OVOL1 (ovo like transcriptional repressor 1)

Gene: OVOL1 (ovo like transcriptional repressor 1) Sus scrofa

Analyze

Symbol:

OVOL1

Name:

ovo like transcriptional repressor 1

RGD ID:

14132593

Description:

ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (inferred); DNA-binding transcription repressor activity, RNA polymerase II-specific (inferred); metal ion binding (inferred); INVOLVED IN epidermis development (ortholog); germline cell cycle switching, mitotic to meiotic cell cycle (ortholog); keratinocyte proliferation (ortholog); ASSOCIATED WITH Aicardi-Goutieres Syndrome 3 (ortholog); atopic dermatitis (ortholog); Bardet-Biedl syndrome (ortholog); FOUND IN nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ovo-like 1(Drosophila); putative transcription factor Ovo-like 1

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	6,526,671 - 6,538,921 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	6,526,679 - 6,538,992 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	5,630,709 - 5,642,659 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Aicardi-Goutieres Syndrome 3 (ISO)

atopic dermatitis (ISO)

Bardet-Biedl syndrome (ISO)

genetic disease (ISO)

glycogen storage disease V (ISO)

intellectual disability (ISO)

pilomatrixoma (ISO)

Recurrent Infections, with Encephalopathy, Hepatic Dysfunction, and Cardiovascular Malformations (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

epidermal cell differentiation (IEA)

epidermis development (IEA,ISO)

germline cell cycle switching, mitotic to meiotic cell cycle (IEA,ISO)

keratinocyte proliferation (IEA,ISO)

kidney development (IEA,ISO)

meiotic cell cycle phase transition (IEA,ISO)

mesoderm development (IEA,ISO)

negative regulation of keratinocyte proliferation (IEA,ISO)

negative regulation of meiotic cell cycle phase transition (IEA,ISO)

negative regulation of stem cell proliferation (IEA,ISO)

negative regulation of transcription by RNA polymerase II (IEA,ISO)

regulation of transcription by RNA polymerase II (IEA)

skin development (IEA,ISO)

spermatogenesis (IEA,ISO)

stem cell proliferation (IEA,ISO)

Cellular Component

nucleus (IEA)

Molecular Function

DNA-binding transcription factor activity, RNA polymerase II-specific (IEA)

DNA-binding transcription repressor activity, RNA polymerase II-specific (IEA)

metal ion binding (IEA)

protein binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IEA)

sequence-specific double-stranded DNA binding (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

OVOL1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	6,526,671 - 6,538,921 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	6,526,679 - 6,538,992 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	5,630,709 - 5,642,659 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

OVOL1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	65,787,063 - 65,797,214 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	65,787,063 - 65,797,214 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	65,554,534 - 65,564,685 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	65,311,105 - 65,321,261 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	11	65,311,104 - 65,321,259	NCBI
Celera	11	62,885,403 - 62,888,586 (+)	NCBI		Celera
Cytogenetic Map	11	q13.1	NCBI
HuRef	11	61,863,298 - 61,891,453 (+)	NCBI		HuRef
CHM1_1	11	65,438,395 - 65,448,582 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	65,781,531 - 65,791,682 (+)	NCBI		T2T-CHM13v2.0

Ovol1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	5,599,165 - 5,610,603 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	5,599,164 - 5,610,674 (-)	Ensembl		GRCm39 Ensembl
GRCm38	19	5,549,137 - 5,560,575 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	5,549,136 - 5,560,646 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	5,549,137 - 5,560,575 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	5,549,137 - 5,560,575 (-)	NCBI		MGSCv36	mm8
Celera	19	5,420,389 - 5,431,822 (-)	NCBI		Celera
Cytogenetic Map	19	A	NCBI
cM Map	19	4.34	NCBI

Ovol1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	212,284,601 - 212,296,106 (-)	NCBI		GRCr8
mRatBN7.2	1	202,855,261 - 202,868,858 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	202,855,265 - 202,866,831 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	211,207,585 - 211,219,080 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	218,300,676 - 218,312,178 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	210,991,722 - 211,003,223 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	220,927,309 - 220,938,814 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	220,925,605 - 220,938,814 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	227,857,053 - 227,870,531 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	208,192,952 - 208,204,453 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	208,348,281 - 208,359,704 (-)	NCBI
Celera	1	200,391,028 - 200,402,529 (-)	NCBI		Celera
Cytogenetic Map	1	q43	NCBI

Ovol1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	19,522,384 - 19,534,450 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955422	19,524,420 - 19,528,938 (-)	NCBI	ChiLan1.0	ChiLan1.0

OVOL1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	67,015,658 - 67,033,232 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	68,058,432 - 68,072,526 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	61,144,969 - 61,156,706 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	64,478,374 - 64,488,647 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	64,478,549 - 64,488,647 (+)	Ensembl	panpan1.1		panPan2

OVOL1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	51,454,170 - 51,465,189 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	51,455,107 - 51,464,847 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	50,061,870 - 50,073,650 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	52,491,190 - 52,502,975 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	52,491,939 - 52,503,126 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	51,591,003 - 51,602,783 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	51,165,636 - 51,177,417 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	51,954,801 - 51,966,586 (-)	NCBI		UU_Cfam_GSD_1.0

Ovol1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	7,289,360 - 7,300,392 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936599	3,731,083 - 3,742,770 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936599	3,732,335 - 3,742,749 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

OVOL1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	8,470,065 - 8,480,406 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	8,470,029 - 8,478,626 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	105,755,984 - 105,766,125 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ovol1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624767	20,622,733 - 20,636,067 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624767	20,624,325 - 20,636,015 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in OVOL1
273 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	nervous system	renal system	reproductive system	respiratory system
High
Medium	2
Low	7			1		2	2	1
Below cutoff	1	1	3		18		1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003122528	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021082825	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK351093	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU856129	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000024363 ⟹ ENSSSCP00000022132

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	6,526,671 - 6,538,921 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000040119 ⟹ ENSSSCP00000056524

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	6,526,668 - 6,538,921 (-)	Ensembl

RefSeq Acc Id:

XM_003122528 ⟹ XP_003122576

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	6,526,679 - 6,538,992 (-)	NCBI

Sequence:

show sequence

CCCTCCCCGCCCCAGCCACCAACACACACCGCCGCGAGCCAATAAAGCGTGAACCCGTCCGGCC
GGCTCGCACTTTAAGACTTCCCGAGGGCCGCGGAGGACGCCAGTCGCGCCGGGAGACGCTTACC
TGCCGCTTCCGTCGCCGCCCGGTGCACCTGGCTGCAAGGCAACCTCGTTCGGACGGAGGACCGC
GACAGCTCCGCGGAGTTGAAACGGGCGCGCGCCGTCCCAGGCACGTCCTCCCGGCGGAACGCGG
GACGCTTCGGCGACACCTTTCCCGACCTGCCCCCCCCTCCCCGCCGCCGCCGCCCGCCGCCGCC
AGCCCGGCCCGGGAAAGGTGGGACGGCTCCGGCTCTAGTTACGGAAGCGGCCGGTGCCCGGCGA
GGAAGGTTCAAAAATGCCCCGCGCGTTTCTGGTGAAGAAGCCGTGCGTCTCCACGTGCAAACGG
AACTGGAGCGAGCTCCCCGACGAGGAGCGTGGCGAGATCTACGTACCAGTCAGCCTGGGCTTCT
GCCCACCACAGCCCTACCACGAGCCGGAGCCATCGGTGGCCGAACCCCCTTCTTGCCCCCTGGC
ATTGGACATGAGCCTTCGGGACTCCAGCTATAGTGTGGCCCCTGGGCCCTGTGTGGTGGCCCAG
CTGCCCTCTGAAGGCACGAGCCGCCTGGCAGACCCGCAGAGCAGAGACCACGGCTTCTTGCGCA
CCAAGATGAAGGTGACCCTGGGGGACAGTCCCAGTGGAGACCTCTTCACCTGCCACATCTGCCA
GAAGGCCTTCACCTACCAGCGCATGCTGAATCGCCACATGAAGTGTCACAACGACGTCAAGAGG
CACCTCTGCACCTACTGCGGGAAGGGTTTCAATGACACCTTCGACCTGAAGAGACACGTACGCA
CCCACACAGGCGTGCGGCCCTACAAGTGCAGCCTGTGTGACAAGGCCTTCACGCAGCGCTGCTC
GCTGGAGTCTCATCTCAAGAAGATCCACGGCGTGCAGCAGAAGTACGCGTACAAGGAGCGGCGG
GCCAAGCTGTACGTGTGCGAGGAGTGTGGCTGCACGTCCGAGAGCCAGGAGGGCCACGTCTTGC
ACCTGAAGGAGCACCACCCCGACAGCCCGCTGCTGCGCAAGACCTCCAAGAAGGTGGCCGTGGC
CCTGCAGAACACCGTCACCTCCCTGCTGCAGGGCACCCACCACCTCTGAACGCGGGGCCCCAGC
CTGCGCAGGCCCGGGGGCGAAGGTCGCCTCCCTGCTGCGGCCACTTGCGGGACCCCGGCCATCA
GGACTGGAGCCCAGGCACGGTGCTCGCTCAGGCCCCACGCGGGCCCCCACCCGTGTTCGTATGT
GCGTCCAGCCCTGAGCCGGGGCTGACGTGTGTAAGAACAGGCCCGGTGAGGCCTTCCAATCCTT
GGATTCGAAGCAGCTCGCGGACCGACACAGGACTCCCTCCCCAAGGAGGTGCGCGAAGCCATCT
CGTTGTCTGCGGCCTCTGGAGCCCAGAGCCGGCTGCTGGTCCCCCGGGGACGGCGGGCAGGAGC
CCTGGCAAAGAGCTCCCCTGCAGACACAGTGGTGGAGGAGCTGGTGCTCAGGGCCGCGGCGGCC
CCGCTCATGGAGAGGCACGCGCGTGGGGGCATGGCCGTGGCGGCGAGCGTGCACACGGAGGCCT
GGCCACATATCACCTCATTTTTAAGAATCAATCACAAGGTGCCAAGGAGGTTTTATTTCCTTTT
TTAAAAGATGACAAATGTACAGATATTAATATATTTTTGGTGCCGATGGCAACTATTTTTAAGA
GAGGATGGAGCTGGCTTTTCTCCTCCCCACGCAGTTCTATTTATCCTGGACATTTCACCCCTCC
TCTGTGCCTTGGCGCTGGGGTGGCTGCCCTGACCCCACCCTTCATGCCTCCTGAAGGGTTTCAC
CTGACACTCTGCTCCAGCCCTGCCGCGGAGGGTGCACTGCTCCCTGTCCCCCTGCGGCCGGGAC
AGCGCGTCACATCTGTGGCTCTTCCCCCACCCCCACCGACTCTCCACCCTCCCACATCCTTTGA
AGGCAGGCCTCGGTGTCACCGAGAACTTCCTGGTCTCCCGATCGTGGACCTTTTGAGAAACAAC
TCACCCTTGGGGAGGCCGAGGTTCATCCATTGCGGCTGCGGGGCTGAGCCAGATGGGATGGTGT
GGCTTCCTCGTGCCCAGTGCCTGCAGTGCTAGGCATGCAGGGCCAGGCTGCAAGGCTTCCTCTT
TTCCTGGCTGAGTCAAAAATCCTAGGACAGGAGCAAAAAATTGGGACAGAATAAGAGCCAGACA
CATCAGAAGCCTTTAGAGGGAGAACAGTATTCGAGGGCTGACAAGTTATAGTTGGAGCCTTTCT
TCTGACTGATTTTCAAAGGGCCAGGCTGGGGCCTGGGCTCCTAAGGAGGGACCCACCCCTGAGC
CAGTCGGCTCCATCTTCGGGCCTCGGCCAGGCTCCCATGGCTTGGCTGGGTTTCCTGCTAAGAA
CAGAAAAGGGGGTGTGGGTCCAAAGAGAGCCAACCTGCCAAAGAGGGAGAAGGCAAACTTGAAA
GAGCCCACGGAACACGGCGGGTGGGGCTGCCCTGTGACGCCAAAGCCCAGGCAGAAGCGGCCTT
GGCCTCTCCTGCCCAAAAGGAACAGTGCACGCAGCTAAGGAGCCTGCTCGGCCCTCACTCTGTG
CCTGGTTGTTTTGGAAGACTCGTGTTTTATTTGATTCTAGACTGTGTGGGAGCTGCTGTATTCT
GGAAGTTGTAGAGGATAAAATAATATTATCTGGAAGCTCTGTCTTGTTTACATTCCTGCATCCC
TGTGTCTACTGCCTGGCTGAGGGAGTCACAAAGCTCTGTGTTGTCTGTTTTATTTTATAACTCC
CCCCCCAACTATCAAAATAAACGACCTATCGTTTTCTGTG

hide sequence

RefSeq Acc Id:

XM_021082825 ⟹ XP_020938484

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	6,526,680 - 6,536,968 (-)	NCBI

Sequence:

show sequence

GGCGACTAAAGCTCTGATTAAACCCCTGGGAACCTCCATACACTGTGGGAAGGGGCCCTAGAAA
AGGCAAAAAGACCAAAAAAAAAAAGTGAGCTGCCTCCTTACCGGAGGCAGAGCAGGGTGTAGGC
CCAGGACTCTGGTACAACTTCTTGCTTCTCTGAGCTCCCCGGCATTCCCCCTCCAGAAGGGCCA
GGCGAGGGGTGAGGGACCTCCCTCACCTGTTTGACTTGCTGCTTAGCTGCTCCTTGGGATCTGA
TAACCTGAACTTGGACTGTGCTAAAGTCAGCCTGGGCTTCTGCCCACCACAGCCCTACCACGAG
CCGGAGCCATCGGTGGCCGAACCCCCTTCTTGCCCCCTGGCATTGGACATGAGCCTTCGGGACT
CCAGCTATAGTGTGGCCCCTGGGCCCTGTGTGGTGGCCCAGCTGCCCTCTGAAGGCACGAGCCG
CCTGGCAGACCCGCAGAGCAGAGACCACGGCTTCTTGCGCACCAAGATGAAGGTGACCCTGGGG
GACAGTCCCAGTGGAGACCTCTTCACCTGCCACATCTGCCAGAAGGCCTTCACCTACCAGCGCA
TGCTGAATCGCCACATGAAGTGTCACAACGACGTCAAGAGGCACCTCTGCACCTACTGCGGGAA
GGGTTTCAATGACACCTTCGACCTGAAGAGACACGTACGCACCCACACAGGCGTGCGGCCCTAC
AAGTGCAGCCTGTGTGACAAGGCCTTCACGCAGCGCTGCTCGCTGGAGTCTCATCTCAAGAAGA
TCCACGGCGTGCAGCAGAAGTACGCGTACAAGGAGCGGCGGGCCAAGCTGTACGTGTGCGAGGA
GTGTGGCTGCACGTCCGAGAGCCAGGAGGGCCACGTCTTGCACCTGAAGGAGCACCACCCCGAC
AGCCCGCTGCTGCGCAAGACCTCCAAGAAGGTGGCCGTGGCCCTGCAGAACACCGTCACCTCCC
TGCTGCAGGGCACCCACCACCTCTGAACGCGGGGCCCCAGCCTGCGCAGGCCCGGGGGCGAAGG
TCGCCTCCCTGCTGCGGCCACTTGCGGGACCCCGGCCATCAGGACTGGAGCCCAGGCACGGTGC
TCGCTCAGGCCCCACGCGGGCCCCCACCCGTGTTCGTATGTGCGTCCAGCCCTGAGCCGGGGCT
GACGTGTGTAAGAACAGGCCCGGTGAGGCCTTCCAATCCTTGGATTCGAAGCAGCTCGCGGACC
GACACAGGACTCCCTCCCCAAGGAGGTGCGCGAAGCCATCTCGTTGTCTGCGGCCTCTGGAGCC
CAGAGCCGGCTGCTGGTCCCCCGGGGACGGCGGGCAGGAGCCCTGGCAAAGAGCTCCCCTGCAG
ACACAGTGGTGGAGGAGCTGGTGCTCAGGGCCGCGGCGGCCCCGCTCATGGAGAGGCACGCGCG
TGGGGGCATGGCCGTGGCGGCGAGCGTGCACACGGAGGCCTGGCCACATATCACCTCATTTTTA
AGAATCAATCACAAGGTGCCAAGGAGGTTTTATTTCCTTTTTTAAAAGATGACAAATGTACAGA
TATTAATATATTTTTGGTGCCGATGGCAACTATTTTTAAGAGAGGATGGAGCTGGCTTTTCTCC
TCCCCACGCAGTTCTATTTATCCTGGACATTTCACCCCTCCTCTGTGCCTTGGCGCTGGGGTGG
CTGCCCTGACCCCACCCTTCATGCCTCCTGAAGGGTTTCACCTGACACTCTGCTCCAGCCCTGC
CGCGGAGGGTGCACTGCTCCCTGTCCCCCTGCGGCCGGGACAGCGCGTCACATCTGTGGCTCTT
CCCCCACCCCCACCGACTCTCCACCCTCCCACATCCTTTGAAGGCAGGCCTCGGTGTCACCGAG
AACTTCCTGGTCTCCCGATCGTGGACCTTTTGAGAAACAACTCACCCTTGGGGAGGCCGAGGTT
CATCCATTGCGGCTGCGGGGCTGAGCCAGATGGGATGGTGTGGCTTCCTCGTGCCCAGTGCCTG
CAGTGCTAGGCATGCAGGGCCAGGCTGCAAGGCTTCCTCTTTTCCTGGCTGAGTCAAAAATCCT
AGGACAGGAGCAAAAAATTGGGACAGAATAAGAGCCAGACACATCAGAAGCCTTTAGAGGGAGA
ACAGTATTCGAGGGCTGACAAGTTATAGTTGGAGCCTTTCTTCTGACTGATTTTCAAAGGGCCA
GGCTGGGGCCTGGGCTCCTAAGGAGGGACCCACCCCTGAGCCAGTCGGCTCCATCTTCGGGCCT
CGGCCAGGCTCCCATGGCTTGGCTGGGTTTCCTGCTAAGAACAGAAAAGGGGGTGTGGGTCCAA
AGAGAGCCAACCTGCCAAAGAGGGAGAAGGCAAACTTGAAAGAGCCCACGGAACACGGCGGGTG
GGGCTGCCCTGTGACGCCAAAGCCCAGGCAGAAGCGGCCTTGGCCTCTCCTGCCCAAAAGGAAC
AGTGCACGCAGCTAAGGAGCCTGCTCGGCCCTCACTCTGTGCCTGGTTGTTTTGGAAGACTCGT
GTTTTATTTGATTCTAGACTGTGTGGGAGCTGCTGTATTCTGGAAGTTGTAGAGGATAAAATAA
TATTATCTGGAAGCTCTGTCTTGTTTACATTCCTGCATCCCTGTGTCTACTGCCTGGCTGAGGG
AGTCACAAAGCTCTGTGTTGTCTGTTTTATTTTATAACTCCCCCCCCAACTATCAAAATAAACG
ACCTATCGTTTTCTGT

hide sequence

Protein Sequences


Protein RefSeqs	XP_003122576	(Get FASTA)	NCBI Sequence Viewer
	XP_020938484	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000022132
	ENSSSCP00000022132.1
	ENSSSCP00005019368.1
	ENSSSCP00015032221.1
	ENSSSCP00025048059.1
	ENSSSCP00030011908.1
	ENSSSCP00035025640.1
	ENSSSCP00040039777.1
	ENSSSCP00045032047.1
	ENSSSCP00050013716.1
	ENSSSCP00055022380.1
	ENSSSCP00060040823.1
	ENSSSCP00065024660.1
	ENSSSCP00070028915.1
	ENSSSCP00070028956.1

RefSeq Acc Id:	XP_003122576 ⟸ XM_003122528
- Peptide Label:	isoform X1
- UniProtKB:	F1RU16 (UniProtKB/TrEMBL), A0A4X1UIC6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPRAFLVKKPCVSTCKRNWSELPDEERGEIYVPVSLGFCPPQPYHEPEPSVAEPPSCPLALDMS LRDSSYSVAPGPCVVAQLPSEGTSRLADPQSRDHGFLRTKMKVTLGDSPSGDLFTCHICQKAFT YQRMLNRHMKCHNDVKRHLCTYCGKGFNDTFDLKRHVRTHTGVRPYKCSLCDKAFTQRCSLESH LKKIHGVQQKYAYKERRAKLYVCEECGCTSESQEGHVLHLKEHHPDSPLLRKTSKKVAVALQNT VTSLLQGTHHL hide sequence

RefSeq Acc Id:	XP_020938484 ⟸ XM_021082825
- Peptide Label:	isoform X2
- UniProtKB:	A0A4X1UJY7 (UniProtKB/TrEMBL), A0A8D0PDC8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSLRDSSYSVAPGPCVVAQLPSEGTSRLADPQSRDHGFLRTKMKVTLGDSPSGDLFTCHICQKA FTYQRMLNRHMKCHNDVKRHLCTYCGKGFNDTFDLKRHVRTHTGVRPYKCSLCDKAFTQRCSLE SHLKKIHGVQQKYAYKERRAKLYVCEECGCTSESQEGHVLHLKEHHPDSPLLRKTSKKVAVALQ NTVTSLLQGTHHL hide sequence

RefSeq Acc Id:

ENSSSCP00000056524 ⟸ ENSSSCT00000040119

RefSeq Acc Id:

ENSSSCP00000022132 ⟸ ENSSSCT00000024363

Protein Domains

C2H2-type

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000027361	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00005020192	UniProtKB/TrEMBL
	ENSSSCG00015059734	UniProtKB/TrEMBL
	ENSSSCG00025076975	UniProtKB/TrEMBL
	ENSSSCG00030019286	UniProtKB/TrEMBL
	ENSSSCG00035047577	UniProtKB/TrEMBL
	ENSSSCG00040066231	UniProtKB/TrEMBL
	ENSSSCG00045027047	UniProtKB/TrEMBL
	ENSSSCG00050024416	UniProtKB/TrEMBL
	ENSSSCG00055014222	UniProtKB/TrEMBL
	ENSSSCG00060069152	UniProtKB/TrEMBL
	ENSSSCG00065041449	UniProtKB/TrEMBL
	ENSSSCG00070017506	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000024363	ENTREZGENE
	ENSSSCT00000024363.3	UniProtKB/TrEMBL
	ENSSSCT00005031791.1	UniProtKB/TrEMBL
	ENSSSCT00015079762.1	UniProtKB/TrEMBL
	ENSSSCT00025106828.1	UniProtKB/TrEMBL
	ENSSSCT00030026655.1	UniProtKB/TrEMBL
	ENSSSCT00035063354.1	UniProtKB/TrEMBL
	ENSSSCT00040090476.1	UniProtKB/TrEMBL
	ENSSSCT00045046181.1	UniProtKB/TrEMBL
	ENSSSCT00050032909.1	UniProtKB/TrEMBL
	ENSSSCT00055028086.1	UniProtKB/TrEMBL
	ENSSSCT00060094404.1	UniProtKB/TrEMBL
	ENSSSCT00065056705.1	UniProtKB/TrEMBL
	ENSSSCT00070034616.1	UniProtKB/TrEMBL
	ENSSSCT00070034665.1	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	Ovo-like	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
	Znf_C2H2_type	UniProtKB/TrEMBL
KEGG Report	ssc:100511364	UniProtKB/TrEMBL
NCBI Gene	OVOL1	ENTREZGENE
PANTHER	PTHR10032	UniProtKB/TrEMBL
	TRANSCRIPTION FACTOR OVO-LIKE 1-RELATED	UniProtKB/TrEMBL
Pfam	zf-C2H2	UniProtKB/TrEMBL
	zf-H2C2_2	UniProtKB/TrEMBL
PROSITE	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
SMART	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57667	UniProtKB/TrEMBL
UniProt	A0A4X1UIC6	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1UJY7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0PDC8	ENTREZGENE, UniProtKB/TrEMBL
	F1RU16	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:91111	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD