NCF4 (neutrophil cytosolic factor 4)

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Gene: NCF4 (neutrophil cytosolic factor 4) Sus scrofa

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Symbol:

NCF4

Name:

neutrophil cytosolic factor 4

RGD ID:

14149629

Description:

ENCODES a protein that exhibits phosphatidylinositol binding (inferred); phosphatidylinositol-3-phosphate binding (inferred); superoxide-generating NADPH oxidase activator activity (inferred); INVOLVED IN phagocytosis (inferred); respiratory burst (inferred); superoxide anion generation (inferred); ASSOCIATED WITH adenylosuccinase lyase deficiency (ortholog); autosomal recessive chronic granulomatous disease 3 (ortholog); chronic granulomatous disease (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); endosome membrane (inferred); INTERACTS WITH deoxynivalenol; lipopolysaccharide

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

NADPH oxidase cytosolic protein p40phox; neutrophil cytosol factor 4

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	10,874,953 - 10,994,014 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	10,876,147 - 10,994,002 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	8,477,878 - 8,593,943 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

adenylosuccinase lyase deficiency (ISO)

autosomal recessive chronic granulomatous disease 3 (ISO)

chronic granulomatous disease (ISO)

Crohn's disease (ISO)

Emery-Dreifuss muscular dystrophy (ISO)

heart disease (ISO)

myoclonic dystonia 26 (ISO)

neurodegeneration with brain iron accumulation 2A (ISO)

rheumatoid arthritis (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

deoxynivalenol (EXP)

lipopolysaccharide (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

phagocytosis (IEA)

respiratory burst (IEA)

superoxide anion generation (IBA,IEA)

Cellular Component

cytoplasm (IBA,IEA)

cytosol (IEA)

endosome membrane (IEA)

membrane (IEA)

NADPH oxidase complex (IBA,IEA)

Molecular Function

phosphatidylinositol binding (IEA)

phosphatidylinositol-3-phosphate binding (IEA)

protein binding (ISO)

superoxide-generating NADPH oxidase activator activity (IBA,IEA)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

NCF4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	10,874,953 - 10,994,014 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	10,876,147 - 10,994,002 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	8,477,878 - 8,593,943 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NCF4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	22	36,861,006 - 36,878,015 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	22	36,860,988 - 36,878,017 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	22	37,257,048 - 37,274,057 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	22	35,586,991 - 35,604,005 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	22	35,581,544 - 35,598,558	NCBI
Celera	22	21,054,984 - 21,075,404 (+)	NCBI		Celera
Cytogenetic Map	22	q12.3	NCBI
HuRef	22	20,219,193 - 20,235,709 (+)	NCBI		HuRef
CHM1_1	22	37,215,777 - 37,232,815 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	22	37,316,866 - 37,336,974 (+)	NCBI		T2T-CHM13v2.0

Ncf4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	78,128,324 - 78,146,782 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	78,129,001 - 78,146,780 (+)	Ensembl		GRCm39 Ensembl
GRCm38	15	78,244,164 - 78,262,582 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	78,244,801 - 78,262,580 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	78,075,241 - 78,093,010 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	78,072,089 - 78,089,829 (+)	NCBI		MGSCv36	mm8
Celera	15	79,705,722 - 79,723,507 (+)	NCBI		Celera
Cytogenetic Map	15	E1	NCBI
cM Map	15	37.1	NCBI

Ncf4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	111,705,926 - 111,723,893 (+)	NCBI		GRCr8
mRatBN7.2	7	109,825,420 - 109,843,389 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	109,826,020 - 109,843,389 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	111,575,804 - 111,592,610 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	113,799,365 - 113,816,171 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	113,768,035 - 113,784,810 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	119,481,711 - 119,499,426 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	119,482,272 - 119,499,425 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	119,473,732 - 119,490,872 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	116,167,621 - 116,190,630 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	7	106,165,444 - 106,181,739 (+)	NCBI		Celera
Cytogenetic Map	7	q34	NCBI

Ncf4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955413	23,388,018 - 23,408,090 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955413	23,388,456 - 23,405,121 (+)	NCBI	ChiLan1.0	ChiLan1.0

NCF4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	23	46,715,341 - 46,735,474 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	22	49,406,644 - 49,426,776 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	22	17,775,590 - 17,795,725 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	22	35,611,589 - 35,631,400 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	22	35,611,589 - 35,631,400 (+)	Ensembl	panpan1.1		panPan2

NCF4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	27,597,296 - 27,672,199 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	27,597,486 - 27,615,261 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	27,551,611 - 27,626,188 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	28,389,229 - 28,463,826 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	28,389,225 - 28,407,201 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	28,110,753 - 28,185,319 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	28,419,256 - 28,493,843 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	28,598,068 - 28,672,687 (-)	NCBI		UU_Cfam_GSD_1.0

Ncf4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	10,991,297 - 11,005,134 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936492	4,001,898 - 4,010,456 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936492	4,001,711 - 4,015,253 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NCF4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	19	19,560,047 - 19,579,342 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	19	19,566,562 - 19,579,352 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666045	106,283,752 - 106,303,762 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ncf4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624752	10,901,934 - 10,918,106 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624752	10,902,035 - 10,918,183 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in NCF4
6064 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_001924811	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013997542	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013997543	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021091535	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000027	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK237150	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK237484	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK393032	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU407327	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU407334	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBZA01000423	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000034941 ⟹ ENSSSCP00000029266

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	5	10,878,442 - 10,897,987 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000036476 ⟹ ENSSSCP00000028669

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	5	10,874,953 - 10,894,080 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000071185 ⟹ ENSSSCP00000069842

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	5	10,874,953 - 10,893,017 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000075176 ⟹ ENSSSCP00000067203

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	5	10,874,953 - 10,892,960 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000075411 ⟹ ENSSSCP00000074298

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	5	10,874,953 - 10,897,885 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000081184 ⟹ ENSSSCP00000070143

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	5	10,875,891 - 10,944,284 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000083107 ⟹ ENSSSCP00000072784

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	5	10,874,953 - 10,893,409 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000087050 ⟹ ENSSSCP00000073420

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	5	10,874,953 - 10,897,885 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000089031 ⟹ ENSSSCP00000069815

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	5	10,875,891 - 10,994,014 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000105262 ⟹ ENSSSCP00000076891

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	5	10,874,953 - 10,886,074 (-)	Ensembl

RefSeq Acc Id:

XM_001924811 ⟹ XP_001924846

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	5	10,876,147 - 10,897,996 (-)	NCBI

Sequence:

show sequence

GTGTGGGCCACAGCCCGTCCCCGACAGCCTGGAGGAGGAGTCTCTTCTTAAGTTGAGAGGTTTG
GGGTGGGCCCCCCGCCCCCAAAGGCGGCTCCGGGGACACCTGGGACCACGGCTGAGACGTGTGG
TGGCTGGAGGGAAGTGAGAGGTGGCCTCGGCCTGGGCCGGGCTGGGCGAGACCCTCCACCACCC
ACTCCCCTGGACCACTGATGGCCATGGCCGTGGCCCAGCAGCTGCGGGCTGAGAGCGACTTCGC
CCAGCTTCCTGACGACATTGCCGTCTCAGCCAACATCGCGGACATCGAGGAGAAGAGAGGCTTC
ACCAGCCACTTTGTTTTCGTCATCGAGGTGAAGACGAAAGGGGGGTGCAAGTACCTCATTTACC
GTCGCTACCGCCAGTTCTACGCCTTGCAGAGCAAACTGGAGGAGCGCTTCGGGCCGGAGAGCAA
GACCAGCCCCTTCACCTGCGTCCTGCCCACGCTCCCAGCCAAAGTCTACGTGGGTGTGAAACAG
GAGATTGCCGAGATGCGGATACCCGCCCTCAACGCCTACATGAAGAACCTCCTCAGCCTGCCCA
TCTGTGTGCTGATGGATGAGGATGTCCGGATCTTCTTCTACCAGTCATCCTACGATGCGGAGCA
GGTGCCCCAGGGGCTCCGCCGGCTCCGCCCGCGCACCCGGAAAGTGAAGAGCGAGTCCCCACAA
GGTGCCAGCCTTGACCGCATGGCAGCTCCACGAGCAGAGGCCCTGTTTGATTTCACTGGGAACA
GCAAACTGGAGCTGAATTTCAAAGTCGGAGATGTGATCTTCCTTCTCAGTCGGATTAATAAAGA
CTGGTTGGAGGGCACTCTCCGCGGAACCACGGGCATCTTCCCAGCGTCCTTTGTGAAGATCCTC
AAGGACTTCCCGGAAGAGGAGGACCCCACCAACTGGCTGCGCTGCTGCTTCTATGAGGACTCCG
TCAGCACCACCAAGGACATCGCGGTGGAGGAAGACCTCACCAGCACCCCACTCTACAAGGACTT
GCTGGAGCTTGTGAGGCGGGAGTTCCAGAGGGAGGACCTTGCCCTCAACTACAGGGACGCCGAG
GGGGATCTGGTTCGGCTGCTCTCGGACGAGGACGTGCAGCTCATGGTGAGACAGGCCCAAGGCC
TCCCCTCCCAGAAGCGCCTCTTCCCCTGGAAGCTGCATATCACCCAGAAGGACAACTACAAGGT
CTACAACACGGTTCCCTGAGCTGCTGGTGTCCCTGGGGCCGTGAGGGGACGCCCAGCAAGGAGC
CCTCCGAGGGAATGGGGACCAAGAAAGGCCGGGAGCACAGGGCAGGCTTCCTGGTTCTGTATCC
ATCGGACCTGCTGGGCGTGGCTCGTGCGGTCTCGACATCTGGTCTCTGAATTAAATAAACCATT
TCATCTCCAAGGGCCAGACGGGGGAAGATGGTATCTTTTGAGAAAAGAGAGGAGAGGAAGTAAA
ATACCACTCATGAGCATCAGTGAGGGGTCATTTACATACGGGCGGGTCCTGGCGTTGCTGGGCC
TCTAATGCAGCCCCCTAGTCCCCTTGCCTTGTCCTCATGTGTGGAGAAACCCAGGGACACTCGT
GTTCCTGATGGCCACTCCTTCTGGCGCCCTTTCCTGGGACTGACCACCTGCCGCACGGAAGTCA
TCTTCCTTAGGGTGCTCTCGGGGTCAGGCCAAGGCCAAGGCCAAGGCCAAACCCTCTGTCTTGG
ATGCAGCCAAGAAGATGGGGGACCCCTCTCCCCTCAGCTCTCAGGCTTTTGCCACCCTCCCCCA
AAAAGGGCAGGCTGCCCAGCACCCTACACCCCTACACCCCACCCTGGGCTGTGGGGGTGCTGCT
CCGGGCCCTCACAGCCCCCACATCAGTGTGCAGGGCCACCAAGACAAAGTACCCCACAGCAGGC
ACTCAGTGTCTCACAGGTCGAGAGCCTGGAAGACCGAACTCCAGGTGTCAGCAGGGTCTTGCTT
CCATGAAGCCTGTTGGAAAACCTTCTTTGCCTCTTGCTAGCTGCTGGTCTTTTTCTGGCATTCC
TTGGCTTGTAGAGGCTTCACTCCACTCCTCCAATTATATGTAGTATGTTTTGCTTTTTAGGGCC
TCACCCTCGGCATATGGAGGTTCCCAGGCTAGGGGTCTAATCGAAGCTACAGCTGCCGGCCTAC
ACCACAGCCACAGCAACCCTGGATCCGAGCCGCGTCTGTGACCGACACTACAGCTCACCGCAAT
GCCAGATCCCCGACCCAATGAGCGAGGCTAGGGATCGAATCTGTATCCTCATGGATACTCGTCA
GATTCATTTCCGCCGAGTCATGATGGAAACTCCCAAGAGAAGGTCTTAAAAGCTGTCAGAGAAA
GTGGAGGTCACTGCAAAATAACAAAAAGTCAGAATGAGAAGCAGACTTTTCAACTATACCAATG
GAAGCTGAAGCCAATATAATTACAGCTGCAGATTTTTGCGAGAAAACCTCTCTCGGTCTGGAAT
TTATCGGCTTCATAGAACTATCTGTCGATAATGAAGGCAAAATGAATCAAGCATGGATACAGGA
ATTCCCGTCATTGCACCACAGAAACAAATTCAACCAGGAACCACGAGGTTTCGGATTCGGTCCC
CTGGCTTCCATCAGTGGGTTAAGGATCCAGCGTTGCCGTGAGCTGTGGTGTGGGTTGCAGACGT
GGCTCGGGTCTGGCGTTGCTGTGGCTGTGGTGTAGGCCGGCGGCTATAGCTCTGATTAGACCTC
TAGCCTGGGACCCTCCATATGCTGTGAGTGTGGCTCTAAAAAGCCAAAAAAAAAGTATGGATAC
AAACCAAATCTGTTAACAAGATCCCTGAACTAAAAGTATCTCTAAAGTATATGCTTCGAGAAGA
AGGAAAACGGCCCTTGAGGAATAGAGTCTGAGATTCAAAAATAAATGATCCACAAAAACAAAGG
TGAGCATATTTTTGGACTTGGGTTGACTTAGCTAAGCTGGTACTTTATTTCCGAGAATTTCCAT
CCCTGCCTAGATCCAGGATGGCGTGGGCCACAAGACACATTTTGCCAGAGACATTTAGAAAGCC
ATTGTGAAGCGGCAGGCAACCTCTTTTCAGTTCAGATAAGAAGTGGTGTCCCTTATCGGGCAAA
CAGGACGGGAGGGGTAACCCGGGAAATATTTTCTGCCTGATGAGCAACCACTTTGTGCCAGTGG
TGCGCAGGCATCCTGGACGAGGAAAAAACACTCCTGCGATGTTATCATCTTTCCTGGAGAATCG
CTCACGCACAACCCCTTCCTGAACGTCGACTGGAAAGCAGTGTTGCAGCGTTTATTGCTCCCTC
GTGGGATTTGTGCATTACAGCCCGTGTACAAAGAATTTTCGAGCAAGGATACACACATTGTTTT
TCCAGGCGGTGTGTCTGCTACAATCGCAGAGCCTAAGACTCCATCACTTCTGAAAGAGTTCAGT
CTTCAAAGTGCCGTTTCCGTGACTGCCAACATTTAGATGGATGCTGATAAATGACTGCTGGCAA
ATGCTGATGCAGACTCGGTCTGCGGTGACGCCAGCTCTCCCCACTGACCCACAGACAGCCATGA
GCTTTAGACAGTTAGGACATAGGCTTCCATGTTTTGTTCCTGTTTTGTTTGGAGTCCCGCAGAC
TTCATCTAAAATGCAGAGAAGAGTTAAGGGCTTGGAATAGTAAATAAAGTCCTGAAGGAGTTC

hide sequence

RefSeq Acc Id:

XM_013997542 ⟹ XP_013852996

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	5	10,876,147 - 10,897,996 (-)	NCBI

Sequence:

show sequence

GTGTGGGCCACAGCCCGTCCCCGACAGCCTGGAGGAGGAGTCTCTTCTTAAGTTGAGAGGTTTG
GGGTGGGCCCCCCGCCCCCAAAGGCGGCTCCGGGGACACCTGGGACCACGGCTGAGACGTGTGG
TGGCTGGAGGGAAGTGAGAGGTGGCCTCGGCCTGGGCCGGGCTGGGCGAGACCCTCCACCACCC
ACTCCCCTGGACCACTGATGGCCATGGCCGTGGCCCAGCAGCTGCGGGCTGAGAGCGACTTCGC
CCAGCTTCCTGACGACATTGCCGTCTCAGCCAACATCGCGGACATCGAGGAGAAGAGAGGCTTC
ACCAGCCACTTTGTTTTCGTCATCGAGGTGAAGACGAAAGGGGGGTGCAAGTACCTCATTTACC
GTCGCTACCGCCAGTTCTACGCCTTGCAGAGCAAACTGGAGGAGCGCTTCGGGCCGGAGAGCAA
GACCAGCCCCTTCACCTGCGTCCTGCCCACGCTCCCAGCCAAAGTCTACGTGGGTGTGAAACAG
GAGATTGCCGAGATGCGGATACCCGCCCTCAACGCCTACATGAAGAACCTCCTCAGCCTGCCCA
TCTGTGTGCTGATGGATGAGGATGTCCGGATCTTCTTCTACCAGTCATCCTACGATGCGGAGCA
GGTGCCCCAGGGGCTCCGCCGGCTCCGCCCGCGCACCCGGAAAGTGAAGAGCGAGTCCCCACAA
GGTGCCAGCCTTGACCGCATGGCAGCTCCACGAGCAGAGGCCCTGTTTGATTTCACTGGGAACA
GCAAACTGGAGCTGAATTTCAAAGTCGGAGATGTGATCTTCCTTCTCAGTCGGATTAATAAAGA
CTGGTTGGAGGTAAGATTGGAGGGCACTCTCCGCGGAACCACGGGCATCTTCCCAGCGTCCTTT
GTGAAGATCCTCAAGGACTTCCCGGAAGAGGAGGACCCCACCAACTGGCTGCGCTGCTGCTTCT
ATGAGGACTCCGTCAGCACCACCAAGGACATCGCGGTGGAGGAAGACCTCACCAGCACCCCACT
CTACAAGGACTTGCTGGAGCTTGTGAGGCGGGAGTTCCAGAGGGAGGACCTTGCCCTCAACTAC
AGGGACGCCGAGGGGGATCTGGTTCGGCTGCTCTCGGACGAGGACGTGCAGCTCATGGTGAGAC
AGGCCCAAGGCCTCCCCTCCCAGAAGCGCCTCTTCCCCTGGAAGCTGCATATCACCCAGAAGGA
CAACTACAAGGTCTACAACACGGTTCCCTGAGCTGCTGGTGTCCCTGGGGCCGTGAGGGGACGC
CCAGCAAGGAGCCCTCCGAGGGAATGGGGACCAAGAAAGGCCGGGAGCACAGGGCAGGCTTCCT
GGTTCTGTATCCATCGGACCTGCTGGGCGTGGCTCGTGCGGTCTCGACATCTGGTCTCTGAATT
AAATAAACCATTTCATCTCCAAGGGCCAGACGGGGGAAGATGGTATCTTTTGAGAAAAGAGAGG
AGAGGAAGTAAAATACCACTCATGAGCATCAGTGAGGGGTCATTTACATACGGGCGGGTCCTGG
CGTTGCTGGGCCTCTAATGCAGCCCCCTAGTCCCCTTGCCTTGTCCTCATGTGTGGAGAAACCC
AGGGACACTCGTGTTCCTGATGGCCACTCCTTCTGGCGCCCTTTCCTGGGACTGACCACCTGCC
GCACGGAAGTCATCTTCCTTAGGGTGCTCTCGGGGTCAGGCCAAGGCCAAGGCCAAGGCCAAAC
CCTCTGTCTTGGATGCAGCCAAGAAGATGGGGGACCCCTCTCCCCTCAGCTCTCAGGCTTTTGC
CACCCTCCCCCAAAAAGGGCAGGCTGCCCAGCACCCTACACCCCTACACCCCACCCTGGGCTGT
GGGGGTGCTGCTCCGGGCCCTCACAGCCCCCACATCAGTGTGCAGGGCCACCAAGACAAAGTAC
CCCACAGCAGGCACTCAGTGTCTCACAGGTCGAGAGCCTGGAAGACCGAACTCCAGGTGTCAGC
AGGGTCTTGCTTCCATGAAGCCTGTTGGAAAACCTTCTTTGCCTCTTGCTAGCTGCTGGTCTTT
TTCTGGCATTCCTTGGCTTGTAGAGGCTTCACTCCACTCCTCCAATTATATGTAGTATGTTTTG
CTTTTTAGGGCCTCACCCTCGGCATATGGAGGTTCCCAGGCTAGGGGTCTAATCGAAGCTACAG
CTGCCGGCCTACACCACAGCCACAGCAACCCTGGATCCGAGCCGCGTCTGTGACCGACACTACA
GCTCACCGCAATGCCAGATCCCCGACCCAATGAGCGAGGCTAGGGATCGAATCTGTATCCTCAT
GGATACTCGTCAGATTCATTTCCGCCGAGTCATGATGGAAACTCCCAAGAGAAGGTCTTAAAAG
CTGTCAGAGAAAGTGGAGGTCACTGCAAAATAACAAAAAGTCAGAATGAGAAGCAGACTTTTCA
ACTATACCAATGGAAGCTGAAGCCAATATAATTACAGCTGCAGATTTTTGCGAGAAAACCTCTC
TCGGTCTGGAATTTATCGGCTTCATAGAACTATCTGTCGATAATGAAGGCAAAATGAATCAAGC
ATGGATACAGGAATTCCCGTCATTGCACCACAGAAACAAATTCAACCAGGAACCACGAGGTTTC
GGATTCGGTCCCCTGGCTTCCATCAGTGGGTTAAGGATCCAGCGTTGCCGTGAGCTGTGGTGTG
GGTTGCAGACGTGGCTCGGGTCTGGCGTTGCTGTGGCTGTGGTGTAGGCCGGCGGCTATAGCTC
TGATTAGACCTCTAGCCTGGGACCCTCCATATGCTGTGAGTGTGGCTCTAAAAAGCCAAAAAAA
AAGTATGGATACAAACCAAATCTGTTAACAAGATCCCTGAACTAAAAGTATCTCTAAAGTATAT
GCTTCGAGAAGAAGGAAAACGGCCCTTGAGGAATAGAGTCTGAGATTCAAAAATAAATGATCCA
CAAAAACAAAGGTGAGCATATTTTTGGACTTGGGTTGACTTAGCTAAGCTGGTACTTTATTTCC
GAGAATTTCCATCCCTGCCTAGATCCAGGATGGCGTGGGCCACAAGACACATTTTGCCAGAGAC
ATTTAGAAAGCCATTGTGAAGCGGCAGGCAACCTCTTTTCAGTTCAGATAAGAAGTGGTGTCCC
TTATCGGGCAAACAGGACGGGAGGGGTAACCCGGGAAATATTTTCTGCCTGATGAGCAACCACT
TTGTGCCAGTGGTGCGCAGGCATCCTGGACGAGGAAAAAACACTCCTGCGATGTTATCATCTTT
CCTGGAGAATCGCTCACGCACAACCCCTTCCTGAACGTCGACTGGAAAGCAGTGTTGCAGCGTT
TATTGCTCCCTCGTGGGATTTGTGCATTACAGCCCGTGTACAAAGAATTTTCGAGCAAGGATAC
ACACATTGTTTTTCCAGGCGGTGTGTCTGCTACAATCGCAGAGCCTAAGACTCCATCACTTCTG
AAAGAGTTCAGTCTTCAAAGTGCCGTTTCCGTGACTGCCAACATTTAGATGGATGCTGATAAAT
GACTGCTGGCAAATGCTGATGCAGACTCGGTCTGCGGTGACGCCAGCTCTCCCCACTGACCCAC
AGACAGCCATGAGCTTTAGACAGTTAGGACATAGGCTTCCATGTTTTGTTCCTGTTTTGTTTGG
AGTCCCGCAGACTTCATCTAAAATGCAGAGAAGAGTTAAGGGCTTGGAATAGTAAATAAAGTCC
TGAAGGAGTTC

hide sequence

RefSeq Acc Id:

XM_013997543 ⟹ XP_013852997

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	5	10,876,147 - 10,994,002 (-)	NCBI

Sequence:

show sequence

TGGAAAGTTCAGGGAAAAACAGCTCCAACAACTTATATCCAGAAGCGGTGATAAAAGCAGCTTT
CTGATTGGCCAGAGGCTGGCTTGGACCATCTCGGGAGGAACGCGTACCCTCCTCCCCTTCTGGA
AGTGGGTTCGCCCACGGAGGGGGCCAGTTGGGAGCGCGGGAGACTGGAGCGGCGCCTGCGCAGT
GGACAAGGTGCAGTTGCCCAAGCGGAACTTTGAACCCGCTCTGTTGGGCCGAGGTTCTTGTCGC
CCCCTCAAGTCCCAGATTCCGGGGAGAGCGACGTAAGCTGCATCAAGAAATCTAGTCCTTGGCT
CGCATCTCACAGGGAAATCTGATTTTTAAAGCCCGAGAATGTCATGCTTTAAAATGTAAAATAG
GAAAGTGTTGAAAGTGATGTCTGTGGACAAAGAGAGAACAAGTGAGTTTAATGTGGGGGAGCAG
CGGGACTCAGACACTTGAAGCCCTACTTTCCTGAGTCCAGCCCCTCTTGTAAAATGGAGAATAT
ATCACATACCGCACATCATCGAATGAAAGCCAGCCCCAGGACACTCCCCATCCCACAGGGAGGC
TCCGAGGATGTCTGTTGACTTTCTGGGGGAGGCTCCTCTTGCTGAAAGAGGAACCTCAGACTGA
AATCACTGCCGCCGCCGTCTTCCTGACCTGGTGACCATCGTGGCACATCGCCTCGCCCCTGAGC
CTGTTTCCTCGTTAAAAATGGGCTAGTGGAACCCACCTCCTGGGGTTGTCCTGACGCTCAAAAG
AAGGTCTGTAAGTGCCTGGAACATAGTAGGGGCTCAACAGTGAGGAATGGATGAATGAGAAGAG
ATTCATCTGGACAAATTTCATTGATCATCACTGCCGTATGCCAGGTGCAGGCACCCCTGTTCTG
CCTCTGCTGGGGCCCCCTGGGATGGCTGGTGCTGAGCAGGAAGATGCCCTCAGTGAAGGTGCCT
GCCCCCGGGGGTTTGTCATCACAGGCCTTTCAGTTACCTGGAACTTGCCTCACCTGCTCAGTGT
CTCCCTGTGGCTACCAGCCTTGCGCTGGGCCATGAACACACATACACTCCACACATTTCTGTGG
ATGCTTCAGCCTTGAATTGGGAGTGAAACAGAGCAAGCTGCCTGGAAGTTTCTTTCCTTGGGAC
TCATTCCTGGTATTGTGATTAAGATGTGTCTCCTGCCTTCCCCTCACCTACTTGTCTTCTTTGG
AAACATCATGCAAGTCTGTCTCAGACACCCCAGGCCTCGGAGGCGGGACGGAAGGCATTTGCCA
CCCTTTCCAATATGCGTCTCTGAGATGCCATGTCCCCAGCCTGCCAGACCCTAGGGGGCCTCAG
ATGGGAAGCCTGAGGCTTGGAGGAAATAGAACACATCCAGGGACTTGGCGGAGCAAGGATTCAC
ACCCAGGCCCATGGATCAGCCTCTGGATCCTGAAGGAGGCGACTTCGCCCAGCTTCCTGACGAC
ATTGCCGTCTCAGCCAACATCGCGGACATCGAGGAGAAGAGAGGCTTCACCAGCCACTTTGTTT
TCGTCATCGAGGTGAAGACGAAAGGGGGGTGCAAGTACCTCATTTACCGTCGCTACCGCCAGTT
CTACGCCTTGCAGAGCAAACTGGAGGAGCGCTTCGGGCCGGAGAGCAAGACCAGCCCCTTCACC
TGCGTCCTGCCCACGCTCCCAGCCAAAGTCTACGTGGGTGTGAAACAGGAGATTGCCGAGATGC
GGATACCCGCCCTCAACGCCTACATGAAGAACCTCCTCAGCCTGCCCATCTGTGTGCTGATGGA
TGAGGATGTCCGGATCTTCTTCTACCAGTCATCCTACGATGCGGAGCAGGTGCCCCAGGGGCTC
CGCCGGCTCCGCCCGCGCACCCGGAAAGTGAAGAGCGAGTCCCCACAAGGTGCCAGCCTTGACC
GCATGGCAGCTCCACGAGCAGAGGCCCTGTTTGATTTCACTGGGAACAGCAAACTGGAGCTGAA
TTTCAAAGTCGGAGATGTGATCTTCCTTCTCAGTCGGATTAATAAAGACTGGTTGGAGGTAAGA
TTGGAGGGCACTCTCCGCGGAACCACGGGCATCTTCCCAGCGTCCTTTGTGAAGATCCTCAAGG
ACTTCCCGGAAGAGGAGGACCCCACCAACTGGCTGCGCTGCTGCTTCTATGAGGACTCCGTCAG
CACCACCAAGGACATCGCGGTGGAGGAAGACCTCACCAGCACCCCACTCTACAAGGACTTGCTG
GAGCTTGTGAGGCGGGAGTTCCAGAGGGAGGACCTTGCCCTCAACTACAGGGACGCCGAGGGGG
ATCTGGTTCGGCTGCTCTCGGACGAGGACGTGCAGCTCATGGTGAGACAGGCCCAAGGCCTCCC
CTCCCAGAAGCGCCTCTTCCCCTGGAAGCTGCATATCACCCAGAAGGACAACTACAAGGTCTAC
AACACGGTTCCCTGAGCTGCTGGTGTCCCTGGGGCCGTGAGGGGACGCCCAGCAAGGAGCCCTC
CGAGGGAATGGGGACCAAGAAAGGCCGGGAGCACAGGGCAGGCTTCCTGGTTCTGTATCCATCG
GACCTGCTGGGCGTGGCTCGTGCGGTCTCGACATCTGGTCTCTGAATTAAATAAACCATTTCAT
CTCCAAGGGCCAGACGGGGGAAGATGGTATCTTTTGAGAAAAGAGAGGAGAGGAAGTAAAATAC
CACTCATGAGCATCAGTGAGGGGTCATTTACATACGGGCGGGTCCTGGCGTTGCTGGGCCTCTA
ATGCAGCCCCCTAGTCCCCTTGCCTTGTCCTCATGTGTGGAGAAACCCAGGGACACTCGTGTTC
CTGATGGCCACTCCTTCTGGCGCCCTTTCCTGGGACTGACCACCTGCCGCACGGAAGTCATCTT
CCTTAGGGTGCTCTCGGGGTCAGGCCAAGGCCAAGGCCAAGGCCAAACCCTCTGTCTTGGATGC
AGCCAAGAAGATGGGGGACCCCTCTCCCCTCAGCTCTCAGGCTTTTGCCACCCTCCCCCAAAAA
GGGCAGGCTGCCCAGCACCCTACACCCCTACACCCCACCCTGGGCTGTGGGGGTGCTGCTCCGG
GCCCTCACAGCCCCCACATCAGTGTGCAGGGCCACCAAGACAAAGTACCCCACAGCAGGCACTC
AGTGTCTCACAGGTCGAGAGCCTGGAAGACCGAACTCCAGGTGTCAGCAGGGTCTTGCTTCCAT
GAAGCCTGTTGGAAAACCTTCTTTGCCTCTTGCTAGCTGCTGGTCTTTTTCTGGCATTCCTTGG
CTTGTAGAGGCTTCACTCCACTCCTCCAATTATATGTAGTATGTTTTGCTTTTTAGGGCCTCAC
CCTCGGCATATGGAGGTTCCCAGGCTAGGGGTCTAATCGAAGCTACAGCTGCCGGCCTACACCA
CAGCCACAGCAACCCTGGATCCGAGCCGCGTCTGTGACCGACACTACAGCTCACCGCAATGCCA
GATCCCCGACCCAATGAGCGAGGCTAGGGATCGAATCTGTATCCTCATGGATACTCGTCAGATT
CATTTCCGCCGAGTCATGATGGAAACTCCCAAGAGAAGGTCTTAAAAGCTGTCAGAGAAAGTGG
AGGTCACTGCAAAATAACAAAAAGTCAGAATGAGAAGCAGACTTTTCAACTATACCAATGGAAG
CTGAAGCCAATATAATTACAGCTGCAGATTTTTGCGAGAAAACCTCTCTCGGTCTGGAATTTAT
CGGCTTCATAGAACTATCTGTCGATAATGAAGGCAAAATGAATCAAGCATGGATACAGGAATTC
CCGTCATTGCACCACAGAAACAAATTCAACCAGGAACCACGAGGTTTCGGATTCGGTCCCCTGG
CTTCCATCAGTGGGTTAAGGATCCAGCGTTGCCGTGAGCTGTGGTGTGGGTTGCAGACGTGGCT
CGGGTCTGGCGTTGCTGTGGCTGTGGTGTAGGCCGGCGGCTATAGCTCTGATTAGACCTCTAGC
CTGGGACCCTCCATATGCTGTGAGTGTGGCTCTAAAAAGCCAAAAAAAAAGTATGGATACAAAC
CAAATCTGTTAACAAGATCCCTGAACTAAAAGTATCTCTAAAGTATATGCTTCGAGAAGAAGGA
AAACGGCCCTTGAGGAATAGAGTCTGAGATTCAAAAATAAATGATCCACAAAAACAAAGGTGAG
CATATTTTTGGACTTGGGTTGACTTAGCTAAGCTGGTACTTTATTTCCGAGAATTTCCATCCCT
GCCTAGATCCAGGATGGCGTGGGCCACAAGACACATTTTGCCAGAGACATTTAGAAAGCCATTG
TGAAGCGGCAGGCAACCTCTTTTCAGTTCAGATAAGAAGTGGTGTCCCTTATCGGGCAAACAGG
ACGGGAGGGGTAACCCGGGAAATATTTTCTGCCTGATGAGCAACCACTTTGTGCCAGTGGTGCG
CAGGCATCCTGGACGAGGAAAAAACACTCCTGCGATGTTATCATCTTTCCTGGAGAATCGCTCA
CGCACAACCCCTTCCTGAACGTCGACTGGAAAGCAGTGTTGCAGCGTTTATTGCTCCCTCGTGG
GATTTGTGCATTACAGCCCGTGTACAAAGAATTTTCGAGCAAGGATACACACATTGTTTTTCCA
GGCGGTGTGTCTGCTACAATCGCAGAGCCTAAGACTCCATCACTTCTGAAAGAGTTCAGTCTTC
AAAGTGCCGTTTCCGTGACTGCCAACATTTAGATGGATGCTGATAAATGACTGCTGGCAAATGC
TGATGCAGACTCGGTCTGCGGTGACGCCAGCTCTCCCCACTGACCCACAGACAGCCATGAGCTT
TAGACAGTTAGGACATAGGCTTCCATGTTTTGTTCCTGTTTTGTTTGGAGTCCCGCAGACTTCA
TCTAAAATGCAGAGAAGAGTTAAGGGCTTGGAATAGTAAATAAAGTCCTGAAGGAGTTC

hide sequence

RefSeq Acc Id:

XM_021091535 ⟹ XP_020947194

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	5	10,876,147 - 10,994,002 (-)	NCBI

Sequence:

show sequence

TGGAAAGTTCAGGGAAAAACAGCTCCAACAACTTATATCCAGAAGCGGTGATAAAAGCAGCTTT
CTGATTGGCCAGAGGCTGGCTTGGACCATCTCGGGAGGAACGCGTACCCTCCTCCCCTTCTGGA
AGTGGGTTCGCCCACGGAGGGGGCCAGTTGGGAGCGCGGGAGACTGGAGCGGCGCCTGCGCAGT
GGACAAGGTGCAGTTGCCCAAGCGGAACTTTGAACCCGCTCTGTTGGGCCGAGGTTCTTGTCGC
CCCCTCAAGTCCCAGATTCCGGGGAGAGCGACGTAAGCTGCATCAAGAAATCTAGTCCTTGGCT
CGCATCTCACAGGGAAATCTGATTTTTAAAGCCCGAGAATGTCATGCTTTAAAATGTAAAATAG
GAAAGTGTTGAAAGTGATGTCTGTGGACAAAGAGAGAACAAGTGAGTTTAATGTGGGGGAGCAG
CGGGACTCAGACACTTGAAGCCCTACTTTCCTGAGTCCAGCCCCTCTTGTAAAATGGAGAATAT
ATCACATACCGCACATCATCGAATGAAAGCCAGCCCCAGGACACTCCCCATCCCACAGGGAGGC
TCCGAGGATGTCTGTTGACTTTCTGGGGGAGGCTCCTCTTGCTGAAAGAGGAACCTCAGACTGA
AATCACTGCCGCCGCCGTCTTCCTGACCTGGTGACCATCGTGGCACATCGCCTCGCCCCTGAGC
CTGTTTCCTCGTTAAAAATGGGCTAGTGGAACCCACCTCCTGGGGTTGTCCTGACGCTCAAAAG
AAGGTCTGTAAGTGCCTGGAACATAGTAGGGGCTCAACAGTGAGGAATGGATGAATGAGAAGAG
ATTCATCTGGACAAATTTCATTGATCATCACTGCCGTATGCCAGGTGCAGGCACCCCTGTTCTG
CCTCTGCTGGGGCCCCCTGGGATGGCTGGTGCTGAGCAGGAAGATGCCCTCAGTGAAGGTGCCT
GCCCCCGGGGGTTTGTCATCACAGGCCTTTCAGTTACCTGGAACTTGCCTCACCTGCTCAGTGT
CTCCCTGTGGCTACCAGCCTTGCGCTGGGCCATGAACACACATACACTCCACACATTTCTGTGG
ATGCTTCAGCCTTGAATTGGGAGTGAAACAGAGCAAGCTGCCTGGAAGTTTCTTTCCTTGGGAC
TCATTCCTGGTATTGTGATTAAGATGTGTCTCCTGCCTTCCCCTCACCTACTTGTCTTCTTTGG
AAACATCATGCAAGTCTGTCTCAGACACCCCAGGCCTCGGAGGCGGGACGGAAGGCATTTGCCA
CCCTTTCCAATATGCGTCTCTGAGATGCCATGTCCCCAGCCTGCCAGACCCTAGGGGGCCTCAG
ATGGGAAGCCTGAGGCTTGGAGGAAATAGAACACATCCAGGGACTTGGCGGAGCAAGGATTCAC
ACCCAGGCCCATGGATCAGCCTCTGGATCCTGAAGGAGGCGACTTCGCCCAGCTTCCTGACGAC
ATTGCCGTCTCAGCCAACATCGCGGACATCGAGGAGAAGAGAGGCTTCACCAGCCACTTTGTTT
TCGTCATCGAGGTGAAGACGAAAGGGGGGTGCAAGTACCTCATTTACCGTCGCTACCGCCAGTT
CTACGCCTTGCAGAGCAAACTGGAGGAGCGCTTCGGGCCGGAGAGCAAGACCAGCCCCTTCACC
TGCGTCCTGCCCACGCTCCCAGCCAAAGTCTACGTGGGTGTGAAACAGGAGATTGCCGAGATGC
GGATACCCGCCCTCAACGCCTACATGAAGAACCTCCTCAGCCTGCCCATCTGTGTGCTGATGGA
TGAGGATGTCCGGATCTTCTTCTACCAGTCATCCTACGATGCGGAGCAGGTGCCCCAGGGGCTC
CGCCGGCTCCGCCCGCGCACCCGGAAAGTGAAGAGCGAGTCCCCACAAGGTGCCAGCCTTGACC
GCATGGCAGCTCCACGAGCAGAGGCCCTGTTTGATTTCACTGGGAACAGCAAACTGGAGCTGAA
TTTCAAAGTCGGAGATGTGATCTTCCTTCTCAGTCGGATTAATAAAGACTGGTTGGAGGGCACT
CTCCGCGGAACCACGGGCATCTTCCCAGCGTCCTTTGTGAAGATCCTCAAGGACTTCCCGGAAG
AGGAGGACCCCACCAACTGGCTGCGCTGCTGCTTCTATGAGGACTCCGTCAGCACCACCAAGGA
CATCGCGGTGGAGGAAGACCTCACCAGCACCCCACTCTACAAGGACTTGCTGGAGCTTGTGAGG
CGGGAGTTCCAGAGGGAGGACCTTGCCCTCAACTACAGGGACGCCGAGGGGGATCTGGTTCGGC
TGCTCTCGGACGAGGACGTGCAGCTCATGGTGAGACAGGCCCAAGGCCTCCCCTCCCAGAAGCG
CCTCTTCCCCTGGAAGCTGCATATCACCCAGAAGGACAACTACAAGGTCTACAACACGGTTCCC
TGAGCTGCTGGTGTCCCTGGGGCCGTGAGGGGACGCCCAGCAAGGAGCCCTCCGAGGGAATGGG
GACCAAGAAAGGCCGGGAGCACAGGGCAGGCTTCCTGGTTCTGTATCCATCGGACCTGCTGGGC
GTGGCTCGTGCGGTCTCGACATCTGGTCTCTGAATTAAATAAACCATTTCATCTCCAAGGGCCA
GACGGGGGAAGATGGTATCTTTTGAGAAAAGAGAGGAGAGGAAGTAAAATACCACTCATGAGCA
TCAGTGAGGGGTCATTTACATACGGGCGGGTCCTGGCGTTGCTGGGCCTCTAATGCAGCCCCCT
AGTCCCCTTGCCTTGTCCTCATGTGTGGAGAAACCCAGGGACACTCGTGTTCCTGATGGCCACT
CCTTCTGGCGCCCTTTCCTGGGACTGACCACCTGCCGCACGGAAGTCATCTTCCTTAGGGTGCT
CTCGGGGTCAGGCCAAGGCCAAGGCCAAGGCCAAACCCTCTGTCTTGGATGCAGCCAAGAAGAT
GGGGGACCCCTCTCCCCTCAGCTCTCAGGCTTTTGCCACCCTCCCCCAAAAAGGGCAGGCTGCC
CAGCACCCTACACCCCTACACCCCACCCTGGGCTGTGGGGGTGCTGCTCCGGGCCCTCACAGCC
CCCACATCAGTGTGCAGGGCCACCAAGACAAAGTACCCCACAGCAGGCACTCAGTGTCTCACAG
GTCGAGAGCCTGGAAGACCGAACTCCAGGTGTCAGCAGGGTCTTGCTTCCATGAAGCCTGTTGG
AAAACCTTCTTTGCCTCTTGCTAGCTGCTGGTCTTTTTCTGGCATTCCTTGGCTTGTAGAGGCT
TCACTCCACTCCTCCAATTATATGTAGTATGTTTTGCTTTTTAGGGCCTCACCCTCGGCATATG
GAGGTTCCCAGGCTAGGGGTCTAATCGAAGCTACAGCTGCCGGCCTACACCACAGCCACAGCAA
CCCTGGATCCGAGCCGCGTCTGTGACCGACACTACAGCTCACCGCAATGCCAGATCCCCGACCC
AATGAGCGAGGCTAGGGATCGAATCTGTATCCTCATGGATACTCGTCAGATTCATTTCCGCCGA
GTCATGATGGAAACTCCCAAGAGAAGGTCTTAAAAGCTGTCAGAGAAAGTGGAGGTCACTGCAA
AATAACAAAAAGTCAGAATGAGAAGCAGACTTTTCAACTATACCAATGGAAGCTGAAGCCAATA
TAATTACAGCTGCAGATTTTTGCGAGAAAACCTCTCTCGGTCTGGAATTTATCGGCTTCATAGA
ACTATCTGTCGATAATGAAGGCAAAATGAATCAAGCATGGATACAGGAATTCCCGTCATTGCAC
CACAGAAACAAATTCAACCAGGAACCACGAGGTTTCGGATTCGGTCCCCTGGCTTCCATCAGTG
GGTTAAGGATCCAGCGTTGCCGTGAGCTGTGGTGTGGGTTGCAGACGTGGCTCGGGTCTGGCGT
TGCTGTGGCTGTGGTGTAGGCCGGCGGCTATAGCTCTGATTAGACCTCTAGCCTGGGACCCTCC
ATATGCTGTGAGTGTGGCTCTAAAAAGCCAAAAAAAAAGTATGGATACAAACCAAATCTGTTAA
CAAGATCCCTGAACTAAAAGTATCTCTAAAGTATATGCTTCGAGAAGAAGGAAAACGGCCCTTG
AGGAATAGAGTCTGAGATTCAAAAATAAATGATCCACAAAAACAAAGGTGAGCATATTTTTGGA
CTTGGGTTGACTTAGCTAAGCTGGTACTTTATTTCCGAGAATTTCCATCCCTGCCTAGATCCAG
GATGGCGTGGGCCACAAGACACATTTTGCCAGAGACATTTAGAAAGCCATTGTGAAGCGGCAGG
CAACCTCTTTTCAGTTCAGATAAGAAGTGGTGTCCCTTATCGGGCAAACAGGACGGGAGGGGTA
ACCCGGGAAATATTTTCTGCCTGATGAGCAACCACTTTGTGCCAGTGGTGCGCAGGCATCCTGG
ACGAGGAAAAAACACTCCTGCGATGTTATCATCTTTCCTGGAGAATCGCTCACGCACAACCCCT
TCCTGAACGTCGACTGGAAAGCAGTGTTGCAGCGTTTATTGCTCCCTCGTGGGATTTGTGCATT
ACAGCCCGTGTACAAAGAATTTTCGAGCAAGGATACACACATTGTTTTTCCAGGCGGTGTGTCT
GCTACAATCGCAGAGCCTAAGACTCCATCACTTCTGAAAGAGTTCAGTCTTCAAAGTGCCGTTT
CCGTGACTGCCAACATTTAGATGGATGCTGATAAATGACTGCTGGCAAATGCTGATGCAGACTC
GGTCTGCGGTGACGCCAGCTCTCCCCACTGACCCACAGACAGCCATGAGCTTTAGACAGTTAGG
ACATAGGCTTCCATGTTTTGTTCCTGTTTTGTTTGGAGTCCCGCAGACTTCATCTAAAATGCAG
AGAAGAGTTAAGGGCTTGGAATAGTAAATAAAGTCCTGAAGGAGTTC

hide sequence

Protein Sequences


Protein RefSeqs	XP_001924846	(Get FASTA)	NCBI Sequence Viewer
	XP_013852996	(Get FASTA)	NCBI Sequence Viewer
	XP_013852997	(Get FASTA)	NCBI Sequence Viewer
	XP_020947194	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000028669.4
	ENSSSCP00000029266.2
	ENSSSCP00000067203.2
	ENSSSCP00000069815.2
	ENSSSCP00000069842.2
	ENSSSCP00000070143
	ENSSSCP00000070143.2
	ENSSSCP00000072784.1
	ENSSSCP00000073420.1
	ENSSSCP00000074298
	ENSSSCP00000074298.1
	ENSSSCP00000076891.1
	ENSSSCP00015038944.1
	ENSSSCP00015039013.1
	ENSSSCP00025011672.1
	ENSSSCP00030004157.1
	ENSSSCP00035038137.1
	ENSSSCP00045037057.1
	ENSSSCP00045037358.1
	ENSSSCP00050044236.1
	ENSSSCP00055048712.1
	ENSSSCP00055048723.1
GenBank Protein	JAG69345	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_020947194 ⟸ XM_021091535
- Peptide Label:	isoform X4
- UniProtKB:	A0A480PII7 (UniProtKB/TrEMBL), A0A8D0PUC5 (UniProtKB/TrEMBL), A0A480PH34 (UniProtKB/TrEMBL), A0A8D0R4P9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDQPLDPEGGDFAQLPDDIAVSANIADIEEKRGFTSHFVFVIEVKTKGGCKYLIYRRYRQFYAL QSKLEERFGPESKTSPFTCVLPTLPAKVYVGVKQEIAEMRIPALNAYMKNLLSLPICVLMDEDV RIFFYQSSYDAEQVPQGLRRLRPRTRKVKSESPQGASLDRMAAPRAEALFDFTGNSKLELNFKV GDVIFLLSRINKDWLEGTLRGTTGIFPASFVKILKDFPEEEDPTNWLRCCFYEDSVSTTKDIAV EEDLTSTPLYKDLLELVRREFQREDLALNYRDAEGDLVRLLSDEDVQLMVRQAQGLPSQKRLFP WKLHITQKDNYKVYNTVP hide sequence

RefSeq Acc Id:	XP_013852997 ⟸ XM_013997543
- Peptide Label:	isoform X2
- UniProtKB:	A0A480PH34 (UniProtKB/TrEMBL), A0A8D0R4P9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDQPLDPEGGDFAQLPDDIAVSANIADIEEKRGFTSHFVFVIEVKTKGGCKYLIYRRYRQFYAL QSKLEERFGPESKTSPFTCVLPTLPAKVYVGVKQEIAEMRIPALNAYMKNLLSLPICVLMDEDV RIFFYQSSYDAEQVPQGLRRLRPRTRKVKSESPQGASLDRMAAPRAEALFDFTGNSKLELNFKV GDVIFLLSRINKDWLEVRLEGTLRGTTGIFPASFVKILKDFPEEEDPTNWLRCCFYEDSVSTTK DIAVEEDLTSTPLYKDLLELVRREFQREDLALNYRDAEGDLVRLLSDEDVQLMVRQAQGLPSQK RLFPWKLHITQKDNYKVYNTVP hide sequence

RefSeq Acc Id:	XP_001924846 ⟸ XM_001924811
- Peptide Label:	isoform X3
- UniProtKB:	A0A480XKX3 (UniProtKB/TrEMBL), A0A8D0VCR6 (UniProtKB/TrEMBL), A0A0B8RTF7 (UniProtKB/TrEMBL), A0A8D1UEW7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAMAVAQQLRAESDFAQLPDDIAVSANIADIEEKRGFTSHFVFVIEVKTKGGCKYLIYRRYRQF YALQSKLEERFGPESKTSPFTCVLPTLPAKVYVGVKQEIAEMRIPALNAYMKNLLSLPICVLMD EDVRIFFYQSSYDAEQVPQGLRRLRPRTRKVKSESPQGASLDRMAAPRAEALFDFTGNSKLELN FKVGDVIFLLSRINKDWLEGTLRGTTGIFPASFVKILKDFPEEEDPTNWLRCCFYEDSVSTTKD IAVEEDLTSTPLYKDLLELVRREFQREDLALNYRDAEGDLVRLLSDEDVQLMVRQAQGLPSQKR LFPWKLHITQKDNYKVYNTVP hide sequence

RefSeq Acc Id:	XP_013852996 ⟸ XM_013997542
- Peptide Label:	isoform X1
- UniProtKB:	A0A0B8RTF7 (UniProtKB/TrEMBL), A0A8D1UEW7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAMAVAQQLRAESDFAQLPDDIAVSANIADIEEKRGFTSHFVFVIEVKTKGGCKYLIYRRYRQF YALQSKLEERFGPESKTSPFTCVLPTLPAKVYVGVKQEIAEMRIPALNAYMKNLLSLPICVLMD EDVRIFFYQSSYDAEQVPQGLRRLRPRTRKVKSESPQGASLDRMAAPRAEALFDFTGNSKLELN FKVGDVIFLLSRINKDWLEVRLEGTLRGTTGIFPASFVKILKDFPEEEDPTNWLRCCFYEDSVS TTKDIAVEEDLTSTPLYKDLLELVRREFQREDLALNYRDAEGDLVRLLSDEDVQLMVRQAQGLP SQKRLFPWKLHITQKDNYKVYNTVP hide sequence

Ensembl Acc Id:

ENSSSCP00000072784 ⟸ ENSSSCT00000083107

Ensembl Acc Id:

ENSSSCP00000029266 ⟸ ENSSSCT00000034941

Ensembl Acc Id:

ENSSSCP00000069815 ⟸ ENSSSCT00000089031

Ensembl Acc Id:

ENSSSCP00000067203 ⟸ ENSSSCT00000075176

Ensembl Acc Id:

ENSSSCP00000074298 ⟸ ENSSSCT00000075411

Ensembl Acc Id:

ENSSSCP00000028669 ⟸ ENSSSCT00000036476

Ensembl Acc Id:

ENSSSCP00000069842 ⟸ ENSSSCT00000071185

Ensembl Acc Id:

ENSSSCP00000070143 ⟸ ENSSSCT00000081184

Ensembl Acc Id:

ENSSSCP00000073420 ⟸ ENSSSCT00000087050

Ensembl Acc Id:

ENSSSCP00000076891 ⟸ ENSSSCT00000105262

Protein Domains

PB1 PX SH3

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000000137	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015070074	UniProtKB/TrEMBL
	ENSSSCG00025020281	UniProtKB/TrEMBL
	ENSSSCG00030007246	UniProtKB/TrEMBL
	ENSSSCG00035067295	UniProtKB/TrEMBL
	ENSSSCG00045030979	UniProtKB/TrEMBL
	ENSSSCG00050074234	UniProtKB/TrEMBL
	ENSSSCG00055030505	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000034941.4	UniProtKB/TrEMBL
	ENSSSCT00000036476.4	UniProtKB/TrEMBL
	ENSSSCT00000071185.2	UniProtKB/TrEMBL
	ENSSSCT00000075176.2	UniProtKB/TrEMBL
	ENSSSCT00000075411	ENTREZGENE
	ENSSSCT00000075411.1	UniProtKB/TrEMBL
	ENSSSCT00000081184	ENTREZGENE
	ENSSSCT00000081184.2	UniProtKB/TrEMBL
	ENSSSCT00000083107.1	UniProtKB/TrEMBL
	ENSSSCT00000087050.2	UniProtKB/TrEMBL
	ENSSSCT00000089031.2	UniProtKB/TrEMBL
	ENSSSCT00000105262.1	UniProtKB/TrEMBL
	ENSSSCT00015094911.1	UniProtKB/TrEMBL
	ENSSSCT00015095050.1	UniProtKB/TrEMBL
	ENSSSCT00025027572.1	UniProtKB/TrEMBL
	ENSSSCT00030009748.1	UniProtKB/TrEMBL
	ENSSSCT00035090977.1	UniProtKB/TrEMBL
	ENSSSCT00045053271.1	UniProtKB/TrEMBL
	ENSSSCT00045053715.1	UniProtKB/TrEMBL
	ENSSSCT00050101632.1	UniProtKB/TrEMBL
	ENSSSCT00055060788.1	UniProtKB/TrEMBL
	ENSSSCT00055060799.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.1520.10	UniProtKB/TrEMBL
	SH3 Domains	UniProtKB/TrEMBL
InterPro	NADPH_Oxidase/PX-Domain	UniProtKB/TrEMBL
	p40phox	UniProtKB/TrEMBL
	p40phox_SH3	UniProtKB/TrEMBL
	PB1-like	UniProtKB/TrEMBL
	PB1_dom	UniProtKB/TrEMBL
	PB1_P40	UniProtKB/TrEMBL
	Phox	UniProtKB/TrEMBL
	PX_dom_sf	UniProtKB/TrEMBL
	PX_p40phox	UniProtKB/TrEMBL
	SH3-like_dom_sf	UniProtKB/TrEMBL
	SH3_domain	UniProtKB/TrEMBL
KEGG Report	ssc:100152055	UniProtKB/TrEMBL
NCBI Gene	NCF4	ENTREZGENE
PANTHER	PTHR15706:SF20	UniProtKB/TrEMBL
	SH3 MULTIPLE DOMAIN	UniProtKB/TrEMBL
Pfam	PB1	UniProtKB/TrEMBL
	PF00787	UniProtKB/TrEMBL
	SH3_1	UniProtKB/TrEMBL
	SH3_9	UniProtKB/TrEMBL
PRINTS	P40PHOX	UniProtKB/TrEMBL
PROSITE	PB1	UniProtKB/TrEMBL
	PS50195	UniProtKB/TrEMBL
	SH3	UniProtKB/TrEMBL
SMART	PB1	UniProtKB/TrEMBL
	SH3	UniProtKB/TrEMBL
	SM00312	UniProtKB/TrEMBL
Superfamily-SCOP	CAD & PB1 domains	UniProtKB/TrEMBL
	SSF50044	UniProtKB/TrEMBL
	SSF64268	UniProtKB/TrEMBL
UniProt	A0A0B8RTF7	ENTREZGENE
	A0A480PH34	ENTREZGENE, UniProtKB/TrEMBL
	A0A480PII7	ENTREZGENE, UniProtKB/TrEMBL
	A0A480XKX3	ENTREZGENE, UniProtKB/TrEMBL
	A0A5G2QZ33_PIG	UniProtKB/TrEMBL
	A0A5G2QZ35_PIG	UniProtKB/TrEMBL
	A0A5G2R098_PIG	UniProtKB/TrEMBL
	A0A5G2R6T6_PIG	UniProtKB/TrEMBL
	A0A5G2R8Y4_PIG	UniProtKB/TrEMBL
	A0A5G2RAR0_PIG	UniProtKB/TrEMBL
	A0A8D0PUC5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0R4P9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0VCR6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1UEW7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8W4FF05_PIG	UniProtKB/TrEMBL
	K7GLE0_PIG	UniProtKB/TrEMBL
	K7GN17_PIG	UniProtKB/TrEMBL
VGNC ID	VGNC:90608	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM