REEP2 (receptor accessory protein 2) - Rat Genome Database

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Gene: REEP2 (receptor accessory protein 2) Sus scrofa
Analyze
Symbol: REEP2
Name: receptor accessory protein 2
RGD ID: 14161319
Description: ENCODES a protein that exhibits taste receptor binding (inferred); INVOLVED IN protein transport into membrane raft (ortholog); sensory perception of bitter taste (ortholog); sensory perception of sweet taste (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 31 (ortholog); familial adenomatous polyposis 1 (ortholog); genetic disease (ortholog); FOUND IN plasma membrane (ortholog); INTERACTS WITH deoxynivalenol
Type: protein-coding
RefSeq Status: MODEL
Previously known as: receptor expression-enhancing protein 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2140,420,516 - 140,427,160 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12140,420,422 - 140,427,160 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22146,132,363 - 146,137,774 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
REEP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2140,420,516 - 140,427,160 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12140,420,422 - 140,427,160 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22146,132,363 - 146,137,774 (-)NCBISscrofa10.2Sscrofa10.2susScr3
REEP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385138,439,057 - 138,446,965 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5138,439,057 - 138,446,969 (+)EnsemblGRCh38hg38GRCh38
GRCh375137,774,746 - 137,782,654 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365137,802,675 - 137,810,557 (+)NCBINCBI36Build 36hg18NCBI36
Build 345137,802,674 - 137,810,556NCBI
Celera5133,895,609 - 133,903,492 (+)NCBICelera
Cytogenetic Map5q31.2NCBI
HuRef5132,965,471 - 132,973,440 (+)NCBIHuRef
CHM1_15137,207,413 - 137,215,380 (+)NCBICHM1_1
T2T-CHM13v2.05138,965,273 - 138,973,181 (+)NCBIT2T-CHM13v2.0
Reep2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391834,973,642 - 34,980,516 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1834,973,642 - 34,980,516 (+)EnsemblGRCm39 Ensembl
GRCm381834,840,589 - 34,847,463 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1834,840,589 - 34,847,463 (+)EnsemblGRCm38mm10GRCm38
MGSCv371835,000,312 - 35,007,109 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361834,966,632 - 34,973,429 (+)NCBIMGSCv36mm8
Celera1835,294,660 - 35,301,457 (+)NCBICelera
Cytogenetic Map18B1NCBI
cM Map1818.75NCBI
Reep2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81826,712,236 - 26,721,275 (+)NCBIGRCr8
mRatBN7.21826,438,130 - 26,447,165 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1826,438,346 - 26,447,161 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1826,565,715 - 26,574,530 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01827,329,357 - 27,338,172 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01826,664,242 - 26,673,057 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01827,632,562 - 27,641,594 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1827,632,786 - 27,641,591 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01827,344,320 - 27,353,125 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1826,176,145 - 26,183,810 (+)NCBICelera
Cytogenetic Map18p12NCBI
Reep2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554182,018,891 - 2,024,456 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554182,018,891 - 2,024,545 (-)NCBIChiLan1.0ChiLan1.0
REEP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24133,714,394 - 133,722,391 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15131,854,023 - 131,861,945 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05133,819,005 - 133,826,930 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15139,949,903 - 139,957,204 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5139,949,903 - 139,959,112 (+)Ensemblpanpan1.1panPan2
REEP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11126,026,715 - 26,032,489 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1126,026,828 - 26,032,505 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1124,796,108 - 24,801,822 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01126,883,086 - 26,888,808 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1126,883,024 - 26,888,808 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11125,590,050 - 25,595,759 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01125,412,856 - 25,418,549 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01126,077,063 - 26,082,784 (+)NCBIUU_Cfam_GSD_1.0
Reep2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213154,002,847 - 154,009,633 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365317,601,728 - 7,608,696 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365317,601,869 - 7,608,658 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
REEP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12341,113,517 - 41,121,831 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2341,113,561 - 41,121,826 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603436,765,681 - 36,774,005 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Reep2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474331,226,825 - 31,235,343 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474331,226,744 - 31,233,030 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in REEP2
185 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence


Ensembl Acc Id: ENSSSCT00000015662   ⟹   ENSSSCP00000015249
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2140,420,516 - 140,427,160 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000041556   ⟹   ENSSSCP00000041019
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2140,382,870 - 140,427,160 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000054971   ⟹   ENSSSCP00000036187
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2140,422,538 - 140,427,157 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000077358   ⟹   ENSSSCP00000064522
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2140,420,579 - 140,427,156 (+)Ensembl
RefSeq Acc Id: XM_013995145   ⟹   XP_013850599
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.12140,420,422 - 140,427,160 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021084838   ⟹   XP_020940497
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.12140,420,535 - 140,427,160 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021084839   ⟹   XP_020940498
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.12140,420,523 - 140,427,160 (+)NCBI
Sequence:
RefSeq Acc Id: XP_013850599   ⟸   XM_013995145
- Peptide Label: isoform X3
- UniProtKB: A0A4X1V8D0 (UniProtKB/TrEMBL),   A0A8D0HZC0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020940498   ⟸   XM_021084839
- Peptide Label: isoform X2
- UniProtKB: A0A4X1VAG3 (UniProtKB/TrEMBL),   A0A5G2QJ84 (UniProtKB/TrEMBL),   A0A8D0SNK5 (UniProtKB/TrEMBL),   A0A8D1MFL8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020940497   ⟸   XM_021084838
- Peptide Label: isoform X1
- UniProtKB: A0A8D0HZC0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000036187   ⟸   ENSSSCT00000054971
Ensembl Acc Id: ENSSSCP00000015249   ⟸   ENSSSCT00000015662
Ensembl Acc Id: ENSSSCP00000041019   ⟸   ENSSSCT00000041556
Ensembl Acc Id: ENSSSCP00000064522   ⟸   ENSSSCT00000077358


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000014335 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015027017 UniProtKB/TrEMBL
  ENSSSCG00025056728 UniProtKB/TrEMBL
  ENSSSCG00030036741 UniProtKB/TrEMBL
  ENSSSCG00035047069 UniProtKB/TrEMBL
  ENSSSCG00040072403 UniProtKB/TrEMBL
  ENSSSCG00045036436 UniProtKB/TrEMBL
  ENSSSCG00050041015 UniProtKB/TrEMBL
  ENSSSCG00055004683 UniProtKB/TrEMBL
  ENSSSCG00060014960 UniProtKB/TrEMBL
  ENSSSCG00065061331 UniProtKB/TrEMBL
  ENSSSCG00070022504 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000015662 ENTREZGENE
  ENSSSCT00000015662.4 UniProtKB/TrEMBL
  ENSSSCT00000054971.3 UniProtKB/TrEMBL
  ENSSSCT00000077358 ENTREZGENE
  ENSSSCT00000077358.2 UniProtKB/TrEMBL
  ENSSSCT00015036226.1 UniProtKB/TrEMBL
  ENSSSCT00025079589.1 UniProtKB/TrEMBL
  ENSSSCT00030051669.1 UniProtKB/TrEMBL
  ENSSSCT00035062956.1 UniProtKB/TrEMBL
  ENSSSCT00035062991.1 UniProtKB/TrEMBL
  ENSSSCT00040100593.1 UniProtKB/TrEMBL
  ENSSSCT00040100764.1 UniProtKB/TrEMBL
  ENSSSCT00045063366.1 UniProtKB/TrEMBL
  ENSSSCT00045063405.1 UniProtKB/TrEMBL
  ENSSSCT00045063464.1 UniProtKB/TrEMBL
  ENSSSCT00045063502.1 UniProtKB/TrEMBL
  ENSSSCT00045063540.1 UniProtKB/TrEMBL
  ENSSSCT00050055680.1 UniProtKB/TrEMBL
  ENSSSCT00055009269.1 UniProtKB/TrEMBL
  ENSSSCT00055009275.1 UniProtKB/TrEMBL
  ENSSSCT00060019948.1 UniProtKB/TrEMBL
  ENSSSCT00060019953.1 UniProtKB/TrEMBL
  ENSSSCT00065084248.1 UniProtKB/TrEMBL
  ENSSSCT00070044826.1 UniProtKB/TrEMBL
  ENSSSCT00070044844.1 UniProtKB/TrEMBL
  ENSSSCT00070044850.1 UniProtKB/TrEMBL
InterPro TB2_DP1_HVA22 UniProtKB/TrEMBL
NCBI Gene REEP2 ENTREZGENE
PANTHER PTHR12300 UniProtKB/TrEMBL
  RECEPTOR EXPRESSION-ENHANCING PROTEIN 2 UniProtKB/TrEMBL
Pfam TB2_DP1_HVA22 UniProtKB/TrEMBL
UniProt A0A286ZXJ8_PIG UniProtKB/TrEMBL
  A0A4X1V8D0 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1VAG3 ENTREZGENE, UniProtKB/TrEMBL
  A0A5G2QJ84 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0HYG3_PIG UniProtKB/TrEMBL
  A0A8D0HZC0 ENTREZGENE
  A0A8D0SNK5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1JIM2_PIG UniProtKB/TrEMBL
  A0A8D1MFL8 ENTREZGENE, UniProtKB/TrEMBL
  F1RH71_PIG UniProtKB/TrEMBL
VGNC ID VGNC:92198 ENTREZGENE