PYGM (glycogen phosphorylase, muscle associated)

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Gene: PYGM (glycogen phosphorylase, muscle associated) Sus scrofa

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Symbol:

PYGM

Name:

glycogen phosphorylase, muscle associated

RGD ID:

14125887

Description:

ENCODES a protein that exhibits AMP binding (ortholog); carbohydrate binding (ortholog); glycogen phosphorylase activity (ortholog); INVOLVED IN glycogen catabolic process (ortholog); glycogen metabolic process (ortholog); intracellular calcium ion homeostasis (ortholog); PARTICIPATES IN glycogen degradation pathway; ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); cholestasis (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN sarcoplasmic reticulum (ortholog); INTERACTS WITH deoxynivalenol; dobutamine

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

glycogen phosphorylase, muscle form; muscle (McArdle syndrome, glycogen storage disease type V); muscle glycogen phosphorylase; phosphorylase, glycogen; phosphorylase, glycogen, muscle

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	7,409,116 - 7,421,254 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	7,409,330 - 7,421,256 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	6,540,079 - 6,553,856 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Bardet-Biedl syndrome (ISO)

cholestasis (ISO)

Experimental Diabetes Mellitus (ISO)

genetic disease (ISO)

glycogen storage disease (ISO)

glycogen storage disease V (ISO)

high grade glioma (ISO)

High Myopia (ISO)

intellectual disability (ISO)

isolated elevated serum creatine phosphokinase levels (ISO)

Left Ventricular Hypertrophy (ISO)

leukocyte adhesion deficiency 3 (ISO)

multiple endocrine neoplasia type 1 (ISO)

muscular atrophy (ISO)

muscular disease (ISO)

Myocardial Ischemia (ISO)

myopathy (ISO)

Paralysis (ISO)

Rhabdomyolysis (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

deoxynivalenol (EXP)

dobutamine (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

carbohydrate metabolic process (IEA)

glycogen catabolic process (IEA,ISO)

glycogen metabolic process (IEA,ISO)

intracellular calcium ion homeostasis (ISO)

response to cAMP (ISO)

response to hypoxia (ISO)

Cellular Component

sarcoplasmic reticulum (ISO)

Molecular Function

1,4-alpha-oligoglucan phosphorylase activity (IEA)

AMP binding (ISO)

carbohydrate binding (ISO)

glycogen phosphorylase activity (IEA,ISO)

glycosyltransferase activity (IEA)

obsolete linear malto-oligosaccharide phosphorylase activity (IEA)

obsolete SHG alpha-glucan phosphorylase activity (IEA)

organic cyclic compound binding (ISO)

protein binding (ISO)

pyridoxal phosphate binding (IEA,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

glycogen degradation pathway (ISO)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:22023431	PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

PYGM
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	7,409,116 - 7,421,254 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	7,409,330 - 7,421,256 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	6,540,079 - 6,553,856 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PYGM
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	64,746,389 - 64,760,715 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	64,746,389 - 64,759,974 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	64,513,861 - 64,528,187 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	64,270,606 - 64,284,763 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	11	64,270,605 - 64,284,763	NCBI
Celera	11	61,840,305 - 61,854,685 (-)	NCBI		Celera
Cytogenetic Map	11	q13.1	NCBI
HuRef	11	60,840,630 - 60,855,032 (-)	NCBI		HuRef
CHM1_1	11	64,397,556 - 64,411,957 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	64,739,618 - 64,754,020 (-)	NCBI		T2T-CHM13v2.0

Pygm
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	6,434,438 - 6,448,494 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	6,434,429 - 6,448,489 (+)	Ensembl		GRCm39 Ensembl
GRCm38	19	6,384,408 - 6,398,464 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	6,384,399 - 6,398,459 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	6,384,429 - 6,398,459 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	6,384,429 - 6,398,459 (+)	NCBI		MGSCv36	mm8
Celera	19	6,257,446 - 6,271,476 (+)	NCBI		Celera
Cytogenetic Map	19	A	NCBI
cM Map	19	4.53	NCBI

Pygm
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	213,119,805 - 213,134,622 (+)	NCBI		GRCr8
mRatBN7.2	1	203,690,550 - 203,705,369 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	203,690,533 - 203,705,368 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	212,039,387 - 212,054,202 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	219,135,880 - 219,150,695 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	211,826,933 - 211,841,748 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	221,756,325 - 221,771,142 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	221,756,286 - 221,771,143 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	228,737,461 - 228,758,937 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	209,166,701 - 209,181,588 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	209,325,179 - 209,340,017 (+)	NCBI
Celera	1	201,223,967 - 201,238,784 (+)	NCBI		Celera
Cytogenetic Map	1	q43	NCBI

Pygm
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	20,411,480 - 20,424,931 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955422	20,411,480 - 20,424,676 (+)	NCBI	ChiLan1.0	ChiLan1.0

PYGM
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	65,972,186 - 65,987,376 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	67,015,183 - 67,028,876 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	60,101,810 - 60,115,813 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	63,443,609 - 63,457,012 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	63,443,609 - 63,457,430 (-)	Ensembl	panpan1.1		panPan2

PYGM
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	52,398,192 - 52,410,731 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	52,398,056 - 52,410,464 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	51,005,808 - 51,018,059 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	53,439,715 - 53,451,957 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	53,439,257 - 53,451,957 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	52,534,631 - 52,546,873 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	52,120,553 - 52,132,799 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	52,904,684 - 52,916,934 (+)	NCBI		UU_Cfam_GSD_1.0

Pygm
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	8,108,815 - 8,121,764 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936599	4,551,032 - 4,564,154 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936599	4,551,164 - 4,564,109 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PYGM
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	9,474,539 - 9,490,612 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	9,475,622 - 9,491,500 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	106,864,368 - 106,879,692 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pygm
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624767	21,626,740 - 21,640,161 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624767	21,626,740 - 21,639,963 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in PYGM
330 total Variants

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003122588	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ557228	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ557229	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK347221	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK347235	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK352444	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ508264	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ508265	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FP101995	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01034190	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000014234 ⟹ ENSSSCP00000013848

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	7,409,116 - 7,421,238 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000046089 ⟹ ENSSSCP00000053679

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	7,391,064 - 7,404,955 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000054386 ⟹ ENSSSCP00000032945

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	7,409,116 - 7,421,238 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000059278 ⟹ ENSSSCP00000051912

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	7,391,064 - 7,421,239 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000062161 ⟹ ENSSSCP00000049141

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	7,392,862 - 7,404,879 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000075431 ⟹ ENSSSCP00000068471

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	7,409,684 - 7,421,236 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000083511 ⟹ ENSSSCP00000069027

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	7,409,684 - 7,421,254 (+)	Ensembl

RefSeq Acc Id:

XM_003122588 ⟹ XP_003122636

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	7,409,330 - 7,421,256 (+)	NCBI

Sequence:

show sequence

AGGGCAGCCTCAGCCAAAGTTGGAGCCCAGCGGCTCCGGTCAAGGCTCAGGCCTCTCAGGCCAG
CCCGCCGCCGCCTGCTGCATCTTGTCTCTGACCCTGCAAAAGGCAGGGAGGGGGCCAGAGGGCA
GAAGGGCCGCCGTGTGCGAGGGGTGGGGGGGGACGTGGGTCCGCACAGGGCTGCCGGGCCCAGC
CCAGGCGGAGGTCCGGCCTGCTCTCCCTGCCCCTCTCTCCTCTCCTGCGCTTGCCCCAAAATAG
CTCCCGGAGCACCCAGGCCAAGACCCTCCCCCGGAGGGAGGAGGCGGGGCAAGCTGCCCAGAGC
CGGGCTTTAAATCGCCGGCCGGCCGGGGATCTCCACTCCCTGGCTGGAGGCACCGCTCAGGCCC
CCGTCCCCACCGTCCGTCCTTCCGTCCGGCCCGCCCTCCCGCAGCCATGTCCCGGCCCCTGACG
GACCAGGAGAAGAGAAAGCAGATCAGCGTGCGCGGCCTGGCCGGCGTGGAGAATGTGGCGGAGC
TGAAGAAGAACTTCAACCGGCACCTGCACTTCACCCTCGTGAAGGACCGCAACGTGGCCAACGC
CCGCGACTACTACTTCGCGCTGGCCTACACCGTGCGCGACCACCTCGTGGGCCGCTGGATCCGC
ACGCAGCAGCACTACTATGAGAAGGACCCTAAGAGGATCTATTACCTGTCTCTGGAATTCTACA
TGGGCCGGACGCTACAAAACACCATGGTGAACCTGGCCTTGGAAAATGCCTGTGATGAGGCCAC
CTACCAGCTGGGCTTGGACATGGAAGAGCTGGAGGAAATGGAGGAGGATGCCGGGCTCGGCAAT
GGGGGCCTGGGCCGGCTGGCAGCCTGCTTTCTGGACTCCATGGCAACACTGGGCCTGGCTGCCT
ATGGCTACGGGATCCGCTATGAGTTTGGGATTTTTAACCAGAAGATCACTGGGGGTTGGCAGAT
GGAGGAGGCTGATGACTGGCTTCGCTATGGCAACGCCTGGGAGAAGGCGCGACCCGAATTCACG
CTGCCTGTGCACTTCTATGGCCGAGTGGAGCACACCAACCAGGGGGCCAAGTGGGTGGACACAC
AGGTGGTGTTGGCCATGCCCTACGACACACCCGTGCCTGGCTACCGCAACAACGTCGTCAATAC
CATGCGCCTGTGGTCTGCCAAGGCCCCCAATGACTTCAACCTCAAAGACTTCAACGTCGGTGGC
TACATCCAGGCTGTGCTGGACCGCAACCTGGCTGAGAACATTTCTCGGGTCCTGTACCCCAATG
ACAATTTCTTTGAAGGGAAGGAGCTACGGTTGAAGCAGGAGTACTTCGTGGTGGCGGCCACGCT
CCAGGACATCATCCGCCGCTTCAAGTCCTCCAAGTTTGGCTGCCGTGACCCCGTGCGCACGAGC
TTCGACGCCTTCCCGGATAAGGTGGCCATCCAGCTCAATGACACCCACCCTTCTTTGGCCATCC
CTGAGCTGATGAGGATTCTGGTGGATGAGGAGCGGCTGGAGTGGGAGAAGGCATGGGACGTGAC
CGTGAGAACCTGTGCCTACACCAACCACACGGTGCTGCCAGAAGCCCTGGAGCGCTGGCCTGTG
CACCTCATGGAGACCCTGCTGCCCCGGCACCTCCAGATAATCTATGAGATCAACCAGCGCTTCC
TTAATCGCGTGGCGGCCGCGTACCCTGGGGATGTAGACCGGCTGCGGCGCATGTCTCTGGTGGA
GGAGGGCGCCGTGAAGCGCATCAACATGGCGCACCTGTGCATCGCCGGCTCGCACGCCGTCAAC
GGCGTGGCTCGCATCCACTCCGAGATCCTCAAGAAGACCATCTTCAAGGACTTCTACGAGCTGG
AGCCTCATAAGTTCCAGAATAAGACCAACGGCATCACCCCTCGGCGCTGGCTAGTTATGTGTAA
CCCTGGGCTGGCGGAGGTCATTGCTGAGCGCATCGGGGAGGAGTACATCGCAGACCTGGACCAG
CTGCGCAAACTGCTCTCCTACGTGGACGACGAAGCCTTTATCCGGGATGTGGCCAAAGTGAAGC
AGGAAAACAAGTTAAAGTTCTCTGCGTATCTAGAGAGGGAATACAAAGTCCACATCAACCCCAA
CTCGCTCTTCGACATCCAGGTGAAGCGGATTCACGAATATAAACGCCAGCTCCTCAACTGCCTC
CACGTCATCACACTGTACAACCGCATCAAGAAGGAACCCAATAAGTTTGTCGTGCCTCGAACGG
TGATGATTGGAGGGAAGGCTGCCCCTGGGTACCACATGGCCAAGATGATCATCAAACTCATTAC
AGCCATTGGGGATGTGGTCAACCACGATCCCGTGGTGGGAGACCGCCTCCGCGTGATCTTCCTG
GAGAACTACCGGGTCTCGCTGGCCGAGAAAGTGATCCCGGCCGCTGACCTCTCGGAGCAGATCT
CTACTGCGGGTACCGAGGCTTCGGGCACGGGCAACATGAAGTTCATGCTCAATGGGGCCCTGAC
CATTGGCACCATGGATGGGGCCAACGTGGAGATGGCGGAAGAGGCGGGGGAGGAGAACTTCTTT
ATCTTCGGCATGCGGGTGGAGGACGTGGAACGGCTTGACCAGAAAGGGTACAACGCCCAGGAGT
ATTATGACCGAATTCCTGAGCTTCGGCACGTCATCGATCAGCTGAGCAGTGGCTTCTTCTCCCC
GAAACAACCTGACCTGTTCAAGGACATTGTCAACATGCTCATGCACCATGACCGGTTTAAAGTC
TTCGCGGACTATGAAGACTACATTAAGTGCCAGGAGAGAGTCAGTGCCCTGTACAAGAACCCGA
GAGAGTGGACGCGGATGGTGATCCGGAACATAGCCACCTCTGGCAAGTTCTCCAGCGACCGCAC
CATTGCCCAGTATGCCAGGGAGATCTGGGGCGTGGAGCCTTCCCGCCAGCGCCTGCCGGCCCCG
GATGAGAAGATCTGAGCCTCTAGACCAGACCCAAACCTGCCCCTGAGTCTGTTCGCAATCCCTC
AGGCCTGCGCCAGCTCCTCATCCAGAGGCTGGGGTACTGCAGTTAGACCTAAACCTCTTCCTGG
AACCCCCATTTTCCCCAGCCTCCAGATCCCAGTGTTCAGCGCGACGAAGGACACTGCTCCCATC
CTGTCCTCAGGCTCCCTGCCCCTTCCTATTTATGGGTCCGACCAGCTGCACCCACTCCCCAATA
AACTGATTCTCCTTGGGAGCCTCCTCCCTCCTC

hide sequence

Protein Sequences


Protein RefSeqs	XP_003122636	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	ABF81977	(Get FASTA)	NCBI Sequence Viewer
	ABF81978	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000013848
	ENSSSCP00000013848.3
	ENSSSCP00000032945.3
	ENSSSCP00000068471.2
	ENSSSCP00000069027.1
	ENSSSCP00015033093.1
	ENSSSCP00015033379.1
	ENSSSCP00050016618.1

RefSeq Acc Id:

XP_003122636 ⟸ XM_003122588

- UniProtKB:

A0A8D0PGJ5 (UniProtKB/TrEMBL), A0A8D0PL15 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSRPLTDQEKRKQISVRGLAGVENVAELKKNFNRHLHFTLVKDRNVANARDYYFALAYTVRDHL
VGRWIRTQQHYYEKDPKRIYYLSLEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEMEE
DAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKITGGWQMEEADDWLRYGNAWEK
ARPEFTLPVHFYGRVEHTNQGAKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPNDFNLK
DFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCR
DPVRTSFDAFPDKVAIQLNDTHPSLAIPELMRILVDEERLEWEKAWDVTVRTCAYTNHTVLPEA
LERWPVHLMETLLPRHLQIIYEINQRFLNRVAAAYPGDVDRLRRMSLVEEGAVKRINMAHLCIA
GSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVMCNPGLAEVIAERIGEEY
IADLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFSAYLEREYKVHINPNSLFDIQVKRIHEYKR
QLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDR
LRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEA
GEENFFIFGMRVEDVERLDQKGYNAQEYYDRIPELRHVIDQLSSGFFSPKQPDLFKDIVNMLMH
HDRFKVFADYEDYIKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSR
QRLPAPDEKI

hide sequence

Ensembl Acc Id:

ENSSSCP00000032945 ⟸ ENSSSCT00000054386

Ensembl Acc Id:

ENSSSCP00000069027 ⟸ ENSSSCT00000083511

Ensembl Acc Id:

ENSSSCP00000068471 ⟸ ENSSSCT00000075431

Ensembl Acc Id:

ENSSSCP00000051912 ⟸ ENSSSCT00000059278

Ensembl Acc Id:

ENSSSCP00000049141 ⟸ ENSSSCT00000062161

Ensembl Acc Id:

ENSSSCP00000053679 ⟸ ENSSSCT00000046089

Ensembl Acc Id:

ENSSSCP00000013848 ⟸ ENSSSCT00000014234

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000013022	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015059972	UniProtKB/TrEMBL
	ENSSSCG00050029735	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000014234	ENTREZGENE
	ENSSSCT00000014234.5	UniProtKB/TrEMBL
	ENSSSCT00000054386.3	UniProtKB/TrEMBL
	ENSSSCT00000075431.2	UniProtKB/TrEMBL
	ENSSSCT00000083511.2	UniProtKB/TrEMBL
	ENSSSCT00015081797.1	UniProtKB/TrEMBL
	ENSSSCT00015082499.1	UniProtKB/TrEMBL
	ENSSSCT00050040158.1	UniProtKB/TrEMBL
Gene3D-CATH	Glycogen Phosphorylase B	UniProtKB/TrEMBL
InterPro	Glycg_phsphrylas	UniProtKB/TrEMBL
	Glyco_trans_35	UniProtKB/TrEMBL
	Pyridoxal_P_attach_site	UniProtKB/TrEMBL
KEGG Report	ssc:733659	UniProtKB/TrEMBL
NCBI Gene	PYGM	ENTREZGENE
PANTHER	GLYCOGEN PHOSPHORYLASE, MUSCLE FORM	UniProtKB/TrEMBL
	PTHR11468	UniProtKB/TrEMBL
Pfam	Phosphorylase	UniProtKB/TrEMBL
PIRSF	Pprylas_GlgP	UniProtKB/TrEMBL
PROSITE	PHOSPHORYLASE	UniProtKB/TrEMBL
Superfamily-SCOP	UDP-Glycosyltransferase/glycogen phosphorylase	UniProtKB/TrEMBL
UniProt	A0A286ZMZ9_PIG	UniProtKB/TrEMBL
	A0A5G2QU59_PIG	UniProtKB/TrEMBL
	A0A5G2RE07_PIG	UniProtKB/TrEMBL
	A0A8D0PGJ5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0PL15	ENTREZGENE, UniProtKB/TrEMBL
	F1RQQ8_PIG	UniProtKB/TrEMBL
	Q19PY1_PIG	UniProtKB/TrEMBL
	Q19PY2_PIG	UniProtKB/TrEMBL
VGNC ID	VGNC:92020	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations