LOC100525235 (olfactory receptor 11H6-like) - Rat Genome Database

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Pathways
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Gene: LOC100525235 (olfactory receptor 11H6-like) Sus scrofa
Analyze
Symbol: LOC100525235
Name: olfactory receptor 11H6-like
RGD ID: 14130452
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of smell (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1778,757,231 - 78,758,857 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.27133,843,963 - 133,844,908 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Variants

.
Variants in LOC100525235
77 total Variants

Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003128791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_003128791   ⟹   XP_003128839
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1778,757,231 - 78,758,857 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003128839 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00025004545.1
  ENSSSCP00035001350.1
  ENSSSCP00035030579.1
  ENSSSCP00055013844.1
  ENSSSCP00065038901.1
  ENSSSCP00070014937.1
Reference Protein Sequences
RefSeq Acc Id: XP_003128839   ⟸   XM_003128791
- UniProtKB: A0A8D0YER1 (UniProtKB/TrEMBL),   A0A4X1TIA2 (UniProtKB/TrEMBL),   A0A8D0QPA6 (UniProtKB/TrEMBL),   A0A8D1Q8P0 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00025008492 UniProtKB/TrEMBL
  ENSSSCG00035003245 UniProtKB/TrEMBL
  ENSSSCG00035056314 UniProtKB/TrEMBL
  ENSSSCG00055008956 UniProtKB/TrEMBL
  ENSSSCG00065064816 UniProtKB/TrEMBL
  ENSSSCG00070009274 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00025011304.1 UniProtKB/TrEMBL
  ENSSSCT00035004010.1 UniProtKB/TrEMBL
  ENSSSCT00035075186.1 UniProtKB/TrEMBL
  ENSSSCT00055017510.1 UniProtKB/TrEMBL
  ENSSSCT00065088957.1 UniProtKB/TrEMBL
  ENSSSCT00070017995.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
NCBI Gene LOC100525235 ENTREZGENE
PANTHER G-PROTEIN COUPLED RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR FAMILY 11 SUBFAMILY G MEMBER 9 UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A4X1TIA2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0QPA6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0YER1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1Q8P0 ENTREZGENE, UniProtKB/TrEMBL