ZNF512B (zinc finger protein 512B) - Rat Genome Database
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Gene: ZNF512B (zinc finger protein 512B) Sus scrofa
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Symbol: ZNF512B
Name: zinc finger protein 512B
RGD ID: 14130941
Description: ENCODES a protein that exhibits ATP binding (inferred); uridine kinase activity (inferred); INVOLVED IN CTP salvage (inferred); nucleoside metabolic process (inferred); phosphorylation (inferred); FOUND IN nucleoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1762,785,419 - 62,807,552 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11762,796,583 - 62,807,340 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleoplasm  (IEA)

Molecular Function

References

Genomics

Comparative Map Data
ZNF512B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1762,785,419 - 62,807,552 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11762,796,583 - 62,807,340 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ZNF512B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2063,956,704 - 63,969,930 (-)EnsemblGRCh38hg38GRCh38
GRCh382063,956,703 - 63,969,930 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh372062,588,057 - 62,601,283 (-)NCBIGRCh37GRCh37hg19GRCh37
GRCh372062,588,057 - 62,601,223 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362062,058,499 - 62,071,662 (-)NCBINCBI36hg18NCBI36
Celera2059,274,689 - 59,287,852 (-)NCBI
Cytogenetic Map20q13.33NCBI
HuRef2059,323,362 - 59,334,614 (-)NCBIHuRef
CHM1_12062,488,483 - 62,499,735 (-)NCBICHM1_1
Zfp512b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392181,223,896 - 181,234,573 (-)NCBIGRCm39mm39
GRCm382181,582,103 - 181,592,972 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2181,582,103 - 181,592,803 (-)EnsemblGRCm38mm10GRCm38
MGSCv372181,316,808 - 181,327,166 (-)NCBIGRCm37mm9NCBIm37
MGSCv362181,511,510 - 181,525,355 (-)NCBImm8
Celera2185,663,702 - 185,674,066 (-)NCBICelera
Cytogenetic Map2H4NCBI
Zfp512b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.23168,687,520 - 168,698,067 (-)NCBI
Rnor_6.0 Ensembl3177,078,709 - 177,089,199 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.03177,078,708 - 177,089,210 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03180,788,170 - 180,798,662 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43170,720,978 - 170,731,468 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13170,629,755 - 170,640,659 (-)NCBI
Celera3163,889,580 - 163,900,058 (+)NCBICelera
Cytogenetic Map3q43NCBI
Znf512b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955528288,735 - 294,898 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955528288,494 - 297,850 (+)NCBIChiLan1.0ChiLan1.0
ZNF512B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12061,877,802 - 61,886,825 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2061,879,322 - 61,885,634 (-)Ensemblpanpan1.1panPan2
ZNF512B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2447,412,521 - 47,432,860 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12447,423,699 - 47,434,114 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Znf512b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_00493651411,156,602 - 11,166,404 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF512B
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12271,544 - 282,028 (+)NCBI
ChlSab1.1 Ensembl2272,027 - 282,197 (+)Ensembl
Znf512b
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474129,581,973 - 29,592,212 (-)NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium
Low 10 4 3 5 2 23 2 3 3
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: XM_021077615   ⟹   XP_020933274
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11762,796,583 - 62,806,809 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021077616   ⟹   XP_020933275
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11762,796,583 - 62,807,201 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021077617   ⟹   XP_020933276
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11762,796,583 - 62,806,809 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021077618   ⟹   XP_020933277
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11762,796,583 - 62,806,809 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021077619   ⟹   XP_020933278
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11762,796,583 - 62,806,809 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021077620   ⟹   XP_020933279
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11762,796,583 - 62,807,340 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021077621   ⟹   XP_020933280
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11762,796,583 - 62,807,201 (-)NCBI
Sequence:
RefSeq Acc Id: XM_021077622   ⟹   XP_020933281
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11762,796,583 - 62,807,340 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: XP_020933281   ⟸   XM_021077622
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_020933279   ⟸   XM_021077620
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_020933280   ⟸   XM_021077621
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_020933275   ⟸   XM_021077616
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_020933278   ⟸   XM_021077619
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_020933277   ⟸   XM_021077618
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_020933276   ⟸   XM_021077617
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_020933274   ⟸   XM_021077615
- Peptide Label: isoform X1
- Sequence:
Protein Domains
C2H2-type   PRK


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000035939 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSSSCP00000039048 UniProtKB/TrEMBL
  ENSSSCP00000041617 UniProtKB/TrEMBL
  ENSSSCP00000042948 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00000052566 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000048106 UniProtKB/TrEMBL
  ENSSSCT00000049102 UniProtKB/TrEMBL
  ENSSSCT00000051373 UniProtKB/TrEMBL
  ENSSSCT00000055309 ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.2020 UniProtKB/TrEMBL
InterPro P-loop_NTPase UniProtKB/TrEMBL
  PRibTrfase_dom UniProtKB/TrEMBL
  PRK/URK UniProtKB/TrEMBL
  PRTase-like UniProtKB/TrEMBL
  UCKL1 UniProtKB/TrEMBL
  Uridine_kinase-like UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
NCBI Gene ZNF512B ENTREZGENE
PANTHER PTHR10285:SF68 UniProtKB/TrEMBL
Pfam PRK UniProtKB/TrEMBL
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
  SSF53271 UniProtKB/TrEMBL
  SSF57667 UniProtKB/TrEMBL
TIGRFAMs udk UniProtKB/TrEMBL
UniProt A0A287A533_PIG UniProtKB/TrEMBL
  A0A287ACR2_PIG UniProtKB/TrEMBL
  A0A287AGH3_PIG UniProtKB/TrEMBL
  A0A287B8Z0_PIG UniProtKB/TrEMBL