C7H14orf93 (chromosome 7 C14orf93 homolog) - Rat Genome Database

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Gene: C7H14orf93 (chromosome 7 C14orf93 homolog) Sus scrofa
Analyze
Symbol: C7H14orf93 (Ensembl: C14orf93)
Name: chromosome 7 C14orf93 homolog
RGD ID: 14128265
Description: INVOLVED IN cell differentiation (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH Brain-Lung-Thyroid Syndrome (ortholog); lysinuric protein intolerance (ortholog); Specific Granule Deficiency (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: uncharacterized protein C14orf93 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl776,045,686 - 76,058,891 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1776,033,750 - 76,061,877 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

Genomics

Comparative Map Data
C7H14orf93
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl776,045,686 - 76,058,891 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1776,033,750 - 76,061,877 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
C14orf93
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381422,985,894 - 23,010,143 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1422,985,894 - 23,010,166 (-)EnsemblGRCh38hg38GRCh38
GRCh371423,455,103 - 23,479,352 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361422,525,951 - 22,549,192 (-)NCBINCBI36Build 36hg18NCBI36
Build 341422,525,950 - 22,549,192NCBI
Celera143,319,000 - 3,342,250 (-)NCBICelera
Cytogenetic Map14q11.2NCBI
HuRef143,573,344 - 3,596,639 (-)NCBIHuRef
CHM1_11423,454,741 - 23,477,990 (-)NCBICHM1_1
T2T-CHM13v2.01417,186,512 - 17,210,763 (-)NCBIT2T-CHM13v2.0
4931414P19Rik
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391454,821,119 - 54,843,450 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1454,821,120 - 54,843,450 (-)EnsemblGRCm39 Ensembl
GRCm381454,583,662 - 54,606,099 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1454,583,663 - 54,605,993 (-)EnsemblGRCm38mm10GRCm38
MGSCv371455,202,500 - 55,224,745 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361453,537,868 - 53,560,113 (-)NCBIMGSCv36mm8
Celera1452,372,626 - 52,394,656 (-)NCBICelera
Cytogenetic Map14C2NCBI
cM Map1427.85NCBI
C15h14orf93
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81532,007,591 - 32,034,337 (-)NCBIGRCr8
mRatBN7.21528,037,567 - 28,064,347 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1528,037,574 - 28,064,274 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1529,876,988 - 29,903,676 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01531,024,204 - 31,050,889 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01529,273,748 - 29,300,352 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01533,225,172 - 33,250,609 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1533,224,896 - 33,250,546 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01537,109,226 - 37,143,944 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41532,656,277 - 32,688,050 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1527,616,290 - 27,642,915 (-)NCBICelera
Cytogenetic Map15p13NCBI
CUNH14orf93
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540937,290,550 - 37,314,598 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540937,290,615 - 37,315,297 (+)NCBIChiLan1.0ChiLan1.0
C15H14orf93
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21524,419,703 - 24,431,943 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11423,636,188 - 23,648,298 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0143,807,076 - 3,830,892 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11421,905,028 - 21,928,242 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1421,905,028 - 21,928,242 (-)Ensemblpanpan1.1panPan2
C8H14orf93
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.183,305,532 - 3,316,072 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl83,305,751 - 3,316,079 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha83,253,297 - 3,264,153 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.083,413,133 - 3,423,991 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl83,413,664 - 3,437,322 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.183,104,064 - 3,114,923 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.083,165,789 - 3,176,644 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.083,427,852 - 3,438,706 (-)NCBIUU_Cfam_GSD_1.0
CUNH14orf93
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864035,060,954 - 35,084,717 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367221,316,789 - 1,328,059 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367221,304,357 - 1,327,726 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CUNH14orf93
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12923,356,885 - 23,381,273 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2923,355,798 - 23,369,839 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605923,038,445 - 23,063,808 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
CUNH14orf93
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248209,524,499 - 9,548,765 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248209,524,566 - 9,548,650 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in C7H14orf93
268 total Variants

Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSSSCT00000063573   ⟹   ENSSSCP00000042944
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl776,045,686 - 76,058,891 (+)Ensembl
RefSeq Acc Id: XM_021099247   ⟹   XP_020954906
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1776,033,750 - 76,061,877 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021099248   ⟹   XP_020954907
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1776,043,612 - 76,059,798 (+)NCBI
Sequence:
RefSeq Acc Id: XP_020954906   ⟸   XM_021099247
- UniProtKB: A0A286ZTB2 (UniProtKB/TrEMBL),   A0A4X1V3S7 (UniProtKB/TrEMBL),   A0A287AGG3 (UniProtKB/TrEMBL),   A0A8D2BNA2 (UniProtKB/TrEMBL),   A0A8D0I8E2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020954907   ⟸   XM_021099248
- UniProtKB: A0A286ZTB2 (UniProtKB/TrEMBL),   A0A4X1V3S7 (UniProtKB/TrEMBL),   A0A287AGG3 (UniProtKB/TrEMBL),   A0A8D2BNA2 (UniProtKB/TrEMBL),   A0A8D0I8E2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000042944   ⟸   ENSSSCT00000063573


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000031452 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005005549 UniProtKB/TrEMBL
  ENSSSCG00015056448 UniProtKB/TrEMBL
  ENSSSCG00025075985 UniProtKB/TrEMBL
  ENSSSCG00030067809 UniProtKB/TrEMBL
  ENSSSCG00035050978 UniProtKB/TrEMBL
  ENSSSCG00040028162 UniProtKB/TrEMBL
  ENSSSCG00045002903 UniProtKB/TrEMBL
  ENSSSCG00050040875 UniProtKB/TrEMBL
  ENSSSCG00055013712 UniProtKB/TrEMBL
  ENSSSCG00060054552 UniProtKB/TrEMBL
  ENSSSCG00065014615 UniProtKB/TrEMBL
  ENSSSCG00070021552 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000063573 ENTREZGENE
  ENSSSCT00000063573.3 UniProtKB/TrEMBL
  ENSSSCT00005008393.1 UniProtKB/TrEMBL
  ENSSSCT00015075472.1 UniProtKB/TrEMBL
  ENSSSCT00025105004.1 UniProtKB/TrEMBL
  ENSSSCT00030094825.1 UniProtKB/TrEMBL
  ENSSSCT00035067933.1 UniProtKB/TrEMBL
  ENSSSCT00040037812.1 UniProtKB/TrEMBL
  ENSSSCT00045004641.1 UniProtKB/TrEMBL
  ENSSSCT00050055380.1 UniProtKB/TrEMBL
  ENSSSCT00055027057.1 UniProtKB/TrEMBL
  ENSSSCT00060074304.1 UniProtKB/TrEMBL
  ENSSSCT00060074317.1 UniProtKB/TrEMBL
  ENSSSCT00065019477.1 UniProtKB/TrEMBL
  ENSSSCT00070042841.1 UniProtKB/TrEMBL
InterPro DUF4616 UniProtKB/TrEMBL
NCBI Gene C7H14orf93 ENTREZGENE
PANTHER PTHR14375 UniProtKB/TrEMBL
  SIMILAR TO RIKEN CDNA 4931414P19 UniProtKB/TrEMBL
Pfam DUF4616 UniProtKB/TrEMBL
UniProt A0A286ZTB2 ENTREZGENE
  A0A287AGG3 ENTREZGENE
  A0A4X1V3S7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0I8E2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D2BNA2 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A286ZTB2 UniProtKB/TrEMBL
  A0A287AGG3 UniProtKB/TrEMBL
VGNC ID VGNC:86069 ENTREZGENE