GPR149 (G protein-coupled receptor 149) - Rat Genome Database

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Gene: GPR149 (G protein-coupled receptor 149) Sus scrofa
Analyze
Symbol: GPR149
Name: G protein-coupled receptor 149
RGD ID: 14143704
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); INVOLVED IN antral ovarian follicle growth (ortholog); negative regulation of ovulation (ortholog); preantral ovarian follicle growth (ortholog); ASSOCIATED WITH hypertrophic cardiomyopathy (ortholog); FOUND IN membrane (inferred)
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: probable G-protein coupled receptor 149
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1394,356,434 - 94,419,184 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11394,356,371 - 94,419,917 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213102,497,964 - 102,524,933 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
GPR149
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1394,356,434 - 94,419,184 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11394,356,371 - 94,419,917 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213102,497,964 - 102,524,933 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GPR149
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383154,334,943 - 154,430,190 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3154,334,943 - 154,430,190 (-)EnsemblGRCh38hg38GRCh38
GRCh373154,052,732 - 154,147,979 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363155,538,155 - 155,630,198 (-)NCBINCBI36Build 36hg18NCBI36
Celera3152,476,120 - 152,567,869 (-)NCBICelera
Cytogenetic Map3q25.2NCBI
HuRef3151,450,408 - 151,542,196 (-)NCBIHuRef
CHM1_13154,018,600 - 154,110,520 (-)NCBICHM1_1
T2T-CHM13v2.03157,109,201 - 157,204,151 (-)NCBIT2T-CHM13v2.0
Gpr149
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39362,436,851 - 62,512,861 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl362,436,498 - 62,512,561 (-)EnsemblGRCm39 Ensembl
GRCm38362,529,430 - 62,605,440 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl362,529,077 - 62,605,140 (-)EnsemblGRCm38mm10GRCm38
MGSCv37362,333,885 - 62,409,062 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36362,617,892 - 62,693,069 (-)NCBIMGSCv36mm8
Celera362,201,246 - 62,278,479 (-)NCBICelera
Cytogenetic Map3E1NCBI
cM Map329.97NCBI
Gpr149
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82149,059,333 - 149,130,798 (-)NCBIGRCr8
mRatBN7.22146,909,710 - 146,981,924 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2146,909,713 - 146,981,167 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2153,589,486 - 153,651,712 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02151,691,340 - 151,752,751 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02146,323,718 - 146,385,139 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02152,838,836 - 152,912,027 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2152,839,117 - 152,911,553 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02172,297,848 - 172,307,498 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.02172,232,553 - 172,234,225 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42152,176,361 - 152,257,898 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12152,126,326 - 152,207,861 (-)NCBI
Celera2141,248,693 - 141,308,009 (-)NCBICelera
Cytogenetic Map2q31NCBI
Gpr149
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554485,685,168 - 5,749,467 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554485,682,132 - 5,749,533 (-)NCBIChiLan1.0ChiLan1.0
GPR149
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22152,251,687 - 152,352,510 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13152,256,419 - 152,357,242 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03151,393,049 - 151,493,824 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13158,946,398 - 159,045,996 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3158,949,110 - 159,046,551 (-)Ensemblpanpan1.1panPan2
GPR149
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12348,470,428 - 48,535,861 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2348,471,701 - 48,535,195 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2348,336,897 - 48,402,512 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02349,100,098 - 49,165,816 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2349,101,331 - 49,165,830 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12348,680,893 - 48,746,295 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02348,736,831 - 48,802,227 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02349,019,460 - 49,085,316 (-)NCBIUU_Cfam_GSD_1.0
Gpr149
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560287,663,724 - 87,740,772 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365191,998,086 - 2,070,481 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365191,997,492 - 2,070,157 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GPR149
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11536,286,777 - 36,376,765 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1536,287,701 - 36,374,008 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660418,946,424 - 9,039,320 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gpr149
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473031,921,426 - 31,998,801 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473031,921,433 - 31,999,075 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in GPR149
1222 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
ectoderm
endocrine system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
2 21 3 2 1 21 1 4

Sequence


Ensembl Acc Id: ENSSSCT00000036711   ⟹   ENSSSCP00000042052
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1394,356,434 - 94,419,184 (-)Ensembl
RefSeq Acc Id: NM_001204774   ⟹   NP_001191703
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11394,357,435 - 94,418,619 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021068449   ⟹   XP_020924108
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11394,356,371 - 94,419,917 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001191703 (Get FASTA)   NCBI Sequence Viewer  
  XP_020924108 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein ADK92411 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000042052
  ENSSSCP00000042052.1
  ENSSSCP00015018118.1
  ENSSSCP00035002715.1
  ENSSSCP00040012057.1
  ENSSSCP00070005010.1
RefSeq Acc Id: XP_020924108   ⟸   XM_021068449
- Peptide Label: isoform X1
- UniProtKB: A0A287ADY5 (UniProtKB/TrEMBL),   A0A8D0YM09 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001191703   ⟸   NM_001204774
- UniProtKB: E7CHE9 (UniProtKB/TrEMBL),   A0A287ADY5 (UniProtKB/TrEMBL),   A0A8D0YM09 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000042052   ⟸   ENSSSCT00000036711


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000023582 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015034464 UniProtKB/TrEMBL
  ENSSSCG00035006385 UniProtKB/TrEMBL
  ENSSSCG00040021365 UniProtKB/TrEMBL
  ENSSSCG00070003242 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000036711 ENTREZGENE
  ENSSSCT00000036711.3 UniProtKB/TrEMBL
  ENSSSCT00015045754.1 UniProtKB/TrEMBL
  ENSSSCT00035007952.1 UniProtKB/TrEMBL
  ENSSSCT00040028730.1 UniProtKB/TrEMBL
  ENSSSCT00070006135.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
KEGG Report ssc:100533550 UniProtKB/TrEMBL
NCBI Gene GPR149 ENTREZGENE
PANTHER G-PROTEIN COUPLED RECEPTOR 149-RELATED UniProtKB/TrEMBL
  NEUROPEPTIDES RECEPTOR UniProtKB/TrEMBL
UniProt A0A287ADY5 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1SRI8_PIG UniProtKB/TrEMBL
  A0A8D0YM09 ENTREZGENE, UniProtKB/TrEMBL
  E7CHE9 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:88605 ENTREZGENE