LOC100737900 (olfactory receptor 51G2) - Rat Genome Database

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Gene: LOC100737900 (olfactory receptor 51G2) Sus scrofa
Analyze
Symbol: LOC100737900 (Ensembl: OR51G2)
Name: olfactory receptor 51G2 (Ensembl:olfactory receptor family 51 subfamily G member 2)
RGD ID: 14158935
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of smell (inferred); ASSOCIATED WITH delta beta-thalassemia (ortholog); genetic disease (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl95,217,183 - 5,223,159 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.195,216,154 - 5,223,998 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.295,852,042 - 5,852,983 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)
plasma membrane  (IBA,IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
LOC100737900
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl95,217,183 - 5,223,159 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.195,216,154 - 5,223,998 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.295,852,042 - 5,852,983 (+)NCBISscrofa10.2Sscrofa10.2susScr3
OR51G2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38114,912,588 - 4,919,350 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl114,912,588 - 4,919,350 (-)EnsemblGRCh38hg38GRCh38
GRCh37114,933,818 - 4,940,580 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36114,892,525 - 4,893,469 (-)NCBINCBI36Build 36hg18NCBI36
Build 34114,892,524 - 4,893,469NCBI
Celera115,059,757 - 5,060,701 (-)NCBICelera
Cytogenetic Map11p15.4NCBI
HuRef114,594,576 - 4,595,520 (-)NCBIHuRef
CHM1_1114,935,536 - 4,936,480 (-)NCBICHM1_1
T2T-CHM13v2.0114,978,116 - 4,984,880 (-)NCBIT2T-CHM13v2.0
Or51g2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397102,622,259 - 102,623,197 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7102,620,387 - 102,625,150 (-)EnsemblGRCm39 Ensembl
GRCm387102,973,052 - 102,973,990 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7102,971,180 - 102,975,943 (-)EnsemblGRCm38mm10GRCm38
MGSCv377110,121,566 - 110,122,504 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367102,846,873 - 102,847,811 (-)NCBIMGSCv36mm8
Celera7103,330,688 - 103,331,626 (-)NCBICelera
Cytogenetic Map7E3NCBI
cM Map754.85NCBI
Or51g2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81166,833,547 - 166,834,485 (-)NCBIGRCr8
mRatBN7.21157,421,637 - 157,422,575 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1157,421,637 - 157,422,575 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1165,389,119 - 165,390,057 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01172,569,220 - 172,570,158 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01165,478,975 - 165,479,913 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01168,143,384 - 168,144,322 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1168,142,529 - 168,144,280 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01174,317,933 - 174,318,871 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41160,772,197 - 160,773,135 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11160,851,213 - 160,852,152 (-)NCBI
Celera1155,468,236 - 155,469,174 (-)NCBICelera
Cytogenetic Map1q32NCBI
LOC102020652
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541420,518,042 - 20,518,983 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541420,518,042 - 20,518,983 (-)NCBIChiLan1.0ChiLan1.0
LOC100973548
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v297,367,719 - 7,374,479 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1117,324,422 - 7,331,182 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0115,082,659 - 5,083,817 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1114,747,778 - 4,748,788 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl114,747,821 - 4,748,765 (-)Ensemblpanpan1.1panPan2
OR51G2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12127,360,385 - 27,372,543 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2127,360,385 - 27,361,326 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2127,119,982 - 27,120,923 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02127,980,913 - 27,981,726 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.12127,394,814 - 27,395,755 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02127,664,654 - 27,665,595 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02127,721,548 - 27,722,489 (-)NCBIUU_Cfam_GSD_1.0
LOC101977911
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494758,609,882 - 58,610,866 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936498209,437 - 210,375 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936498209,418 - 210,402 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC103247927
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1161,884,495 - 61,886,277 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604364,063,256 - 64,064,264 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
LOC101714021
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248176,185,292 - 6,186,233 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248176,185,292 - 6,186,233 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in LOC100737900
483 total Variants

Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000074188   ⟹   ENSSSCP00000060329
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl95,217,183 - 5,223,159 (+)Ensembl
RefSeq Acc Id: XM_021062396   ⟹   XP_020918055
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.195,216,154 - 5,223,998 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_020918055 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000060329
  ENSSSCP00000060329.1
  ENSSSCP00015033727.1
  ENSSSCP00030001255.1
  ENSSSCP00040006120.1
  ENSSSCP00050043636.1
  ENSSSCP00060006241.1
  ENSSSCP00070037266.1
Reference Protein Sequences
RefSeq Acc Id: XP_020918055   ⟸   XM_021062396
- UniProtKB: A0A8D1DF81 (UniProtKB/TrEMBL),   A0A5G2Q841 (UniProtKB/TrEMBL),   A0A4X1V8X3 (UniProtKB/TrEMBL),   A0A8D0V683 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000060329   ⟸   ENSSSCT00000074188
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000043251 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015062433 UniProtKB/TrEMBL
  ENSSSCG00030002542 UniProtKB/TrEMBL
  ENSSSCG00040011862 UniProtKB/TrEMBL
  ENSSSCG00050073535 UniProtKB/TrEMBL
  ENSSSCG00060012151 UniProtKB/TrEMBL
  ENSSSCG00070022257 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000074188 ENTREZGENE
  ENSSSCT00000074188.1 UniProtKB/TrEMBL
  ENSSSCT00015083353.1 UniProtKB/TrEMBL
  ENSSSCT00030003244.1 UniProtKB/TrEMBL
  ENSSSCT00040015560.1 UniProtKB/TrEMBL
  ENSSSCT00050100539.1 UniProtKB/TrEMBL
  ENSSSCT00060015897.1 UniProtKB/TrEMBL
  ENSSSCT00070044234.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
NCBI Gene LOC100737900 ENTREZGENE
PANTHER OLFACTORY RECEPTOR 51G2 UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 56B1-RELATED UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A4X1V8X3 ENTREZGENE, UniProtKB/TrEMBL
  A0A5G2Q841 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0V683 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1DF81 ENTREZGENE, UniProtKB/TrEMBL