IPPK (inositol-pentakisphosphate 2-kinase) - Rat Genome Database

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Gene: IPPK (inositol-pentakisphosphate 2-kinase) Sus scrofa
Analyze
Symbol: IPPK
Name: inositol-pentakisphosphate 2-kinase
RGD ID: 14171293
Description: ENCODES a protein that exhibits ATP binding (inferred); inositol pentakisphosphate 2-kinase activity (inferred); molecular adaptor activity (inferred); INVOLVED IN inositol phosphorylation (inferred); phosphorylation (inferred); positive regulation of transcription of nucleolar large rRNA by RNA polymerase I (inferred); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; FOUND IN nucleolus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Also known as: inositol 1,3,4,5,6-pentakisphosphate 2-kinase
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl342,308,005 - 42,368,224 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1342,308,001 - 42,368,162 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2343,492,552 - 43,500,085 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
nucleolus  (IEA)
nucleus  (IBA)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
IPPK
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl342,308,005 - 42,368,224 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1342,308,001 - 42,368,162 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2343,492,552 - 43,500,085 (-)NCBISscrofa10.2Sscrofa10.2susScr3
IPPK
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl992,613,183 - 92,670,131 (-)EnsemblGRCh38hg38GRCh38
GRCh38992,613,183 - 92,670,259 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37995,375,465 - 95,432,413 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36994,415,287 - 94,472,368 (-)NCBINCBI36hg18NCBI36
Build 34992,455,020 - 92,512,102NCBI
Celera965,817,524 - 65,874,595 (-)NCBI
Cytogenetic Map9q22.31NCBI
HuRef965,053,819 - 65,110,851 (-)NCBIHuRef
CHM1_1995,521,868 - 95,578,933 (-)NCBICHM1_1
Ippk
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391349,574,673 - 49,618,050 (+)NCBIGRCm39mm39
GRCm39 Ensembl1349,574,725 - 49,618,049 (+)Ensembl
GRCm381349,421,198 - 49,464,574 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1349,421,249 - 49,464,573 (+)EnsemblGRCm38mm10GRCm38
MGSCv371349,516,680 - 49,558,359 (+)NCBIGRCm37mm9NCBIm37
MGSCv361349,433,248 - 49,474,927 (+)NCBImm8
Celera1350,510,826 - 50,552,610 (+)NCBICelera
Cytogenetic Map13A5NCBI
Ippk
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21715,190,191 - 15,235,203 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1715,190,265 - 15,229,541 (-)Ensembl
Rnor_6.01715,604,148 - 15,643,312 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1715,604,145 - 15,643,489 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01717,662,547 - 17,701,642 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41721,147,481 - 21,185,525 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11721,147,480 - 21,185,525 (-)NCBI
Celera1714,922,371 - 14,960,214 (-)NCBICelera
Cytogenetic Map17p14NCBI
Ippk
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555155,170,164 - 5,219,130 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555155,170,164 - 5,219,130 (+)NCBIChiLan1.0ChiLan1.0
IPPK
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1991,808,757 - 91,864,773 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl991,808,757 - 91,864,773 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0963,737,324 - 63,793,348 (-)NCBIMhudiblu_PPA_v0panPan3
IPPK
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1198,760,104 - 98,800,891 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl198,759,976 - 98,800,833 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha199,153,945 - 99,194,737 (+)NCBI
ROS_Cfam_1.0199,376,891 - 99,417,695 (+)NCBI
UMICH_Zoey_3.1198,989,996 - 99,030,788 (+)NCBI
UNSW_CanFamBas_1.0198,725,536 - 98,766,275 (+)NCBI
UU_Cfam_GSD_1.0199,481,198 - 99,521,965 (+)NCBI
Ippk
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049447,984,122 - 8,037,682 (-)NCBI
SpeTri2.0NW_0049364872,200,588 - 2,254,130 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IPPK
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.112103,122,293 - 103,184,453 (-)NCBI
ChlSab1.1 Ensembl12103,123,557 - 103,184,174 (-)Ensembl
Vero_WHO_p1.0NW_02366603891,394,542 - 91,456,260 (-)NCBI
Ippk
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248683,722,713 - 3,781,639 (+)NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium
Low 10 4 3 5 2 23 2 3 3
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000008849   ⟹   ENSSSCP00000008625
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl342,308,005 - 42,368,224 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000025658   ⟹   ENSSSCP00000023611
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl342,308,008 - 42,368,116 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000084703   ⟹   ENSSSCP00000074277
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl342,309,496 - 42,368,124 (-)Ensembl
RefSeq Acc Id: XM_013995782   ⟹   XP_013851236
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1342,308,001 - 42,368,157 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002342482
RefSeq Status:
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1342,308,001 - 42,368,157 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002342483
RefSeq Status:
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1342,308,001 - 42,368,162 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013851236 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013851236   ⟸   XM_013995782
- Sequence:
RefSeq Acc Id: ENSSSCP00000023611   ⟸   ENSSSCT00000025658
RefSeq Acc Id: ENSSSCP00000074277   ⟸   ENSSSCT00000084703
RefSeq Acc Id: ENSSSCP00000008625   ⟸   ENSSSCT00000008849


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000030204 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00070014278 UniProtKB/TrEMBL
Ensembl Protein ENSSSCP00000008625 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00000023611 UniProtKB/TrEMBL
  ENSSSCP00000074277 UniProtKB/TrEMBL
  ENSSSCP00070023975 UniProtKB/TrEMBL
  ENSSSCP00070024015 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000008849 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCT00000025658 UniProtKB/TrEMBL
  ENSSSCT00000084703 UniProtKB/TrEMBL
  ENSSSCT00070028766 UniProtKB/TrEMBL
  ENSSSCT00070028815 UniProtKB/TrEMBL
Gene3D-CATH 3.30.200.110 UniProtKB/TrEMBL
InterPro Ins_P5_2-kin UniProtKB/TrEMBL
  IP5_2-K_N UniProtKB/TrEMBL
NCBI Gene IPPK ENTREZGENE
PANTHER PTHR14456 UniProtKB/TrEMBL
Pfam Ins_P5_2-kin UniProtKB/TrEMBL
UniProt A0A4X1U563_PIG UniProtKB/TrEMBL
  A0A4X1U5A6_PIG UniProtKB/TrEMBL
  A0A5G2RB91_PIG UniProtKB/TrEMBL
  F1SUD9_PIG UniProtKB/TrEMBL
  I3LHR4_PIG UniProtKB/TrEMBL
VGNC ID VGNC:89183 ENTREZGENE