LOC102161780 (SLAM family member 9-like) - Rat Genome Database

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Gene: LOC102161780 (SLAM family member 9-like) Sus scrofa
Analyze
Symbol: LOC102161780
Name: SLAM family member 9-like
RGD ID: 14166305
Description: FOUND IN membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: uncharacterized protein LOC102161780
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1492,808,788 - 92,821,202 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24101,164,844 - 101,177,929 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)

References

Genomics

Variants

.
Variants in LOC102161780
155 total Variants

Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_013996935   ⟹   XP_013852389
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1492,808,788 - 92,821,183 (-)NCBI
Sequence:
RefSeq Acc Id: XM_013996937   ⟹   XP_013852391
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1492,808,788 - 92,821,202 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021089633   ⟹   XP_020945292
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1492,808,788 - 92,821,183 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021089634   ⟹   XP_020945293
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1492,808,788 - 92,821,183 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021089635   ⟹   XP_020945294
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1492,808,788 - 92,821,183 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_013852391   ⟸   XM_013996937
- Peptide Label: isoform X4
- UniProtKB: A0A8D0I3N4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020945294   ⟸   XM_021089635
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_020945292   ⟸   XM_021089633
- Peptide Label: isoform X2
- UniProtKB: A0A5G2QWL9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013852389   ⟸   XM_013996935
- Peptide Label: isoform X1
- UniProtKB: A0A5G2QWL9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020945293   ⟸   XM_021089634
- Peptide Label: isoform X3
- UniProtKB: A0A5G2QZK7 (UniProtKB/TrEMBL),   A0A5G2QWL9 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
Ig-like


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000043115 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005004976 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000079041 ENTREZGENE
  ENSSSCT00000079041.1 UniProtKB/TrEMBL
  ENSSSCT00000086327 ENTREZGENE
  ENSSSCT00000086327.2 UniProtKB/TrEMBL
  ENSSSCT00005007400.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro Ig-like_dom UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Ig_sub UniProtKB/TrEMBL
  Ig_V-set UniProtKB/TrEMBL
NCBI Gene LOC102161780 ENTREZGENE
PANTHER SIGNALING LYMPHOCYTIC ACTIVATION MOLECULE UniProtKB/TrEMBL
  SLAM FAMILY MEMBER 9-LIKE UniProtKB/TrEMBL
Pfam V-set UniProtKB/TrEMBL
PROSITE IG_LIKE UniProtKB/TrEMBL
SMART SM00409 UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/TrEMBL
UniProt A0A5G2QWL9 ENTREZGENE, UniProtKB/TrEMBL
  A0A5G2QZK7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0I3N4 ENTREZGENE, UniProtKB/TrEMBL