COL8A1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 13 | 159,216,144 - 159,374,576 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 159,216,138 - 159,374,718 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 169,086,122 - 169,094,141 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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COL8A1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 3 | 99,638,594 - 99,799,217 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 99,638,475 - 99,799,226 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 99,357,438 - 99,518,061 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 100,840,144 - 100,997,848 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 3 | 100,840,143 - 100,997,848 | NCBI | | | | | Celera | 3 | 97,746,575 - 97,904,287 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | q12.1 | NCBI | | | | | HuRef | 3 | 96,725,773 - 96,884,050 (+) | NCBI | | HuRef | | | CHM1_1 | 3 | 99,320,440 - 99,478,624 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 102,343,632 - 102,504,274 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Col8a1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 16 | 57,444,619 - 57,575,100 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 16 | 57,444,621 - 57,575,100 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 16 | 57,624,256 - 57,754,737 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 16 | 57,624,258 - 57,754,737 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 16 | 57,624,369 - 57,754,850 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 16 | 57,548,056 - 57,553,783 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 16 | 57,949,273 - 58,079,512 (-) | NCBI | | Celera | | | Cytogenetic Map | 16 | C1.1 | NCBI | | | | | cM Map | 16 | 34.22 | NCBI | | | | |
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Col8a1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 11 | 56,245,998 - 56,378,586 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 11 | 42,776,851 - 42,906,432 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 11 | 42,777,628 - 42,906,424 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 11 | 51,533,937 - 51,662,714 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 11 | 44,195,524 - 44,324,293 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 11 | 43,324,116 - 43,452,883 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 11 | 44,877,690 - 45,006,203 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 11 | 44,877,859 - 45,007,891 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 11 | 48,073,158 - 48,201,421 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 11 | 43,604,994 - 43,733,870 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 11 | 43,785,922 - 43,791,642 (+) | NCBI | | | | | Celera | 11 | 42,573,892 - 42,702,340 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | q12 | NCBI | | | | |
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Col8a1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955427 | 1,187,550 - 1,335,794 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955427 | 1,187,550 - 1,335,794 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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COL8A1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 2 | 97,584,157 - 97,744,951 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 97,589,413 - 97,749,735 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 96,732,445 - 96,892,726 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 103,416,557 - 103,573,617 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 103,521,159 - 103,573,617 (+) | Ensembl | panpan1.1 | | panPan2 | |
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COL8A1 (Canis lupus familiaris - dog) |
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Col8a1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405602 | 150,545,175 - 150,692,760 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936630 | 3,443,068 - 3,590,516 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936630 | 3,443,085 - 3,590,430 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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COL8A1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 22 | 81,094,127 - 81,242,801 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 22 | 81,091,493 - 81,242,763 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666041 | 85,334,932 - 85,484,882 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Col8a1 (Heterocephalus glaber - naked mole-rat) |
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