SEMA4A (semaphorin 4A) - Rat Genome Database

Name: SEMA4A
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: SEMA4A (semaphorin 4A) Sus scrofa

Analyze

Symbol:

SEMA4A

Name:

semaphorin 4A

RGD ID:

14159124

Description:

ENCODES a protein that exhibits chemorepellent activity (inferred); semaphorin receptor binding (inferred); INVOLVED IN axon guidance (inferred); axonogenesis (inferred); cell differentiation (inferred); ASSOCIATED WITH Charcot-Marie-Tooth disease type 2 (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Colonic Polyps (ortholog); FOUND IN membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

semaphorin-4A

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SEMA4A (semaphorin 4A)	HGNC	EggNOG, Ensembl, NCBI, OrthoDB, Panther
Mus musculus (house mouse):	Sema4a (sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Sema4a (semaphorin 4A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Sema4a (semaphorin 4A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SEMA4A (semaphorin 4A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SEMA4A (semaphorin 4A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Sema4a (semaphorin 4A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SEMA4A (semaphorin 4A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Sema4a (semaphorin 4A)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	93,865,057 - 93,886,371 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	93,865,054 - 93,892,995 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	102,607,463 - 102,628,790 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Charcot-Marie-Tooth disease type 2 (ISO)

Chemical and Drug Induced Liver Injury (ISO)

Colonic Polyps (ISO)

colorectal cancer (ISO)

cone-rod dystrophy (ISO)

cone-rod dystrophy 10 (ISO)

fundus dystrophy (ISO)

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

immunodeficiency 42 (ISO)

MHC class II deficiency (ISO)

parathyroid carcinoma (ISO)

retinitis pigmentosa (ISO)

retinitis pigmentosa 35 (ISO)

severe congenital neutropenia 3 (ISO)

severe congenital neutropenia 5 (ISO)

Sveinsson chorioretinal atrophy (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

axon guidance (IBA,IEA)

axonogenesis (IEA)

cell differentiation (IEA)

negative chemotaxis (IBA,IEA)

negative regulation of angiogenesis (IEA)

negative regulation of axon extension involved in axon guidance (IEA)

nervous system development (IEA)

neural crest cell migration (IBA,IEA)

positive regulation of cell migration (IBA,IEA)

positive regulation of excitatory synapse assembly (IEA)

positive regulation of inhibitory synapse assembly (IEA)

regulation of cell shape (IEA)

regulation of endothelial cell migration (IEA)

semaphorin-plexin signaling pathway (IBA,IEA)

T cell differentiation involved in immune response (IEA)

T-helper 1 cell differentiation (IEA)

Cellular Component

membrane (IEA)

plasma membrane (IBA)

Molecular Function

chemorepellent activity (IBA,IEA)

protein binding (ISO)

semaphorin receptor binding (IBA,IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

SEMA4A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	93,865,057 - 93,886,371 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	93,865,054 - 93,892,995 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	102,607,463 - 102,628,790 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SEMA4A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	156,147,373 - 156,177,744 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	156,147,366 - 156,177,752 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	156,119,735 - 156,147,535 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	154,390,012 - 154,414,159 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	152,936,460 - 152,960,607	NCBI
Celera	1	129,192,724 - 129,220,533 (+)	NCBI		Celera
Cytogenetic Map	1	q22	NCBI
HuRef	1	127,481,928 - 127,509,284 (+)	NCBI		HuRef
CHM1_1	1	157,515,841 - 157,543,516 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	155,285,786 - 155,316,193 (+)	NCBI		T2T-CHM13v2.0

Sema4a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	88,343,266 - 88,368,500 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	88,343,266 - 88,368,489 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	88,435,959 - 88,461,182 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	88,435,959 - 88,461,182 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	88,239,884 - 88,265,104 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	88,521,886 - 88,541,606 (-)	NCBI		MGSCv36	mm8
Celera	3	88,475,600 - 88,501,116 (-)	NCBI		Celera
Cytogenetic Map	3	F1	NCBI
cM Map	3	38.83	NCBI

Sema4a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	176,194,248 - 176,215,752 (-)	NCBI		GRCr8
mRatBN7.2	2	173,896,432 - 173,917,903 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	173,896,439 - 173,914,442 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	181,040,481 - 181,058,509 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	179,062,844 - 179,080,872 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	173,663,030 - 173,681,029 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	187,799,568 - 187,823,014 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	187,799,568 - 187,822,997 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	207,201,920 - 207,225,358 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	180,552,405 - 180,570,359 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	180,502,513 - 180,520,465 (-)	NCBI
Celera	2	167,841,037 - 167,859,037 (-)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI

Sema4a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955545	2,316,390 - 2,342,233 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955545	2,316,402 - 2,341,873 (+)	NCBI	ChiLan1.0	ChiLan1.0

SEMA4A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	93,668,571 - 93,698,992 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	93,400,554 - 93,430,965 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	131,489,446 - 131,519,864 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	135,321,147 - 135,350,724 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	135,321,288 - 135,350,724 (+)	Ensembl	panpan1.1		panPan2

SEMA4A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	41,670,814 - 41,695,349 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	41,672,120 - 41,692,460 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	41,160,653 - 41,184,935 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	41,537,442 - 41,561,790 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	41,537,570 - 41,558,851 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	41,318,592 - 41,342,849 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	41,371,735 - 41,396,228 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	41,656,115 - 41,680,364 (-)	NCBI		UU_Cfam_GSD_1.0

Sema4a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	26,373,899 - 26,400,801 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936580	5,406,194 - 5,431,185 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936580	5,404,380 - 5,431,183 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SEMA4A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	7,684,107 - 7,716,866 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	7,683,994 - 7,708,741 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	6,978,444 - 7,011,434 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Sema4a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624885	1,470,525 - 1,495,369 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624885	1,470,666 - 1,493,634 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in SEMA4A
739 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium	6	2		5				1	3
Low	4		3			23	2	2
Below cutoff		2			2

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021089684	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021089685	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021089686	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021089687	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021089688	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000022	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK396796	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBZA01000576	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01072032	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000007114 ⟹ ENSSSCP00000006922

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	4	93,865,057 - 93,885,371 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000055162 ⟹ ENSSSCP00000045079

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	4	93,865,058 - 93,886,371 (-)	Ensembl

RefSeq Acc Id:

XM_021089684 ⟹ XP_020945343

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	4	93,865,054 - 93,886,397 (-)	NCBI

Sequence:

show sequence

TCTGGAAATTCTGGTTTCCCTTGCCCAGAGCTCCCAGTGCTGGCTTTGCCACTATGGATACCTG
GAGGGCCACACTCCTGGCCCAGCCAGGCTGAGCCTTCTGTCCTCTGCCTCTGGGGCCTGGGACC
AACTCCCCCTTCTCCTTCCTCTTGGATGGCACCCCCACCCGAGAGTCTGGACACCTGGGTTCTG
CACTGTGGCTGGCTCAAGGAGCCATCTGGTGACAGCCTCTGGCTGAGCATGGCCCTTTCAGCCC
TGGGCCTGGACTCCTGGAGCCTCCTGGGCCTTTTCCTCTTCCAGCTGCTCCTGCTGCTGTTGCC
GCCGACAACCACGGGGGGTGACAGGCAGGGGCCCACACCCAGGGTCCAGTACCATGCAGGGGAC
GGACGCAGAGTTCTTAGCCTCTTCCACCAGAAGGGCCTCCAGGATTTTGACACTCTGCTCTTGA
GTGGTGACGGAGGCACTCTCTATGTGGGGGCTCGTGAGGCCATTCTGGCCTTGAATATCCAGGA
TCCAGGGGTACCAAGGCTGAAGAACATGATCCCCTGGCCAGCCAGTGACAGAAAAAAGAGTGAA
TGTGCCTTTAAGAAGAAGAGCAATGAGACACAGTGTTTCAACTTTATCCGCGTCCTGGTCTCCT
TCAACGCCACCCATCTCTACGCCTGCGGCACCTTTGCTTTCAGCCCTGCTTGTACCTTCATTGA
ACTCCAAGATTCCTACCTGTTGCCCATCTTGGAGGACAAGGTCGTGGAGGGGAAAGGCCAAAGC
CCCTTTGACCCCGCCCATAAGCACACGGCTGTCTTGGCAGATGGGATGCTCTATTCCGGCACCA
TGAACAACTTTCTGGGCAGTGAGCCCATCCTGATGCGCACACTGGGATCCCAGCCTGTCCTCAA
GACCGACAATTTCCTCCGCTGGCTGCAATCGGACGCCTCCTTTGTGGCAGCCATTCCTTCGACC
CAGGTCGTCTACTTCTTCTTCGAGGAGACAGCCAGCGAGTTCGAGTTCTTCGAGAAGCTCCACA
CATCCCGGGTGGCCAGAGTCTGCAAGAACGACGTGGGGGGAGAAAAGCTACTGCAGAAAAAGTG
GACTACCTTCCTGAAGGCCCAGCTGCTCTGCGCCCAGCCCGGACAGCTGCCCTTCAACGTCATC
CGCCACGCCGTTCTGCTGGCAGACAATTACTCCACTGATCCCCATGTCTACGCAGTCTTCACCT
CTCAGTGGCGGGTCGGTGGGACCCGGAGCTCTGCTGTCTGTGCTTTTTCTCTCAAGGACATCAA
GCGTGTCTTTGAGGGAAAGTACAAGGAATTGAACAAAGAGACTTCACGCTGGACTACCTACGGG
TTCCCTGATATTAGTCCCCGGCCAGGCAGCTGCTCAGAGGGCCCCTCCTCTGATAAAGCCTTGA
CCTTCATGAAGGACCATTTCCTGATGGATGAGCCGGTGATTGGGACACCCCTGCTGGTGAAGTC
TGGTGTGGAGTACACACAGCTTGCAGTGGAGACAGCCCAGGGCATCGATGGGCGCAGCCATCTG
GTCATGTACCTGGGCACCAGCACAGGGTCCCTCCACAAGGCCGTGGTGAGTGGGGGTAGCAGTG
CTTATCTGGTGGAGGAGATCCAGCTGTTCCCGGACCCTGAACCTGTTCGCAACCTGCAGCTGGC
CCCTACCCAGGGCGCCGTGTTTGCGGGCTTCTCAGGAGGCATCTGGAGGGTTCCCCGAGCCAAC
TGCAGTGTCTATGAGAGCTGTGTGGATTGTGTCCTTGCCCGGGACCCCCACTGTGCCTGGGACC
CCCAGTCCCAAAACTGCCGCCTCCTGCCCACCCCTATCCCGAAGTTCTGGAAGCAGGACATGGA
GCAAGGGAACCCAGAGTGGGCGTGTGCCAATGGCCCCAGGGGCAGGAGCCTCGGGCCTCAGATC
CGCCCCCAAATCATCAAAGAAGTCCTGGCCATCCCCAACTCCATCCTGGAGCTCCCCTGCCCCC
GTCTCTCAGCTCTGGCCTCTTACCACTGGAGTCATGGCACAACGACAATCCCGGACACCTCTTC
CATGGTCTACCGCGGCTCCCTCTTGCTGCTGCTGCGAGATGGTGTGGGGGGTCTCTATCAGTGC
TGGGCCACCGAGAATGACTTCTCATACCCTGTGGTCTCCTACTGGGTGGACAGTCAGGACCAGC
CCCTGGCCCTGGATCCCAAACTGGCGGGCATCCCCCGGGAGCGCGTGGAAGCCCCGCTGACCAG
GGTCGGCGGTGGGGCCGCCCCAGCTGCCCAGCGGTCCTACTGGCCCCACTTCATCACCGTCACT
GTGCTTCTAGCCTTAGTGTTTTCAGGAGCCCTCATCATCCTCCTCGCCTCCCCGCTGGGGGCCC
TCCGAGCCCGGGGAAAGGTCCAAGGCTGTGGGACCCTGCCCCCCGGGGAGAAGGCCCCCTTGAG
CCAGGAGCAGTACCTCCCACCCACCAAGGAATGCAGGACCTCTGCCTGTGATGTGGATGCCGCC
GACCACAACTTGCAGGGCACTGAGGTGGCTTAAACTCTGGGTACGGGCTGGGGCTGTTGGACAG
GGCAGGGTTCTTGGCCATGCTGGCTGGGGGGGACCTGGAGCAGCAGTGCAGCCCTGACTAGGAT
GGGAGTAGCACAAGAGACCACCCTCTTCCTGCAAGAGGAGCTTCTCCTCCCACTCTGTGCCGCT
GATTGCACTCAGCGGGGCTGGGCACAGAGGCCTGACTCCCCTATGGGGCTCCCTTCTACCAAGC
ATGTGGCCTAACGGGGCCACCCCAGACCTGGACCTAGGCTATGATAGGAGGACCTGGCGAGGAG
CCTTCAGTTCTGGCCATTCGGGACACTCCAGAAACATACTTCTGCAGGAGACCTGAAAACATGA
AACATCTAAGCAAGTAAGGTAGCACACGGCACCTGGAGGTTCTGCTCTGAAAGCAGCTGCCACC
CTGGCCACCCACACTCCCCTCTCCCAGGGGTCTTCAGGGCTCTGCAGGGAGCTGCCCCTTCGTG
TTCCTCTTATCAAATCAACTGTGTACCTGGAGGTCCTTCCTGAAGTCTGACCTCCTTCCTTCTC
GCTTCAGTTGGGGCAGATTTGATCCCTTCTGGCCTGGCTAGACCGGCAGGAGTCATCTGAGCCT
TGTTCCCTCCTTTTCCCTGGCTGACTCCTGGTCCCCTCTCCTCTGTTTCAGGATTCAAAAACTG
CTTGTCACAGACAGTTTATTTTTTATTAAAAAGACAAAGCTTAC

hide sequence

RefSeq Acc Id:

XM_021089685 ⟹ XP_020945344

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	4	93,865,054 - 93,890,138 (-)	NCBI

Sequence:

show sequence

GCGGGGGTGTGGCAGGGACGAAGGCACTGGGAGACTGGAAGCCTGGCATTCCAGGCGGAGGGAA
ACGCAGCGGCATCTCCGAGCTCCAGAGCCATCTGGTGACAGCCTCTGGCTGAGCATGGCCCTTT
CAGCCCTGGGCCTGGACTCCTGGAGCCTCCTGGGCCTTTTCCTCTTCCAGCTGCTCCTGCTGCT
GTTGCCGCCGACAACCACGGGGGGTGACAGGCAGGGGCCCACACCCAGGGTCCAGTACCATGCA
GGGGACGGACGCAGAGTTCTTAGCCTCTTCCACCAGAAGGGCCTCCAGGATTTTGACACTCTGC
TCTTGAGTGGTGACGGAGGCACTCTCTATGTGGGGGCTCGTGAGGCCATTCTGGCCTTGAATAT
CCAGGATCCAGGGGTACCAAGGCTGAAGAACATGATCCCCTGGCCAGCCAGTGACAGAAAAAAG
AGTGAATGTGCCTTTAAGAAGAAGAGCAATGAGACACAGTGTTTCAACTTTATCCGCGTCCTGG
TCTCCTTCAACGCCACCCATCTCTACGCCTGCGGCACCTTTGCTTTCAGCCCTGCTTGTACCTT
CATTGAACTCCAAGATTCCTACCTGTTGCCCATCTTGGAGGACAAGGTCGTGGAGGGGAAAGGC
CAAAGCCCCTTTGACCCCGCCCATAAGCACACGGCTGTCTTGGCAGATGGGATGCTCTATTCCG
GCACCATGAACAACTTTCTGGGCAGTGAGCCCATCCTGATGCGCACACTGGGATCCCAGCCTGT
CCTCAAGACCGACAATTTCCTCCGCTGGCTGCAATCGGACGCCTCCTTTGTGGCAGCCATTCCT
TCGACCCAGGTCGTCTACTTCTTCTTCGAGGAGACAGCCAGCGAGTTCGAGTTCTTCGAGAAGC
TCCACACATCCCGGGTGGCCAGAGTCTGCAAGAACGACGTGGGGGGAGAAAAGCTACTGCAGAA
AAAGTGGACTACCTTCCTGAAGGCCCAGCTGCTCTGCGCCCAGCCCGGACAGCTGCCCTTCAAC
GTCATCCGCCACGCCGTTCTGCTGGCAGACAATTACTCCACTGATCCCCATGTCTACGCAGTCT
TCACCTCTCAGTGGCGGGTCGGTGGGACCCGGAGCTCTGCTGTCTGTGCTTTTTCTCTCAAGGA
CATCAAGCGTGTCTTTGAGGGAAAGTACAAGGAATTGAACAAAGAGACTTCACGCTGGACTACC
TACGGGTTCCCTGATATTAGTCCCCGGCCAGGCAGCTGCTCAGAGGGCCCCTCCTCTGATAAAG
CCTTGACCTTCATGAAGGACCATTTCCTGATGGATGAGCCGGTGATTGGGACACCCCTGCTGGT
GAAGTCTGGTGTGGAGTACACACAGCTTGCAGTGGAGACAGCCCAGGGCATCGATGGGCGCAGC
CATCTGGTCATGTACCTGGGCACCAGCACAGGGTCCCTCCACAAGGCCGTGGTGAGTGGGGGTA
GCAGTGCTTATCTGGTGGAGGAGATCCAGCTGTTCCCGGACCCTGAACCTGTTCGCAACCTGCA
GCTGGCCCCTACCCAGGGCGCCGTGTTTGCGGGCTTCTCAGGAGGCATCTGGAGGGTTCCCCGA
GCCAACTGCAGTGTCTATGAGAGCTGTGTGGATTGTGTCCTTGCCCGGGACCCCCACTGTGCCT
GGGACCCCCAGTCCCAAAACTGCCGCCTCCTGCCCACCCCTATCCCGAAGTTCTGGAAGCAGGA
CATGGAGCAAGGGAACCCAGAGTGGGCGTGTGCCAATGGCCCCAGGGGCAGGAGCCTCGGGCCT
CAGATCCGCCCCCAAATCATCAAAGAAGTCCTGGCCATCCCCAACTCCATCCTGGAGCTCCCCT
GCCCCCGTCTCTCAGCTCTGGCCTCTTACCACTGGAGTCATGGCACAACGACAATCCCGGACAC
CTCTTCCATGGTCTACCGCGGCTCCCTCTTGCTGCTGCTGCGAGATGGTGTGGGGGGTCTCTAT
CAGTGCTGGGCCACCGAGAATGACTTCTCATACCCTGTGGTCTCCTACTGGGTGGACAGTCAGG
ACCAGCCCCTGGCCCTGGATCCCAAACTGGCGGGCATCCCCCGGGAGCGCGTGGAAGCCCCGCT
GACCAGGGTCGGCGGTGGGGCCGCCCCAGCTGCCCAGCGGTCCTACTGGCCCCACTTCATCACC
GTCACTGTGCTTCTAGCCTTAGTGTTTTCAGGAGCCCTCATCATCCTCCTCGCCTCCCCGCTGG
GGGCCCTCCGAGCCCGGGGAAAGGTCCAAGGCTGTGGGACCCTGCCCCCCGGGGAGAAGGCCCC
CTTGAGCCAGGAGCAGTACCTCCCACCCACCAAGGAATGCAGGACCTCTGCCTGTGATGTGGAT
GCCGCCGACCACAACTTGCAGGGCACTGAGGTGGCTTAAACTCTGGGTACGGGCTGGGGCTGTT
GGACAGGGCAGGGTTCTTGGCCATGCTGGCTGGGGGGGACCTGGAGCAGCAGTGCAGCCCTGAC
TAGGATGGGAGTAGCACAAGAGACCACCCTCTTCCTGCAAGAGGAGCTTCTCCTCCCACTCTGT
GCCGCTGATTGCACTCAGCGGGGCTGGGCACAGAGGCCTGACTCCCCTATGGGGCTCCCTTCTA
CCAAGCATGTGGCCTAACGGGGCCACCCCAGACCTGGACCTAGGCTATGATAGGAGGACCTGGC
GAGGAGCCTTCAGTTCTGGCCATTCGGGACACTCCAGAAACATACTTCTGCAGGAGACCTGAAA
ACATGAAACATCTAAGCAAGTAAGGTAGCACACGGCACCTGGAGGTTCTGCTCTGAAAGCAGCT
GCCACCCTGGCCACCCACACTCCCCTCTCCCAGGGGTCTTCAGGGCTCTGCAGGGAGCTGCCCC
TTCGTGTTCCTCTTATCAAATCAACTGTGTACCTGGAGGTCCTTCCTGAAGTCTGACCTCCTTC
CTTCTCGCTTCAGTTGGGGCAGATTTGATCCCTTCTGGCCTGGCTAGACCGGCAGGAGTCATCT
GAGCCTTGTTCCCTCCTTTTCCCTGGCTGACTCCTGGTCCCCTCTCCTCTGTTTCAGGATTCAA
AAACTGCTTGTCACAGACAGTTTATTTTTTATTAAAAAGACAAAGCTTAC

hide sequence

RefSeq Acc Id:

XM_021089686 ⟹ XP_020945345

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	4	93,865,054 - 93,892,995 (-)	NCBI

Sequence:

show sequence

CTCCGCCCCTTGCCCGGTACAGACTCTGCTGGAAGCCTTGGACGCCTGGGTTAGGGTCTCCACT
GCTGGGCTGGGGAGCCATCTGGTGACAGCCTCTGGCTGAGCATGGCCCTTTCAGCCCTGGGCCT
GGACTCCTGGAGCCTCCTGGGCCTTTTCCTCTTCCAGCTGCTCCTGCTGCTGTTGCCGCCGACA
ACCACGGGGGGTGACAGGCAGGGGCCCACACCCAGGGTCCAGTACCATGCAGGGGACGGACGCA
GAGTTCTTAGCCTCTTCCACCAGAAGGGCCTCCAGGATTTTGACACTCTGCTCTTGAGTGGTGA
CGGAGGCACTCTCTATGTGGGGGCTCGTGAGGCCATTCTGGCCTTGAATATCCAGGATCCAGGG
GTACCAAGGCTGAAGAACATGATCCCCTGGCCAGCCAGTGACAGAAAAAAGAGTGAATGTGCCT
TTAAGAAGAAGAGCAATGAGACACAGTGTTTCAACTTTATCCGCGTCCTGGTCTCCTTCAACGC
CACCCATCTCTACGCCTGCGGCACCTTTGCTTTCAGCCCTGCTTGTACCTTCATTGAACTCCAA
GATTCCTACCTGTTGCCCATCTTGGAGGACAAGGTCGTGGAGGGGAAAGGCCAAAGCCCCTTTG
ACCCCGCCCATAAGCACACGGCTGTCTTGGCAGATGGGATGCTCTATTCCGGCACCATGAACAA
CTTTCTGGGCAGTGAGCCCATCCTGATGCGCACACTGGGATCCCAGCCTGTCCTCAAGACCGAC
AATTTCCTCCGCTGGCTGCAATCGGACGCCTCCTTTGTGGCAGCCATTCCTTCGACCCAGGTCG
TCTACTTCTTCTTCGAGGAGACAGCCAGCGAGTTCGAGTTCTTCGAGAAGCTCCACACATCCCG
GGTGGCCAGAGTCTGCAAGAACGACGTGGGGGGAGAAAAGCTACTGCAGAAAAAGTGGACTACC
TTCCTGAAGGCCCAGCTGCTCTGCGCCCAGCCCGGACAGCTGCCCTTCAACGTCATCCGCCACG
CCGTTCTGCTGGCAGACAATTACTCCACTGATCCCCATGTCTACGCAGTCTTCACCTCTCAGTG
GCGGGTCGGTGGGACCCGGAGCTCTGCTGTCTGTGCTTTTTCTCTCAAGGACATCAAGCGTGTC
TTTGAGGGAAAGTACAAGGAATTGAACAAAGAGACTTCACGCTGGACTACCTACGGGTTCCCTG
ATATTAGTCCCCGGCCAGGCAGCTGCTCAGAGGGCCCCTCCTCTGATAAAGCCTTGACCTTCAT
GAAGGACCATTTCCTGATGGATGAGCCGGTGATTGGGACACCCCTGCTGGTGAAGTCTGGTGTG
GAGTACACACAGCTTGCAGTGGAGACAGCCCAGGGCATCGATGGGCGCAGCCATCTGGTCATGT
ACCTGGGCACCAGCACAGGGTCCCTCCACAAGGCCGTGGTGAGTGGGGGTAGCAGTGCTTATCT
GGTGGAGGAGATCCAGCTGTTCCCGGACCCTGAACCTGTTCGCAACCTGCAGCTGGCCCCTACC
CAGGGCGCCGTGTTTGCGGGCTTCTCAGGAGGCATCTGGAGGGTTCCCCGAGCCAACTGCAGTG
TCTATGAGAGCTGTGTGGATTGTGTCCTTGCCCGGGACCCCCACTGTGCCTGGGACCCCCAGTC
CCAAAACTGCCGCCTCCTGCCCACCCCTATCCCGAAGTTCTGGAAGCAGGACATGGAGCAAGGG
AACCCAGAGTGGGCGTGTGCCAATGGCCCCAGGGGCAGGAGCCTCGGGCCTCAGATCCGCCCCC
AAATCATCAAAGAAGTCCTGGCCATCCCCAACTCCATCCTGGAGCTCCCCTGCCCCCGTCTCTC
AGCTCTGGCCTCTTACCACTGGAGTCATGGCACAACGACAATCCCGGACACCTCTTCCATGGTC
TACCGCGGCTCCCTCTTGCTGCTGCTGCGAGATGGTGTGGGGGGTCTCTATCAGTGCTGGGCCA
CCGAGAATGACTTCTCATACCCTGTGGTCTCCTACTGGGTGGACAGTCAGGACCAGCCCCTGGC
CCTGGATCCCAAACTGGCGGGCATCCCCCGGGAGCGCGTGGAAGCCCCGCTGACCAGGGTCGGC
GGTGGGGCCGCCCCAGCTGCCCAGCGGTCCTACTGGCCCCACTTCATCACCGTCACTGTGCTTC
TAGCCTTAGTGTTTTCAGGAGCCCTCATCATCCTCCTCGCCTCCCCGCTGGGGGCCCTCCGAGC
CCGGGGAAAGGTCCAAGGCTGTGGGACCCTGCCCCCCGGGGAGAAGGCCCCCTTGAGCCAGGAG
CAGTACCTCCCACCCACCAAGGAATGCAGGACCTCTGCCTGTGATGTGGATGCCGCCGACCACA
ACTTGCAGGGCACTGAGGTGGCTTAAACTCTGGGTACGGGCTGGGGCTGTTGGACAGGGCAGGG
TTCTTGGCCATGCTGGCTGGGGGGGACCTGGAGCAGCAGTGCAGCCCTGACTAGGATGGGAGTA
GCACAAGAGACCACCCTCTTCCTGCAAGAGGAGCTTCTCCTCCCACTCTGTGCCGCTGATTGCA
CTCAGCGGGGCTGGGCACAGAGGCCTGACTCCCCTATGGGGCTCCCTTCTACCAAGCATGTGGC
CTAACGGGGCCACCCCAGACCTGGACCTAGGCTATGATAGGAGGACCTGGCGAGGAGCCTTCAG
TTCTGGCCATTCGGGACACTCCAGAAACATACTTCTGCAGGAGACCTGAAAACATGAAACATCT
AAGCAAGTAAGGTAGCACACGGCACCTGGAGGTTCTGCTCTGAAAGCAGCTGCCACCCTGGCCA
CCCACACTCCCCTCTCCCAGGGGTCTTCAGGGCTCTGCAGGGAGCTGCCCCTTCGTGTTCCTCT
TATCAAATCAACTGTGTACCTGGAGGTCCTTCCTGAAGTCTGACCTCCTTCCTTCTCGCTTCAG
TTGGGGCAGATTTGATCCCTTCTGGCCTGGCTAGACCGGCAGGAGTCATCTGAGCCTTGTTCCC
TCCTTTTCCCTGGCTGACTCCTGGTCCCCTCTCCTCTGTTTCAGGATTCAAAAACTGCTTGTCA
CAGACAGTTTATTTTTTATTAAAAAGACAAAGCTTAC

hide sequence

RefSeq Acc Id:

XM_021089687 ⟹ XP_020945346

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	4	93,865,054 - 93,889,916 (-)	NCBI

Sequence:

show sequence

CTAGTCAGCCTGGAGGAGGAAACCTAGGAGACACTGGAGCCATCTGGTGACAGCCTCTGGCTGA
GCATGGCCCTTTCAGCCCTGGGCCTGGACTCCTGGAGCCTCCTGGGCCTTTTCCTCTTCCAGCT
GCTCCTGCTGCTGTTGCCGCCGACAACCACGGGGGGTGACAGGCAGGGGCCCACACCCAGGGTC
CAGTACCATGCAGGGGACGGACGCAGAGTTCTTAGCCTCTTCCACCAGAAGGGCCTCCAGGATT
TTGACACTCTGCTCTTGAGTGGTGACGGAGGCACTCTCTATGTGGGGGCTCGTGAGGCCATTCT
GGCCTTGAATATCCAGGATCCAGGGGTACCAAGGCTGAAGAACATGATCCCCTGGCCAGCCAGT
GACAGAAAAAAGAGTGAATGTGCCTTTAAGAAGAAGAGCAATGAGACACAGTGTTTCAACTTTA
TCCGCGTCCTGGTCTCCTTCAACGCCACCCATCTCTACGCCTGCGGCACCTTTGCTTTCAGCCC
TGCTTGTACCTTCATTGAACTCCAAGATTCCTACCTGTTGCCCATCTTGGAGGACAAGGTCGTG
GAGGGGAAAGGCCAAAGCCCCTTTGACCCCGCCCATAAGCACACGGCTGTCTTGGCAGATGGGA
TGCTCTATTCCGGCACCATGAACAACTTTCTGGGCAGTGAGCCCATCCTGATGCGCACACTGGG
ATCCCAGCCTGTCCTCAAGACCGACAATTTCCTCCGCTGGCTGCAATCGGACGCCTCCTTTGTG
GCAGCCATTCCTTCGACCCAGGTCGTCTACTTCTTCTTCGAGGAGACAGCCAGCGAGTTCGAGT
TCTTCGAGAAGCTCCACACATCCCGGGTGGCCAGAGTCTGCAAGAACGACGTGGGGGGAGAAAA
GCTACTGCAGAAAAAGTGGACTACCTTCCTGAAGGCCCAGCTGCTCTGCGCCCAGCCCGGACAG
CTGCCCTTCAACGTCATCCGCCACGCCGTTCTGCTGGCAGACAATTACTCCACTGATCCCCATG
TCTACGCAGTCTTCACCTCTCAGTGGCGGGTCGGTGGGACCCGGAGCTCTGCTGTCTGTGCTTT
TTCTCTCAAGGACATCAAGCGTGTCTTTGAGGGAAAGTACAAGGAATTGAACAAAGAGACTTCA
CGCTGGACTACCTACGGGTTCCCTGATATTAGTCCCCGGCCAGGCAGCTGCTCAGAGGGCCCCT
CCTCTGATAAAGCCTTGACCTTCATGAAGGACCATTTCCTGATGGATGAGCCGGTGATTGGGAC
ACCCCTGCTGGTGAAGTCTGGTGTGGAGTACACACAGCTTGCAGTGGAGACAGCCCAGGGCATC
GATGGGCGCAGCCATCTGGTCATGTACCTGGGCACCAGCACAGGGTCCCTCCACAAGGCCGTGG
TGAGTGGGGGTAGCAGTGCTTATCTGGTGGAGGAGATCCAGCTGTTCCCGGACCCTGAACCTGT
TCGCAACCTGCAGCTGGCCCCTACCCAGGGCGCCGTGTTTGCGGGCTTCTCAGGAGGCATCTGG
AGGGTTCCCCGAGCCAACTGCAGTGTCTATGAGAGCTGTGTGGATTGTGTCCTTGCCCGGGACC
CCCACTGTGCCTGGGACCCCCAGTCCCAAAACTGCCGCCTCCTGCCCACCCCTATCCCGAAGTT
CTGGAAGCAGGACATGGAGCAAGGGAACCCAGAGTGGGCGTGTGCCAATGGCCCCAGGGGCAGG
AGCCTCGGGCCTCAGATCCGCCCCCAAATCATCAAAGAAGTCCTGGCCATCCCCAACTCCATCC
TGGAGCTCCCCTGCCCCCGTCTCTCAGCTCTGGCCTCTTACCACTGGAGTCATGGCACAACGAC
AATCCCGGACACCTCTTCCATGGTCTACCGCGGCTCCCTCTTGCTGCTGCTGCGAGATGGTGTG
GGGGGTCTCTATCAGTGCTGGGCCACCGAGAATGACTTCTCATACCCTGTGGTCTCCTACTGGG
TGGACAGTCAGGACCAGCCCCTGGCCCTGGATCCCAAACTGGCGGGCATCCCCCGGGAGCGCGT
GGAAGCCCCGCTGACCAGGGTCGGCGGTGGGGCCGCCCCAGCTGCCCAGCGGTCCTACTGGCCC
CACTTCATCACCGTCACTGTGCTTCTAGCCTTAGTGTTTTCAGGAGCCCTCATCATCCTCCTCG
CCTCCCCGCTGGGGGCCCTCCGAGCCCGGGGAAAGGTCCAAGGCTGTGGGACCCTGCCCCCCGG
GGAGAAGGCCCCCTTGAGCCAGGAGCAGTACCTCCCACCCACCAAGGAATGCAGGACCTCTGCC
TGTGATGTGGATGCCGCCGACCACAACTTGCAGGGCACTGAGGTGGCTTAAACTCTGGGTACGG
GCTGGGGCTGTTGGACAGGGCAGGGTTCTTGGCCATGCTGGCTGGGGGGGACCTGGAGCAGCAG
TGCAGCCCTGACTAGGATGGGAGTAGCACAAGAGACCACCCTCTTCCTGCAAGAGGAGCTTCTC
CTCCCACTCTGTGCCGCTGATTGCACTCAGCGGGGCTGGGCACAGAGGCCTGACTCCCCTATGG
GGCTCCCTTCTACCAAGCATGTGGCCTAACGGGGCCACCCCAGACCTGGACCTAGGCTATGATA
GGAGGACCTGGCGAGGAGCCTTCAGTTCTGGCCATTCGGGACACTCCAGAAACATACTTCTGCA
GGAGACCTGAAAACATGAAACATCTAAGCAAGTAAGGTAGCACACGGCACCTGGAGGTTCTGCT
CTGAAAGCAGCTGCCACCCTGGCCACCCACACTCCCCTCTCCCAGGGGTCTTCAGGGCTCTGCA
GGGAGCTGCCCCTTCGTGTTCCTCTTATCAAATCAACTGTGTACCTGGAGGTCCTTCCTGAAGT
CTGACCTCCTTCCTTCTCGCTTCAGTTGGGGCAGATTTGATCCCTTCTGGCCTGGCTAGACCGG
CAGGAGTCATCTGAGCCTTGTTCCCTCCTTTTCCCTGGCTGACTCCTGGTCCCCTCTCCTCTGT
TTCAGGATTCAAAAACTGCTTGTCACAGACAGTTTATTTTTTATTAAAAAGACAAAGCTTAC

hide sequence

RefSeq Acc Id:

XM_021089688 ⟹ XP_020945347

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	4	93,865,054 - 93,890,286 (-)	NCBI

Sequence:

show sequence

GTGGATCCAGGAGCCGCAGAAGAGCCATCTGGTGACAGCCTCTGGCTGAGCATGGCCCTTTCAG
CCCTGGGCCTGGACTCCTGGAGCCTCCTGGGCCTTTTCCTCTTCCAGCTGCTCCTGCTGCTGTT
GCCGCCGACAACCACGGGGGGTGACAGGCAGGGGCCCACACCCAGGGTCCAGTACCATGCAGGG
GACGGACGCAGAGTTCTTAGCCTCTTCCACCAGAAGGGCCTCCAGGATTTTGACACTCTGCTCT
TGAGTGGTGACGGAGGCACTCTCTATGTGGGGGCTCGTGAGGCCATTCTGGCCTTGAATATCCA
GGATCCAGGGGTACCAAGGCTGAAGAACATGATCCCCTGGCCAGCCAGTGACAGAAAAAAGAGT
GAATGTGCCTTTAAGAAGAAGAGCAATGAGACACAGTGTTTCAACTTTATCCGCGTCCTGGTCT
CCTTCAACGCCACCCATCTCTACGCCTGCGGCACCTTTGCTTTCAGCCCTGCTTGTACCTTCAT
TGAACTCCAAGATTCCTACCTGTTGCCCATCTTGGAGGACAAGGTCGTGGAGGGGAAAGGCCAA
AGCCCCTTTGACCCCGCCCATAAGCACACGGCTGTCTTGGCAGATGGGATGCTCTATTCCGGCA
CCATGAACAACTTTCTGGGCAGTGAGCCCATCCTGATGCGCACACTGGGATCCCAGCCTGTCCT
CAAGACCGACAATTTCCTCCGCTGGCTGCAATCGGACGCCTCCTTTGTGGCAGCCATTCCTTCG
ACCCAGGTCGTCTACTTCTTCTTCGAGGAGACAGCCAGCGAGTTCGAGTTCTTCGAGAAGCTCC
ACACATCCCGGGTGGCCAGAGTCTGCAAGAACGACGTGGGGGGAGAAAAGCTACTGCAGAAAAA
GTGGACTACCTTCCTGAAGGCCCAGCTGCTCTGCGCCCAGCCCGGACAGCTGCCCTTCAACGTC
ATCCGCCACGCCGTTCTGCTGGCAGACAATTACTCCACTGATCCCCATGTCTACGCAGTCTTCA
CCTCTCAGTGGCGGGTCGGTGGGACCCGGAGCTCTGCTGTCTGTGCTTTTTCTCTCAAGGACAT
CAAGCGTGTCTTTGAGGGAAAGTACAAGGAATTGAACAAAGAGACTTCACGCTGGACTACCTAC
GGGTTCCCTGATATTAGTCCCCGGCCAGGCAGCTGCTCAGAGGGCCCCTCCTCTGATAAAGCCT
TGACCTTCATGAAGGACCATTTCCTGATGGATGAGCCGGTGATTGGGACACCCCTGCTGGTGAA
GTCTGGTGTGGAGTACACACAGCTTGCAGTGGAGACAGCCCAGGGCATCGATGGGCGCAGCCAT
CTGGTCATGTACCTGGGCACCAGCACAGGGTCCCTCCACAAGGCCGTGGTGAGTGGGGGTAGCA
GTGCTTATCTGGTGGAGGAGATCCAGCTGTTCCCGGACCCTGAACCTGTTCGCAACCTGCAGCT
GGCCCCTACCCAGGGCGCCGTGTTTGCGGGCTTCTCAGGAGGCATCTGGAGGGTTCCCCGAGCC
AACTGCAGTGTCTATGAGAGCTGTGTGGATTGTGTCCTTGCCCGGGACCCCCACTGTGCCTGGG
ACCCCCAGTCCCAAAACTGCCGCCTCCTGCCCACCCCTATCCCGAAGTTCTGGAAGCAGGACAT
GGAGCAAGGGAACCCAGAGTGGGCGTGTGCCAATGGCCCCAGGGGCAGGAGCCTCGGGCCTCAG
ATCCGCCCCCAAATCATCAAAGAAGTCCTGGCCATCCCCAACTCCATCCTGGAGCTCCCCTGCC
CCCGTCTCTCAGCTCTGGCCTCTTACCACTGGAGTCATGGCACAACGACAATCCCGGACACCTC
TTCCATGGTCTACCGCGGCTCCCTCTTGCTGCTGCTGCGAGATGGTGTGGGGGGTCTCTATCAG
TGCTGGGCCACCGAGAATGACTTCTCATACCCTGTGGTCTCCTACTGGGTGGACAGTCAGGACC
AGCCCCTGGCCCTGGATCCCAAACTGGCGGGCATCCCCCGGGAGCGCGTGGAAGCCCCGCTGAC
CAGGGTCGGCGGTGGGGCCGCCCCAGCTGCCCAGCGGTCCTACTGGCCCCACTTCATCACCGTC
ACTGTGCTTCTAGCCTTAGTGTTTTCAGGAGCCCTCATCATCCTCCTCGCCTCCCCGCTGGGGG
CCCTCCGAGCCCGGGGAAAGGTCCAAGGCTGTGGGACCCTGCCCCCCGGGGAGAAGGCCCCCTT
GAGCCAGGAGCAGTACCTCCCACCCACCAAGGAATGCAGGACCTCTGCCTGTGATGTGGATGCC
GCCGACCACAACTTGCAGGGCACTGAGGTGGCTTAAACTCTGGGTACGGGCTGGGGCTGTTGGA
CAGGGCAGGGTTCTTGGCCATGCTGGCTGGGGGGGACCTGGAGCAGCAGTGCAGCCCTGACTAG
GATGGGAGTAGCACAAGAGACCACCCTCTTCCTGCAAGAGGAGCTTCTCCTCCCACTCTGTGCC
GCTGATTGCACTCAGCGGGGCTGGGCACAGAGGCCTGACTCCCCTATGGGGCTCCCTTCTACCA
AGCATGTGGCCTAACGGGGCCACCCCAGACCTGGACCTAGGCTATGATAGGAGGACCTGGCGAG
GAGCCTTCAGTTCTGGCCATTCGGGACACTCCAGAAACATACTTCTGCAGGAGACCTGAAAACA
TGAAACATCTAAGCAAGTAAGGTAGCACACGGCACCTGGAGGTTCTGCTCTGAAAGCAGCTGCC
ACCCTGGCCACCCACACTCCCCTCTCCCAGGGGTCTTCAGGGCTCTGCAGGGAGCTGCCCCTTC
GTGTTCCTCTTATCAAATCAACTGTGTACCTGGAGGTCCTTCCTGAAGTCTGACCTCCTTCCTT
CTCGCTTCAGTTGGGGCAGATTTGATCCCTTCTGGCCTGGCTAGACCGGCAGGAGTCATCTGAG
CCTTGTTCCCTCCTTTTCCCTGGCTGACTCCTGGTCCCCTCTCCTCTGTTTCAGGATTCAAAAA
CTGCTTGTCACAGACAGTTTATTTTTTATTAAAAAGACAAAGCTTAC

hide sequence

Protein Sequences


Protein RefSeqs	XP_020945343	(Get FASTA)	NCBI Sequence Viewer
	XP_020945344	(Get FASTA)	NCBI Sequence Viewer
	XP_020945345	(Get FASTA)	NCBI Sequence Viewer
	XP_020945346	(Get FASTA)	NCBI Sequence Viewer
	XP_020945347	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000006922
	ENSSSCP00000006922.4
	ENSSSCP00000045079
	ENSSSCP00000045079.1
	ENSSSCP00005011475.1
	ENSSSCP00005011488.1
	ENSSSCP00005011503.1
	ENSSSCP00005011555.1
	ENSSSCP00005011574.1
	ENSSSCP00015032277.1
	ENSSSCP00015032348.1
	ENSSSCP00025001458.1
	ENSSSCP00025001479.1
	ENSSSCP00030008730.1
	ENSSSCP00030008736.1
	ENSSSCP00035018441.1
	ENSSSCP00035018443.1
	ENSSSCP00040032140.1
	ENSSSCP00040032199.1
	ENSSSCP00040032273.1
	ENSSSCP00045033992.1
	ENSSSCP00045034087.1
	ENSSSCP00055035990.1
	ENSSSCP00055036110.1
	ENSSSCP00060046997.1
	ENSSSCP00060047019.1
GenBank Protein	JAG69192	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_020945345 ⟸ XM_021089686
- Peptide Label:	isoform X2
- UniProtKB:	A0A8D1F5K7 (UniProtKB/TrEMBL), A0A8D0IJH7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MALSALGLDSWSLLGLFLFQLLLLLLPPTTTGGDRQGPTPRVQYHAGDGRRVLSLFHQKGLQDF DTLLLSGDGGTLYVGAREAILALNIQDPGVPRLKNMIPWPASDRKKSECAFKKKSNETQCFNFI RVLVSFNATHLYACGTFAFSPACTFIELQDSYLLPILEDKVVEGKGQSPFDPAHKHTAVLADGM LYSGTMNNFLGSEPILMRTLGSQPVLKTDNFLRWLQSDASFVAAIPSTQVVYFFFEETASEFEF FEKLHTSRVARVCKNDVGGEKLLQKKWTTFLKAQLLCAQPGQLPFNVIRHAVLLADNYSTDPHV YAVFTSQWRVGGTRSSAVCAFSLKDIKRVFEGKYKELNKETSRWTTYGFPDISPRPGSCSEGPS SDKALTFMKDHFLMDEPVIGTPLLVKSGVEYTQLAVETAQGIDGRSHLVMYLGTSTGSLHKAVV SGGSSAYLVEEIQLFPDPEPVRNLQLAPTQGAVFAGFSGGIWRVPRANCSVYESCVDCVLARDP HCAWDPQSQNCRLLPTPIPKFWKQDMEQGNPEWACANGPRGRSLGPQIRPQIIKEVLAIPNSIL ELPCPRLSALASYHWSHGTTTIPDTSSMVYRGSLLLLLRDGVGGLYQCWATENDFSYPVVSYWV DSQDQPLALDPKLAGIPRERVEAPLTRVGGGAAPAAQRSYWPHFITVTVLLALVFSGALIILLA SPLGALRARGKVQGCGTLPPGEKAPLSQEQYLPPTKECRTSACDVDAADHNLQGTEVA hide sequence

RefSeq Acc Id:	XP_020945347 ⟸ XM_021089688
- Peptide Label:	isoform X2
- UniProtKB:	A0A8D1F5K7 (UniProtKB/TrEMBL), A0A8D0IJH7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MALSALGLDSWSLLGLFLFQLLLLLLPPTTTGGDRQGPTPRVQYHAGDGRRVLSLFHQKGLQDF DTLLLSGDGGTLYVGAREAILALNIQDPGVPRLKNMIPWPASDRKKSECAFKKKSNETQCFNFI RVLVSFNATHLYACGTFAFSPACTFIELQDSYLLPILEDKVVEGKGQSPFDPAHKHTAVLADGM LYSGTMNNFLGSEPILMRTLGSQPVLKTDNFLRWLQSDASFVAAIPSTQVVYFFFEETASEFEF FEKLHTSRVARVCKNDVGGEKLLQKKWTTFLKAQLLCAQPGQLPFNVIRHAVLLADNYSTDPHV YAVFTSQWRVGGTRSSAVCAFSLKDIKRVFEGKYKELNKETSRWTTYGFPDISPRPGSCSEGPS SDKALTFMKDHFLMDEPVIGTPLLVKSGVEYTQLAVETAQGIDGRSHLVMYLGTSTGSLHKAVV SGGSSAYLVEEIQLFPDPEPVRNLQLAPTQGAVFAGFSGGIWRVPRANCSVYESCVDCVLARDP HCAWDPQSQNCRLLPTPIPKFWKQDMEQGNPEWACANGPRGRSLGPQIRPQIIKEVLAIPNSIL ELPCPRLSALASYHWSHGTTTIPDTSSMVYRGSLLLLLRDGVGGLYQCWATENDFSYPVVSYWV DSQDQPLALDPKLAGIPRERVEAPLTRVGGGAAPAAQRSYWPHFITVTVLLALVFSGALIILLA SPLGALRARGKVQGCGTLPPGEKAPLSQEQYLPPTKECRTSACDVDAADHNLQGTEVA hide sequence

RefSeq Acc Id:	XP_020945344 ⟸ XM_021089685
- Peptide Label:	isoform X2
- UniProtKB:	A0A8D1F5K7 (UniProtKB/TrEMBL), A0A8D0IJH7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MALSALGLDSWSLLGLFLFQLLLLLLPPTTTGGDRQGPTPRVQYHAGDGRRVLSLFHQKGLQDF DTLLLSGDGGTLYVGAREAILALNIQDPGVPRLKNMIPWPASDRKKSECAFKKKSNETQCFNFI RVLVSFNATHLYACGTFAFSPACTFIELQDSYLLPILEDKVVEGKGQSPFDPAHKHTAVLADGM LYSGTMNNFLGSEPILMRTLGSQPVLKTDNFLRWLQSDASFVAAIPSTQVVYFFFEETASEFEF FEKLHTSRVARVCKNDVGGEKLLQKKWTTFLKAQLLCAQPGQLPFNVIRHAVLLADNYSTDPHV YAVFTSQWRVGGTRSSAVCAFSLKDIKRVFEGKYKELNKETSRWTTYGFPDISPRPGSCSEGPS SDKALTFMKDHFLMDEPVIGTPLLVKSGVEYTQLAVETAQGIDGRSHLVMYLGTSTGSLHKAVV SGGSSAYLVEEIQLFPDPEPVRNLQLAPTQGAVFAGFSGGIWRVPRANCSVYESCVDCVLARDP HCAWDPQSQNCRLLPTPIPKFWKQDMEQGNPEWACANGPRGRSLGPQIRPQIIKEVLAIPNSIL ELPCPRLSALASYHWSHGTTTIPDTSSMVYRGSLLLLLRDGVGGLYQCWATENDFSYPVVSYWV DSQDQPLALDPKLAGIPRERVEAPLTRVGGGAAPAAQRSYWPHFITVTVLLALVFSGALIILLA SPLGALRARGKVQGCGTLPPGEKAPLSQEQYLPPTKECRTSACDVDAADHNLQGTEVA hide sequence

RefSeq Acc Id:	XP_020945346 ⟸ XM_021089687
- Peptide Label:	isoform X2
- UniProtKB:	A0A8D1F5K7 (UniProtKB/TrEMBL), A0A8D0IJH7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MALSALGLDSWSLLGLFLFQLLLLLLPPTTTGGDRQGPTPRVQYHAGDGRRVLSLFHQKGLQDF DTLLLSGDGGTLYVGAREAILALNIQDPGVPRLKNMIPWPASDRKKSECAFKKKSNETQCFNFI RVLVSFNATHLYACGTFAFSPACTFIELQDSYLLPILEDKVVEGKGQSPFDPAHKHTAVLADGM LYSGTMNNFLGSEPILMRTLGSQPVLKTDNFLRWLQSDASFVAAIPSTQVVYFFFEETASEFEF FEKLHTSRVARVCKNDVGGEKLLQKKWTTFLKAQLLCAQPGQLPFNVIRHAVLLADNYSTDPHV YAVFTSQWRVGGTRSSAVCAFSLKDIKRVFEGKYKELNKETSRWTTYGFPDISPRPGSCSEGPS SDKALTFMKDHFLMDEPVIGTPLLVKSGVEYTQLAVETAQGIDGRSHLVMYLGTSTGSLHKAVV SGGSSAYLVEEIQLFPDPEPVRNLQLAPTQGAVFAGFSGGIWRVPRANCSVYESCVDCVLARDP HCAWDPQSQNCRLLPTPIPKFWKQDMEQGNPEWACANGPRGRSLGPQIRPQIIKEVLAIPNSIL ELPCPRLSALASYHWSHGTTTIPDTSSMVYRGSLLLLLRDGVGGLYQCWATENDFSYPVVSYWV DSQDQPLALDPKLAGIPRERVEAPLTRVGGGAAPAAQRSYWPHFITVTVLLALVFSGALIILLA SPLGALRARGKVQGCGTLPPGEKAPLSQEQYLPPTKECRTSACDVDAADHNLQGTEVA hide sequence

RefSeq Acc Id:	XP_020945343 ⟸ XM_021089684
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D1F5R3 (UniProtKB/TrEMBL), A0A287AME3 (UniProtKB/TrEMBL), A0A8D0PE78 (UniProtKB/TrEMBL), A0A8D1RHT8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAPPPESLDTWVLHCGWLKEPSGDSLWLSMALSALGLDSWSLLGLFLFQLLLLLLPPTTTGGDR QGPTPRVQYHAGDGRRVLSLFHQKGLQDFDTLLLSGDGGTLYVGAREAILALNIQDPGVPRLKN MIPWPASDRKKSECAFKKKSNETQCFNFIRVLVSFNATHLYACGTFAFSPACTFIELQDSYLLP ILEDKVVEGKGQSPFDPAHKHTAVLADGMLYSGTMNNFLGSEPILMRTLGSQPVLKTDNFLRWL QSDASFVAAIPSTQVVYFFFEETASEFEFFEKLHTSRVARVCKNDVGGEKLLQKKWTTFLKAQL LCAQPGQLPFNVIRHAVLLADNYSTDPHVYAVFTSQWRVGGTRSSAVCAFSLKDIKRVFEGKYK ELNKETSRWTTYGFPDISPRPGSCSEGPSSDKALTFMKDHFLMDEPVIGTPLLVKSGVEYTQLA VETAQGIDGRSHLVMYLGTSTGSLHKAVVSGGSSAYLVEEIQLFPDPEPVRNLQLAPTQGAVFA GFSGGIWRVPRANCSVYESCVDCVLARDPHCAWDPQSQNCRLLPTPIPKFWKQDMEQGNPEWAC ANGPRGRSLGPQIRPQIIKEVLAIPNSILELPCPRLSALASYHWSHGTTTIPDTSSMVYRGSLL LLLRDGVGGLYQCWATENDFSYPVVSYWVDSQDQPLALDPKLAGIPRERVEAPLTRVGGGAAPA AQRSYWPHFITVTVLLALVFSGALIILLASPLGALRARGKVQGCGTLPPGEKAPLSQEQYLPPT KECRTSACDVDAADHNLQGTEVA hide sequence

RefSeq Acc Id:

ENSSSCP00000045079 ⟸ ENSSSCT00000055162

RefSeq Acc Id:

ENSSSCP00000006922 ⟸ ENSSSCT00000007114

Protein Domains

Sema

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000006495	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00005012265	UniProtKB/TrEMBL
	ENSSSCG00015059838	UniProtKB/TrEMBL
	ENSSSCG00025002886	UniProtKB/TrEMBL
	ENSSSCG00030014270	UniProtKB/TrEMBL
	ENSSSCG00035034818	UniProtKB/TrEMBL
	ENSSSCG00040055262	UniProtKB/TrEMBL
	ENSSSCG00045028634	UniProtKB/TrEMBL
	ENSSSCG00055022969	UniProtKB/TrEMBL
	ENSSSCG00060077350	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000007114	ENTREZGENE
	ENSSSCT00000007114.5	UniProtKB/TrEMBL
	ENSSSCT00000055162	ENTREZGENE
	ENSSSCT00000055162.2	UniProtKB/TrEMBL
	ENSSSCT00005019066.1	UniProtKB/TrEMBL
	ENSSSCT00005019082.1	UniProtKB/TrEMBL
	ENSSSCT00005019101.1	UniProtKB/TrEMBL
	ENSSSCT00005019182.1	UniProtKB/TrEMBL
	ENSSSCT00005019205.1	UniProtKB/TrEMBL
	ENSSSCT00015079903.1	UniProtKB/TrEMBL
	ENSSSCT00015080037.1	UniProtKB/TrEMBL
	ENSSSCT00025003812.1	UniProtKB/TrEMBL
	ENSSSCT00025003847.1	UniProtKB/TrEMBL
	ENSSSCT00030019632.1	UniProtKB/TrEMBL
	ENSSSCT00030019641.1	UniProtKB/TrEMBL
	ENSSSCT00035046131.1	UniProtKB/TrEMBL
	ENSSSCT00035046134.1	UniProtKB/TrEMBL
	ENSSSCT00040074907.1	UniProtKB/TrEMBL
	ENSSSCT00040075043.1	UniProtKB/TrEMBL
	ENSSSCT00040075210.1	UniProtKB/TrEMBL
	ENSSSCT00045048875.1	UniProtKB/TrEMBL
	ENSSSCT00045048997.1	UniProtKB/TrEMBL
	ENSSSCT00055045167.1	UniProtKB/TrEMBL
	ENSSSCT00055045310.1	UniProtKB/TrEMBL
	ENSSSCT00060106447.1	UniProtKB/TrEMBL
	ENSSSCT00060106472.1	UniProtKB/TrEMBL
Gene3D-CATH	2.130.10.10	UniProtKB/TrEMBL
	ligand-binding face of the semaphorins, domain 2	UniProtKB/TrEMBL
InterPro	Plexin_repeat	UniProtKB/TrEMBL
	PSI	UniProtKB/TrEMBL
	Semap_dom	UniProtKB/TrEMBL
	Semap_dom_sf	UniProtKB/TrEMBL
	Semaphorin	UniProtKB/TrEMBL
	WD40/YVTN_repeat-like_dom_sf	UniProtKB/TrEMBL
NCBI Gene	SEMA4A	ENTREZGENE
PANTHER	PTHR11036	UniProtKB/TrEMBL
	SEMAPHORIN-4A	UniProtKB/TrEMBL
Pfam	PSI	UniProtKB/TrEMBL
	Sema	UniProtKB/TrEMBL
PROSITE	SEMA	UniProtKB/TrEMBL
SMART	PSI	UniProtKB/TrEMBL
	Sema	UniProtKB/TrEMBL
Superfamily-SCOP	Plexin repeat	UniProtKB/TrEMBL
	SSF101912	UniProtKB/TrEMBL
UniProt	A0A287AME3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0IG66_PIG	UniProtKB/TrEMBL
	A0A8D0IH10_PIG	UniProtKB/TrEMBL
	A0A8D0IJH7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0PE78	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0PJ42_PIG	UniProtKB/TrEMBL
	A0A8D1F3U5_PIG	UniProtKB/TrEMBL
	A0A8D1F5K7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1F5R3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1IIN2_PIG	UniProtKB/TrEMBL
	A0A8D1RHT8	ENTREZGENE, UniProtKB/TrEMBL
	F1RLQ3_PIG	UniProtKB/TrEMBL
VGNC ID	VGNC:92700	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM