RSU1 (Ras suppressor protein 1) - Rat Genome Database

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Gene: RSU1 (Ras suppressor protein 1) Sus scrofa
Analyze
Symbol: RSU1
Name: Ras suppressor protein 1
RGD ID: 14133143
Description: INVOLVED IN neural precursor cell proliferation (ortholog); positive regulation of neural precursor cell proliferation (ortholog); Ras protein signal transduction (ortholog); ASSOCIATED WITH Chloracne (ortholog); genetic disease (ortholog); hypoparathyroidism-deafness-renal disease syndrome (ortholog); FOUND IN focal adhesion (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1045,079,007 - 45,289,422 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11045,079,014 - 45,492,073 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21049,812,898 - 49,996,912 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:14681463   PMID:15679890   PMID:17145712   PMID:22301074  


Genomics

Comparative Map Data
RSU1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1045,079,007 - 45,289,422 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11045,079,014 - 45,492,073 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21049,812,898 - 49,996,912 (+)NCBISscrofa10.2Sscrofa10.2susScr3
RSU1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381016,590,611 - 16,817,424 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1016,590,611 - 16,817,463 (-)EnsemblGRCh38hg38GRCh38
GRCh371016,632,610 - 16,859,423 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361016,672,621 - 16,899,459 (-)NCBINCBI36Build 36hg18NCBI36
Build 341016,672,622 - 16,899,459NCBI
Celera1016,565,823 - 16,792,666 (-)NCBICelera
Cytogenetic Map10p13NCBI
HuRef1016,545,647 - 16,773,246 (-)NCBIHuRef
CHM1_11016,632,861 - 16,859,640 (-)NCBICHM1_1
T2T-CHM13v2.01016,609,081 - 16,835,881 (-)NCBIT2T-CHM13v2.0
Rsu1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39213,081,778 - 13,276,116 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl213,081,632 - 13,276,226 (-)EnsemblGRCm39 Ensembl
GRCm38213,076,967 - 13,271,438 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl213,076,821 - 13,271,415 (-)EnsemblGRCm38mm10GRCm38
MGSCv37212,998,636 - 13,192,905 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36212,994,862 - 13,189,131 (-)NCBIMGSCv36mm8
Celera212,987,343 - 13,181,159 (-)NCBICelera
Cytogenetic Map2A1NCBI
cM Map29.73NCBI
Rsu1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81781,037,848 - 81,286,127 (-)NCBIGRCr8
mRatBN7.21776,128,774 - 76,377,515 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1776,188,812 - 76,377,454 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1779,654,121 - 79,850,100 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01783,489,506 - 83,685,483 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01777,537,425 - 77,733,391 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01780,388,477 - 80,577,338 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1780,389,157 - 80,577,027 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01782,009,674 - 82,197,926 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41787,345,488 - 87,538,289 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1775,557,867 - 75,746,355 (-)NCBICelera
Cytogenetic Map17q12.3NCBI
Rsu1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542911,043,040 - 11,235,758 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542911,043,205 - 11,234,698 (+)NCBIChiLan1.0ChiLan1.0
RSU1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2829,435,295 - 29,660,316 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11029,438,590 - 29,665,616 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01016,909,912 - 17,134,697 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11017,183,859 - 17,408,233 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1017,184,511 - 17,407,769 (-)Ensemblpanpan1.1panPan2
RSU1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1220,050,029 - 20,299,179 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl220,050,117 - 20,299,184 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha217,159,566 - 17,408,494 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0220,341,793 - 20,591,529 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl220,341,803 - 20,591,534 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1217,550,016 - 17,798,962 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0218,382,675 - 18,631,913 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0219,008,189 - 19,257,447 (+)NCBIUU_Cfam_GSD_1.0
Rsu1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934417,355,825 - 17,540,972 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493652010,419,395 - 10,604,762 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493652010,419,405 - 10,602,820 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RSU1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1916,539,230 - 16,768,526 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl916,535,573 - 16,768,593 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605122,171,431 - 22,402,493 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rsu1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462479610,994,062 - 11,183,562 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462479610,994,043 - 11,183,091 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in RSU1
18227 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 10 4 1 5 2 7 2 3 3
Low 2 16
Below cutoff

Sequence


RefSeq Acc Id: ENSSSCT00000012086   ⟹   ENSSSCP00000011778
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1045,079,047 - 45,289,422 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000080977   ⟹   ENSSSCP00000060502
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1045,079,165 - 45,196,558 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000105169   ⟹   ENSSSCP00000074764
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1045,079,007 - 45,191,465 (+)Ensembl
RefSeq Acc Id: XM_021064827   ⟹   XP_020920486
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11045,079,014 - 45,289,423 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021064828   ⟹   XP_020920487
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11045,079,071 - 45,289,423 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021064829   ⟹   XP_020920488
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11045,079,014 - 45,272,196 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002336347
Type: NON-CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11045,079,014 - 45,492,073 (+)NCBI
Sequence:
RefSeq Acc Id: XP_020920486   ⟸   XM_021064827
- Peptide Label: isoform X1
- UniProtKB: A0A4X1U9D1 (UniProtKB/TrEMBL),   F1RW98 (UniProtKB/TrEMBL),   A0A8D0U1K2 (UniProtKB/TrEMBL),   A0A8D1JNB4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020920488   ⟸   XM_021064829
- Peptide Label: isoform X3
- UniProtKB: A0A8D1A671 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020920487   ⟸   XM_021064828
- Peptide Label: isoform X2
- UniProtKB: A0A8D0U1K2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000060502   ⟸   ENSSSCT00000080977
RefSeq Acc Id: ENSSSCP00000011778   ⟸   ENSSSCT00000012086
RefSeq Acc Id: ENSSSCP00000074764   ⟸   ENSSSCT00000105169


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000011042 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005044335 UniProtKB/TrEMBL
  ENSSSCG00015034558 UniProtKB/TrEMBL
  ENSSSCG00025030381 UniProtKB/TrEMBL
  ENSSSCG00035050070 UniProtKB/TrEMBL
  ENSSSCG00040064345 UniProtKB/TrEMBL
  ENSSSCG00045014890 UniProtKB/TrEMBL
  ENSSSCG00050001854 UniProtKB/TrEMBL
  ENSSSCG00060017846 UniProtKB/TrEMBL
  ENSSSCG00065034679 UniProtKB/TrEMBL
  ENSSSCG00070015114 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000012086 ENTREZGENE
  ENSSSCT00000012086.4 UniProtKB/TrEMBL
  ENSSSCT00000080977.1 UniProtKB/TrEMBL
  ENSSSCT00000105169 ENTREZGENE
  ENSSSCT00000105169.1 UniProtKB/TrEMBL
  ENSSSCT00005071332.1 UniProtKB/TrEMBL
  ENSSSCT00015046476.1 UniProtKB/TrEMBL
  ENSSSCT00015046821.1 UniProtKB/TrEMBL
  ENSSSCT00025041290.1 UniProtKB/TrEMBL
  ENSSSCT00035066716.1 UniProtKB/TrEMBL
  ENSSSCT00035066728.1 UniProtKB/TrEMBL
  ENSSSCT00040087855.1 UniProtKB/TrEMBL
  ENSSSCT00040087964.1 UniProtKB/TrEMBL
  ENSSSCT00045025276.1 UniProtKB/TrEMBL
  ENSSSCT00050002275.1 UniProtKB/TrEMBL
  ENSSSCT00060023906.1 UniProtKB/TrEMBL
  ENSSSCT00065047202.1 UniProtKB/TrEMBL
  ENSSSCT00070029700.1 UniProtKB/TrEMBL
Gene3D-CATH 3.80.10.10 UniProtKB/TrEMBL
InterPro Leu-rich_rpt UniProtKB/TrEMBL
  Leu-rich_rpt_4 UniProtKB/TrEMBL
  Leu-rich_rpt_typical-subtyp UniProtKB/TrEMBL
  LRR_dom_sf UniProtKB/TrEMBL
NCBI Gene RSU1 ENTREZGENE
PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 UniProtKB/TrEMBL
  PTHR48051 UniProtKB/TrEMBL
Pfam LRR_1 UniProtKB/TrEMBL
  LRR_4 UniProtKB/TrEMBL
  LRR_8 UniProtKB/TrEMBL
PROSITE LRR UniProtKB/TrEMBL
SMART LRR_BAC UniProtKB/TrEMBL
  LRR_TYP UniProtKB/TrEMBL
Superfamily-SCOP L domain-like UniProtKB/TrEMBL
UniProt A0A4X1U9D1 ENTREZGENE
  A0A5G2Q990_PIG UniProtKB/TrEMBL
  A0A8D0U1K2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1A671 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1FS79_PIG UniProtKB/TrEMBL
  A0A8D1JNB4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8W4F6H9_PIG UniProtKB/TrEMBL
  F1RW98 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A4X1U9D1 UniProtKB/TrEMBL
VGNC ID VGNC:98298 ENTREZGENE