IMPG2 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 13 | 157,675,265 - 157,759,266 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 157,672,973 - 157,763,817 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 167,156,425 - 167,213,189 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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IMPG2 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 3 | 101,222,546 - 101,320,575 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 101,222,546 - 101,320,575 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 100,941,390 - 101,039,419 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 102,427,978 - 102,522,109 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 3 | 102,427,977 - 102,522,109 | NCBI | | | | | Celera | 3 | 99,336,927 - 99,431,029 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q12.3 | NCBI | | | | | HuRef | 3 | 98,310,078 - 98,408,005 (-) | NCBI | | HuRef | | | CHM1_1 | 3 | 100,904,435 - 101,002,378 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 103,928,482 - 104,026,449 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Impg2 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 16 | 56,019,447 - 56,094,119 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 16 | 56,024,676 - 56,094,119 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 16 | 56,203,839 - 56,273,753 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 16 | 56,204,313 - 56,273,756 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 16 | 56,204,426 - 56,273,866 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 16 | 56,129,264 - 56,198,704 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 16 | 56,513,770 - 56,586,681 (+) | NCBI | | Celera | | | Cytogenetic Map | 16 | C1.1 | NCBI | | | | | cM Map | 16 | 33.91 | NCBI | | | | |
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Impg2 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 11 | 57,787,914 - 57,887,450 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 11 | 44,318,836 - 44,418,382 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 11 | 44,318,836 - 44,418,382 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 11 | 53,102,588 - 53,195,399 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 11 | 45,764,196 - 45,857,013 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 11 | 44,888,351 - 44,981,173 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 11 | 46,615,091 - 46,693,565 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 11 | 46,615,200 - 46,693,565 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 11 | 49,797,496 - 49,875,529 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 11 | 45,267,158 - 45,385,026 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 11 | 45,324,746 - 45,442,615 (-) | NCBI | | | | | Celera | 11 | 44,082,608 - 44,170,046 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | q12 | NCBI | | | | |
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Impg2 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955427 | 2,826,457 - 2,919,282 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955427 | 2,825,940 - 2,919,282 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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IMPG2 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 2 | 99,175,172 - 99,265,863 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 99,179,956 - 99,270,644 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 98,325,379 - 98,418,344 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 105,005,029 - 105,098,122 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 105,005,553 - 105,097,902 (-) | Ensembl | panpan1.1 | | panPan2 | |
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IMPG2 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 33 | 7,706,069 - 7,785,817 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 33 | 7,709,683 - 7,785,309 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 33 | 7,857,507 - 7,940,480 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 33 | 7,842,019 - 7,924,899 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 33 | 7,848,570 - 7,924,188 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 33 | 7,730,507 - 7,813,125 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 33 | 7,776,490 - 7,858,926 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 33 | 8,116,576 - 8,198,496 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Impg2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405602 | 149,085,104 - 149,174,028 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936630 | 1,982,783 - 2,071,953 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936630 | 1,982,860 - 2,069,472 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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IMPG2 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 22 | 79,560,987 - 79,664,906 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 22 | 79,561,498 - 79,660,472 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666041 | 86,901,526 - 86,998,968 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Impg2 (Heterocephalus glaber - naked mole-rat) |
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