057159.1 UniProtKB/TrEMBL
  ENSSSCT00070005091.1 UniProtKB/TrEMBL
  ENSSSCT00070005123.1 UniProtKB/TrEMBL
Gene3D-CATH 3.10.20.30 UniProtKB/TrEMBL
  3.90.1170.40 UniProtKB/TrEMBL
InterPro Beta-grasp_dom_sf UniProtKB/TrEMBL
  MoaE_sf UniProtKB/TrEMBL
  MOCS2A UniProtKB/TrEMBL
  MOCS2A UniProtKB/TrEMBL
  MOCS2B_euk UniProtKB/TrEMBL
  Mopterin_biosynth_MoaE UniProtKB/TrEMBL
  Mopterin_synth/thiamin_S_b UniProtKB/TrEMBL
  ThiS/MoaD-like UniProtKB/TrEMBL
NCBI Gene MOCS2 ENTREZGENE
PANTHER MOLYBDOPTERIN SYNTHASE CATALYTIC SUBUNIT UniProtKB/TrEMBL
  MOLYBDOPTERIN SYNTHASE RELATED UniProtKB/TrEMBL
  MOLYBDOPTERIN SYNTHASE SULFUR CARRIER SUBUNIT UniProtKB/TrEMBL
  PTHR33359 UniProtKB/TrEMBL
Pfam MoaE UniProtKB/TrEMBL
  ThiS UniProtKB/TrEMBL
Superfamily-SCOP SSF54285 UniProtKB/TrEMBL
  SSF54690 UniProtKB/TrEMBL
UniProt A0A481BJY8 ENTREZGENE
  A0A4X1SNL9 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1SQ20 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0N636_PIG UniProtKB/TrEMBL
  A0A8D0N678_PIG UniProtKB/TrEMBL
  A0A8D0N704 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0W125 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1E8A4_PIG UniProtKB/TrEMBL
  A0A8D1IFP2_PIG UniProtKB/TrEMBL
  A0A8D1K8K1_PIG UniProtKB/TrEMBL
  A0A8D1V356_PIG UniProtKB/TrEMBL
  F1SMF3 ENTREZGENE
UniProt Secondary A0A286ZHX5 UniProtKB/TrEMBL
  A0A481BJY8 UniProtKB/TrEMBL
  A0A5G2Q6K7 UniProtKB/TrEMBL
  A0A5G2RE50 UniProtKB/TrEMBL
  F1SMF3 UniProtKB/TrEMBL
VGNC ID VGNC:90295 ENTREZGENE