AQP1 (aquaporin 1 (Colton blood group))

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Gene: AQP1 (aquaporin 1 (Colton blood group)) Sus scrofa

Analyze

Symbol:

AQP1

Name:

aquaporin 1 (Colton blood group)

RGD ID:

14123985

Description:

ENCODES a protein that exhibits ammonium transmembrane transporter activity (ortholog); carbon dioxide transmembrane transporter activity (ortholog); glycerol transmembrane transporter activity (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); camera-type eye morphogenesis (ortholog); carbon dioxide transmembrane transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Animal Mammary Neoplasms (ortholog); Aquaporin 1 Deficiency (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); axon terminus (ortholog); INTERACTS WITH cadmium dichloride; diprotium oxide; mercury dichloride

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

AQP-1; aquaporin-1; aquaporin-CHIP; water channel protein for red blood cells and kidney proximal tubule

RGD Orthologs

Human

Mouse

Rat

Chinchilla

Bonobo

Dog

Squirrel

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	AQP1 (aquaporin 1 (Colton blood group))	HGNC	Ensembl, Inparanoid, NCBI, OrthoDB, Panther
Mus musculus (house mouse):	Aqp1 (aquaporin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Aqp1 (aquaporin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Aqp1 (aquaporin 1 (Colton blood group))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	AQP1 (aquaporin 1 (Colton blood group))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	AQP1 (aquaporin 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Aqp1 (aquaporin 1 (Colton blood group))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	AQP1 (aquaporin 1 (Colton blood group))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Aqp1 (aquaporin 1 (Colton blood group))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	18	42,063,485 - 42,076,746 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	18	42,063,482 - 42,076,741 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

adenoid cystic carcinoma (ISO)

Animal Mammary Neoplasms (ISO)

Aquaporin 1 Deficiency (ISO)

autosomal recessive polycystic kidney disease (ISO)

brain edema (ISO)

carcinoma (ISO)

Cardiac Edema (ISO)

central pontine myelinolysis (ISO)

Charcot-Marie-Tooth disease type 2 (ISO)

choledochal cyst (ISO)

diabetes mellitus (ISO)

Ehlers-Danlos syndrome kyphoscoliotic type 2 (ISO)

Experimental Diabetes Mellitus (ISO)

Experimental Mammary Neoplasms (ISO)

genetic disease (ISO)

hydrocephalus (ISO)

hypertension (ISO)

hyperthyroidism (ISO)

Pain (ISO)

pleomorphic xanthoastrocytoma (ISO)

retinal vein occlusion (ISO)

Salivary Gland Neoplasms (ISO)

Spinal Cord Injuries (ISO)

status epilepticus (ISO)

toxic shock syndrome (ISO)

uveitis (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

cadmium dichloride (EXP)

diprotium oxide (EXP)

mercury dichloride (EXP)

water (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

ammonium transmembrane transport (IEA,ISS)

camera-type eye morphogenesis (IEA,ISO)

carbon dioxide transmembrane transport (IBA,IEA,ISS)

carbon dioxide transport (IEA,ISS)

cell migration (IEA,ISO)

cell volume homeostasis (IEA,ISS)

cellular homeostasis (IEA,ISS)

cellular hyperosmotic response (IEA,ISS)

cellular response to cAMP (IEA,ISS)

cellular response to copper ion (IEA,ISS)

cellular response to dexamethasone stimulus (IEA,ISS)

cellular response to hydrogen peroxide (IEA,ISS)

cellular response to hypoxia (IEA,ISS)

cellular response to inorganic substance (IEA,ISS)

cellular response to mechanical stimulus (IEA,ISS)

cellular response to mercury ion (IEA,ISS)

cellular response to nitric oxide (IEA)

cellular response to retinoic acid (IEA,ISS)

cellular response to salt stress (IEA,ISS)

cellular response to UV (IEA,ISS)

cerebrospinal fluid secretion (IEA)

cGMP-mediated signaling (IEA,ISS)

corticotropin secretion (IEA,ISO)

defense response to Gram-negative bacterium (IEA)

establishment of localization in cell (IEA,ISO)

establishment or maintenance of actin cytoskeleton polarity (IEA,ISS)

fibroblast migration (IEA,ISO)

glomerular filtration (IEA,ISO)

glycerol transmembrane transport (IEA,ISS)

hyperosmotic response (IBA,ISO)

intracellular water homeostasis (IEA,ISS)

lateral ventricle development (IEA,ISS)

lipid digestion (IEA,ISO)

metanephric descending thin limb development (IEA)

metanephric glomerulus vasculature development (IEA)

metanephric proximal convoluted tubule segment 2 development (IEA)

metanephric proximal straight tubule development (IEA)

metanephric proximal tubule development (ISO)

monoatomic cation transmembrane transport (IEA)

multicellular organismal-level water homeostasis (IEA,ISO)

negative regulation of apoptotic process (IEA,ISS)

negative regulation of cysteine-type endopeptidase activity involved in apoptotic process (IEA)

nitric oxide transport (IEA,ISS)

odontogenesis (IEA)

pancreatic juice secretion (IEA)

positive regulation of angiogenesis (IEA,ISS)

positive regulation of epithelial cell migration (ISO)

positive regulation of fibroblast migration (IEA,ISO)

positive regulation of fibroblast proliferation (IEA,ISS)

positive regulation of lamellipodium assembly (ISO)

positive regulation of saliva secretion (IEA,ISS)

potassium ion transmembrane transport (IEA)

potassium ion transport (IEA)

renal water absorption (IEA,ISO)

renal water transport (IBA,IEA,ISS)

response to estrogen (ISO)

response to hormone (ISO)

secretion by cell (IEA,ISO)

secretory granule organization (IEA,ISO)

sensory perception of pain (IEA,ISO)

transepithelial water transport (IEA,ISS)

transmembrane transport (IEA)

water transport (IEA,ISO,ISS)

wound healing (IEA,ISO)

Cellular Component

apical part of cell (IEA,ISS)

apical plasma membrane (IEA,ISO,ISS)

axon (IEA)

axon terminus (ISO)

basal plasma membrane (IEA,ISS)

basolateral plasma membrane (IEA,ISO,ISS)

brush border (IEA,ISS)

brush border membrane (IEA,ISS)

caveola (IEA)

cytoplasm (IEA,ISS)

extracellular exosome (IEA)

membrane (IEA)

neuronal cell body membrane (ISO)

nuclear membrane (IEA,ISS)

nucleus (IEA,ISS)

plasma membrane (IEA,ISO,ISS)

sarcolemma (IEA,ISS)

Molecular Function

ammonium transmembrane transporter activity (IBA,IEA,ISS)

carbon dioxide transmembrane transporter activity (IBA,IEA,ISS)

channel activity (IEA)

ephrin receptor binding (IEA)

glycerol transmembrane transporter activity (IBA,IEA,ISS)

identical protein binding (IEA)

intracellular cGMP-activated cation channel activity (IEA,ISS)

nitric oxide transmembrane transporter activity (IEA,ISS)

potassium channel activity (IEA,ISS)

potassium ion transmembrane transporter activity (IEA)

protein binding (ISO)

transmembrane transporter activity (IEA,ISS)

water channel activity (IBA,IEA,ISO,ISS)

water transmembrane transporter activity (IEA,ISS)

Molecular Pathway Annotations Click to see Annotation Detail View

amiloride pharmacodynamics pathway (ISO)

bendroflumethiazide pharmacodynamics pathway (ISO)

bumetanide pharmacodynamics pathway (ISO)

chlorothiazide pharmacodynamics pathway (ISO)

chlorthalidone pharmacodynamics pathway (ISO)

cystinuria pathway (ISO)

eplerenone pharmacodynamics pathway (ISO)

etacrynic acid pharmacodynamics pathway (ISO)

furosemide pharmacodynamics pathway (ISO)

Hartnup disease pathway (ISO)

hydrochlorothiazide pharmacodynamics pathway (ISO)

hydroflumethiazide pharmacodynamics pathway (ISO)

iminoglycinuria pathway (ISO)

lysinuric protein intolerance pathway (ISO)

metolazone pharmacodynamics pathway (ISO)

spironolactone pharmacodynamics pathway (ISO)

torasemide pharmacodynamics pathway (ISO)

triamterene pharmacodynamics pathway (ISO)

trichlormethiazide pharmacodynamics pathway (ISO)

water transport pathway (ISO)

References

Additional References at PubMed

PMID:14681463	PMID:16534851	PMID:17145712	PMID:18824632	PMID:20828411	PMID:22139335	PMID:25317682	PMID:26988150	PMID:27089501	PMID:27226190	PMID:29267208	PMID:29532265

Genomics

Comparative Map Data

AQP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	18	42,063,485 - 42,076,746 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	18	42,063,482 - 42,076,741 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

AQP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	30,911,853 - 30,925,516 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	7	30,911,853 - 30,925,517 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	30,951,468 - 30,965,131 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	30,917,993 - 30,931,656 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	7	30,724,707 - 30,738,371	NCBI
Celera	7	30,940,621 - 30,954,337 (+)	NCBI		Celera
Cytogenetic Map	7	p14.3	NCBI
HuRef	7	30,833,637 - 30,847,351 (+)	NCBI		HuRef
CHM1_1	7	30,951,350 - 30,965,064 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	31,049,501 - 31,063,163 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	31,000,921 - 31,014,637 (+)	NCBI

Aqp1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	55,313,284 - 55,325,540 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	55,313,417 - 55,325,540 (+)	Ensembl		GRCm39 Ensembl
GRCm38	6	55,336,299 - 55,348,555 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	55,336,432 - 55,348,555 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	55,286,293 - 55,298,549 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	55,266,010 - 55,278,133 (+)	NCBI		MGSCv36	mm8
Celera	6	55,870,108 - 55,882,362 (+)	NCBI		Celera
Cytogenetic Map	6	B3	NCBI
cM Map	6	27.38	NCBI

Aqp1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	4	84,482,512 - 84,494,690 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	84,482,512 - 84,494,690 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	89,700,946 - 89,713,083 (+)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	4	85,476,356 - 85,488,493 (+)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	4	83,882,115 - 83,894,263 (+)	NCBI	Rnor_WKY
Rnor_6.0	4	85,551,503 - 85,563,683 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	85,551,502 - 85,569,360 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	150,203,461 - 150,215,641 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	84,098,346 - 84,110,524 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	4	84,384,810 - 84,396,991 (+)	NCBI
Celera	4	79,349,727 - 79,361,905 (+)	NCBI		Celera
Cytogenetic Map	4	q24	NCBI

Aqp1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955410	32,066,196 - 32,078,717 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955410	32,066,196 - 32,078,661 (+)	NCBI	ChiLan1.0	ChiLan1.0

AQP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	7	84,047,527 - 84,061,283 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	31,524,933 - 31,538,602 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	31,644,331 - 31,658,141 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	31,644,331 - 31,658,141 (+)	Ensembl	panpan1.1		panPan2

AQP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	14	43,592,266 - 43,603,903 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	14	43,578,721 - 43,605,720 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	14	43,024,519 - 43,036,159 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	14	43,532,873 - 43,544,517 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	14	43,532,714 - 43,546,331 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	14	43,648,522 - 43,660,154 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	14	43,325,031 - 43,336,701 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	14	43,686,308 - 43,697,947 (+)	NCBI		UU_Cfam_GSD_1.0

Aqp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	87,935,407 - 87,948,638 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936478	7,147,027 - 7,160,401 (+)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936478	7,146,997 - 7,160,369 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

AQP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	27,456,553 - 27,473,196 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	27,456,259 - 27,470,728 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666042	77,234,082 - 77,247,886 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Aqp1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624783	164,609 - 177,766 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624783	164,615 - 177,317 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium	5	3		3	2		2	2
Low	5	1	3	2		5		1	1
Below cutoff						7

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_214454	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021078524	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002340208	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000111	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK237754	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK238030	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK393700	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY585335	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01064619	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSSSCT00000055832 ⟹ ENSSSCP00000047109

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	18	42,063,485 - 42,076,746 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000086405 ⟹ ENSSSCP00000060449

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	18	42,063,485 - 42,076,600 (-)	Ensembl

RefSeq Acc Id:

NM_214454 ⟹ NP_999619

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	18	42,065,384 - 42,076,551 (-)	NCBI

Sequence:

show sequence

ATGGCCAGCGAGTTCAAGAAGAAGATCTTCTGGAGGGCGGTGGTGGCCGAGTTCCTGGCCATGA
CCCTCTTCATCTTCATCAGCATCGGTTCTGCCCTGGGCTTCCAGTACCCCGTGAGGAACAACCA
GACTTCAGGTGCGGCCCAGGATAACGTGAAGGTGTCGCTGGCCTTTGGGCTGAGCATTGCCACG
CTGGCCCAGAGCGTGGGCCACATCAGCGGCGCCCACCTCAACCCGGCCGTCACGCTGGGGCTCC
TGCTCAGCTGCCAGATCAGTGTCCTCCGGGCTGTCATGTACATCATTGCCCAGTGTGTGGGGGC
CATCGTCGCCACTGCCATCCTCTCAGGCATCACCTCCTCCCTGCCCGGCAACTCCCTTGGCCTG
AACTCGCTGGCCCCTGGCGTGGACTCGGGCCAGGGCCTGGGCATCGAGATCATTGGCACCCTGC
AGCTGGTGCTGTGCGTGCTGGCCACCACCGACAGGAGGCGCCGGGACCTTGGGGGCTCTGCCCC
CCTTGCCATCGGCTTCTCTGTGGCCCTGGGACACCTGCTGGCGATTGACTACACCGGCTGCGGC
ATTAACCCTGCCCGGTCCTTCGGCTCCGCGGTGATCACGCACAACTTCCAGGACCACTGGGTTT
TCTGGGTGGGGCCGTTCATCGGAGGAGCCCTGGCCGTGCTCATCTATGACTTCATCCTGGCGCC
GCGCAGCAGCGACCTCACAGACCGCGTGAAGGTGTGGACCAGCGGCCAGGTGGAGGAGTATGAC
CTGGATGGCGACGACATCAACTCCAGGGTGGAGATGAAGCCCAAATAA

hide sequence

RefSeq Acc Id:

XM_021078524 ⟹ XP_020934183

RefSeq Status:

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	18	42,063,482 - 42,076,741 (-)	NCBI

Sequence:

show sequence

TGTGTCTGCATCCATCGCTGAGAGGAGGCCCGTGCAGTGTGGGGCGGGCCAGGAGCAAGGAGAG
GCCTTCCTCCCTTTGTGCTCCCCCCCCCCGGGGGGGCCCTATAAATAGGCCCAGCCCCGGCTGT
GGCTCAGCTCTCAGAGAGAGGCGAGCACCAGGCAGCCGTCTCAAGCCAAGCCCCCTGCCAACAT
GGCCAGCGAGTTCAAGAAGAAGATCTTCTGGAGGGCGGTGGTGGCCGAGTTCCTGGCCATGACC
CTCTTCATCTTCATCAGCATCGGTTCTGCCCTGGGCTTCCAGTACCCCGTGAGGAACAACCAGA
CTTCAGGTGCGGCCCAGGATAACGTGAAGGTGTCGCTGGCCTTTGGGCTGAGCATTGCCACGCT
GGCCCAGAGCGTGGGCCACATCAGCGGCGCCCACCTCAACCCGGCCGTCACGCTGGGGCTCCTG
CTCAGCTGCCAGATCAGTGTCCTCCGGGCTGTCATGTACATCATTGCCCAGTGTGTGGGGGCCA
TCGTCGCCACTGCCATCCTCTCAGGCATCACCTCCTCCCTGCCCGGCAACTCCCTTGGCCTGAA
CTCGCTGGCCCCTGGCGTGAACTCGGGCCAGGGCCTGGGCATCGAGATCATTGGCACCCTGCAG
CTGGTGCTGTGCGTGCTGGCCACCACCGACAGGAGGCGCCGGGACCTTGGGGGCTCTGCCCCCC
TTGCCATCGGCTTCTCTGTGGCCCTGGGACACCTGCTGGCGATTGACTACACCGGCTGCGGCAT
TAACCCTGCCCGGTCCTTCGGCTCCGCGGTGATCACGCACAACTTCCAGGACCACTGGGTTTTC
TGGGTGGGGCCGTTCATCGGAGGAGCCCTGGCCGTGCTCATCTATGACTTCATCCTGGCGCCGC
GCAGCAGCGACCTCACAGACCGCGTGAAGGTGTGGACCAGCGGCCAGGTGGAGGAGTATGACCT
GGATGGCGACGACATCAACTCCAGGGTGGAGATGAAGCCCAAATAGGAGGGGCCTGGCCCGGGC
ATCCATGTGGGGGGGGCGAGGGCGGGCGGAGGGGGGGAGGGGTGATATCCACATTGTAGACACT
CTGACAAGCTGGCCAAAGTCACTTCCCAAAGATCCGCAGGACCTGCGCGGTCAAGCCTGATTTG
GGGCTGTTGCTCTCACCTTCTTTCTCTTTCTCCGTTTTCTGGCCTCAGGACTTCCTGGGGACCG
AGATTCACCCATCACCCACTCCCTTGACGTCACAGAGGAGGTGAAAGAGAGGGACCCACCCTGC
TAGGTTGTCCCCTCAGAGTGTGACGGGAGGTGTGCCAGAAAGTCCCCCTCATCCCAAAGTTGCT
CACCAACGCACCTGCTGCAGGTGCCTGGGGCTCCATGGTGATGGCGTTGTGTCTTTGGGCGTCG
CCCTCTTTCCTAGAATGAGCACGTGCCCTCGAAGGTGCTCGGAGCGGGAAGAGAGCCCAGCAGG
TGCAGCCGTGGGGGCAGGTGGCAGACAGGCCTTGTCCTTGCAGCCTGGCTTGCTTCCAGGGCAC
CCCCGCCCCAACCCTGTGGTGTGCTGCACGACCCTGGGCACATTCCAATCTTGGGGCCTCAGTG
ACCCCATCTGTAAAGTGGCAGGGACCCCATAAAGAGCTATATGGGCCTGAGCCCCCCTCTTTAG
GATTCTGTAAGTATAGACACACCGCAGGTTCTGGAAGATGTAGTCTGGACCAGCGCTGCTTCTT
CCACTTGCCAAGTATACAGCTGTACCTACCCATCTGTGTGCATACCTGTACATAGGCTTAGTGT
CTCAAAGCAGAGGGCGATATTCGGCCATCGGATGTCCCCGTTCCCAGGGGAGAGGGCTGATCCC
TAGGCACTGGCTCCACTGGACAGAGCCTGCTGTTGCAGAATGAAGGCCTTGAAGGGGCGAGGGA
GGGATGACCGTGTTCCTTCATGAGTTGTGGTTGGTCTTTTCCACCCATCACTGCACCACCCCCA
TCATCACGCAGTTTTTCCCTCTTCCTGCCAGTGTAGACGCAGGCCACCGTGTGCAGGTGCATTT
ATTAAAGGGCACTGGGTCATCTGAAGGTTATCAAACCTGAGGACAGATAATCGTGATTGGGATC
AGCCCTCGGAGGCCGACGCCCTGGCTGGATGCTGAGGGGAATTTTCAGGTCCCAGCTGATCCTA
CGGGGTGGGGAGCAGCAGCCCCCCCATTCCCAAGCTCCCGAGCGGAGGCCTTGGGCAGCTGGGT
GACCTGCACGGCTCCCCAGGCCATAGCCTTCCCTCCTCATTTGTTTGGAGGGAGAGCTGGTTTT
GACCCGATGAAGTAGCTCTCTATGGCTGCAGCCCCAGAGCAATTCAGAGCACAGTCTGCTTGGG
GCCAGCTATCTACACGTCCGTTCAATTCCACCAGGGCCAGAGCAGGTCCTCCCATGTGCCCGTG
GCCATTGACTGTGACAAAAACGGAGAGACGCAATGCACAGGTATCTGGAAGCAGCAGGACAATC
AGGAGGCCCTTGATGGTCACGACCCCTCATGACATCCGCACACTCCCTTCTCCCTTTCCTAGCA
AAACCTTCTAGCCCATTTAACAGCTAAAGAAACTGAGGCCAGGACCCACAGCTAGATCATGATT
TGGCCAGGCCTCCTAGCTGCCAGGGCCATGTCTCTGGCTACTCCTTGGACCGGGAGACTGGCCC
CTCTCTTTCCCAGCTTCTGCATTTCCGCCTGGGCAATGGCCAGGGGCCAGGAGCGGGGAGGGTT
GTGCTGCAGGGGGGGGGGGGGGGCGGTGGTCAGACCCATCCTGTCCTGTCCTGGCTGCTGCCTT
CCAGGACCCTGCATCTGTCTGCTCTGCGTATATGGCTCTTTGGAATTGGAATTACATCATATGT
TAAGAAAATAAAGAATAACAGAGGTCA

hide sequence

RefSeq Acc Id:

XR_002340208

RefSeq Status:

Type:

NON-CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	18	42,063,482 - 42,076,711 (-)	NCBI

Sequence:

show sequence

CGTGCAGTGTGGGGCGGGCCAGGAGCAAGGAGAGGCCTTCCTCCCTTTGTGCTCCCCCCCCCCG
GGGGGGCCCTATAAATAGGCCCAGCCCCGGCTGTGGCTCAGCTCTCAGAGAGAGGCGAGCACCA
GGCAGCCGTCTCAAGCCAAGCCCCCTGCCAACATGGCCAGCGAGTTCAAGAAGAAGATCTTCTG
GAGGGCGGTGGTGGCCGAGTTCCTGGCCATGACCCTCTTCATCTTCATCAGCATCGGTTCTGCC
CTGGGCTTCCAGTACCCCGTGAGGAACAACCAGACTTCAGGTGCGGCCCAGGATAACGTGAAGG
TGTCGCTGGCCTTTGGGCTGAGCATTGCCACGCTGGCCCAGAGCGTGGGCCACATCAGCGGCGC
CCACCTCAACCCGGCCGTCACGCTGGGGCTCCTGCTCAGCTGCCAGATCAGTGTCCTCCGGGCT
GTCATGTACATCATTGCCCAGTGTGTGGGGGCCATCGTCGCCACTGCCATCCTCTCAGGCATCA
CCTCCTCCCTGCCCGGCAACTCCCTTGGCCTGAACTCGCTGGCCCCTGGCGTGAACTCGGGCCA
GGGCCTGGGCATCGAGATCATTGGCACCCTGCAGCTGGTGCTGTGCGTGCTGGCCACCACCGAC
AGGAGGCGCCGGGACCTTGGGGGCTCTGCCCCCCTTGCCATCGGCTTCTCTGTGGCCCTGGGAC
ACCTGCTGGCGGTGAGTGGGGGACCTTCCCAGGTGGGGGTGGGGAGGGCAGAGCCAGGCAGGTG
TCCCGTGGAGGACAGTGGGTGGGATCTGGACAGGGCTCATTCCACGGGATGGGGGGACCAGCTG
CCCGTGAGAGGGACGCCTAGGGACCGCCCGACCATCTTTCTGAGTCTGTTTGTCCCCTCCCTGT
TTCCTCCCTTGTCCTCTCTCTCCATCTCTCCATGTCACCCTCTGGCTTCCTCTCCCTCTGCCTG
TTTCTCCGTCTCGTGTCCGGCCCGCTGCCCCCACCCAGATTGACTACACCGGCTGCGGCATTAA
CCCTGCCCGGTCCTTCGGCTCCGCGGTGATCACGCACAACTTCCAGGACCACTGGGTTTTCTGG
GTGGGGCCGTTCATCGGAGGAGCCCTGGCCGTGCTCATCTATGACTTCATCCTGGCGCCGCGCA
GCAGCGACCTCACAGACCGCGTGAAGGTGTGGACCAGCGGCCAGGTGGAGGAGTATGACCTGGA
TGGCGACGACATCAACTCCAGGGTGGAGATGAAGCCCAAATAGGAGGGGCCTGGCCCGGGCATC
CATGTGGGGGGGGCGAGGGCGGGCGGAGGGGGGGAGGGGTGATATCCACATTGTAGACACTCTG
ACAAGCTGGCCAAAGTCACTTCCCAAAGATCCGCAGGACCTGCGCGGTCAAGCCTGATTTGGGG
CTGTTGCTCTCACCTTCTTTCTCTTTCTCCGTTTTCTGGCCTCAGGACTTCCTGGGGACCGAGA
TTCACCCATCACCCACTCCCTTGACGTCACAGAGGAGGTGAAAGAGAGGGACCCACCCTGCTAG
GTTGTCCCCTCAGAGTGTGACGGGAGGTGTGCCAGAAAGTCCCCCTCATCCCAAAGTTGCTCAC
CAACGCACCTGCTGCAGGTGCCTGGGGCTCCATGGTGATGGCGTTGTGTCTTTGGGCGTCGCCC
TCTTTCCTAGAATGAGCACGTGCCCTCGAAGGTGCTCGGAGCGGGAAGAGAGCCCAGCAGGTGC
AGCCGTGGGGGCAGGTGGCAGACAGGCCTTGTCCTTGCAGCCTGGCTTGCTTCCAGGGCACCCC
CGCCCCAACCCTGTGGTGTGCTGCACGACCCTGGGCACATTCCAATCTTGGGGCCTCAGTGACC
CCATCTGTAAAGTGGCAGGGACCCCATAAAGAGCTATATGGGCCTGAGCCCCCCTCTTTAGGAT
TCTGTAAGTATAGACACACCGCAGGTTCTGGAAGATGTAGTCTGGACCAGCGCTGCTTCTTCCA
CTTGCCAAGTATACAGCTGTACCTACCCATCTGTGTGCATACCTGTACATAGGCTTAGTGTCTC
AAAGCAGAGGGCGATATTCGGCCATCGGATGTCCCCGTTCCCAGGGGAGAGGGCTGATCCCTAG
GCACTGGCTCCACTGGACAGAGCCTGCTGTTGCAGAATGAAGGCCTTGAAGGGGCGAGGGAGGG
ATGACCGTGTTCCTTCATGAGTTGTGGTTGGTCTTTTCCACCCATCACTGCACCACCCCCATCA
TCACGCAGTTTTTCCCTCTTCCTGCCAGTGTAGACGCAGGCCACCGTGTGCAGGTGCATTTATT
AAAGGGCACTGGGTCATCTGAAGGTTATCAAACCTGAGGACAGATAATCGTGATTGGGATCAGC
CCTCGGAGGCCGACGCCCTGGCTGGATGCTGAGGGGAATTTTCAGGTCCCAGCTGATCCTACGG
GGTGGGGAGCAGCAGCCCCCCCATTCCCAAGCTCCCGAGCGGAGGCCTTGGGCAGCTGGGTGAC
CTGCACGGCTCCCCAGGCCATAGCCTTCCCTCCTCATTTGTTTGGAGGGAGAGCTGGTTTTGAC
CCGATGAAGTAGCTCTCTATGGCTGCAGCCCCAGAGCAATTCAGAGCACAGTCTGCTTGGGGCC
AGCTATCTACACGTCCGTTCAATTCCACCAGGGCCAGAGCAGGTCCTCCCATGTGCCCGTGGCC
ATTGACTGTGACAAAAACGGAGAGACGCAATGCACAGGTATCTGGAAGCAGCAGGACAATCAGG
AGGCCCTTGATGGTCACGACCCCTCATGACATCCGCACACTCCCTTCTCCCTTTCCTAGCAAAA
CCTTCTAGCCCATTTAACAGCTAAAGAAACTGAGGCCAGGACCCACAGCTAGATCATGATTTGG
CCAGGCCTCCTAGCTGCCAGGGCCATGTCTCTGGCTACTCCTTGGACCGGGAGACTGGCCCCTC
TCTTTCCCAGCTTCTGCATTTCCGCCTGGGCAATGGCCAGGGGCCAGGAGCGGGGAGGGTTGTG
CTGCAGGGGGGGGGGGGGGGCGGTGGTCAGACCCATCCTGTCCTGTCCTGGCTGCTGCCTTCCA
GGACCCTGCATCTGTCTGCTCTGCGTATATGGCTCTTTGGAATTGGAATTACATCATATGTTAA
GAAAATAAAGAATAACAGAGGTCA

hide sequence

Protein Sequences


Protein RefSeqs	NP_999619	(Get FASTA)	NCBI Sequence Viewer
	XP_020934183	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAS98212	(Get FASTA)	NCBI Sequence Viewer
	Q6PQZ1	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	XP_020934183 ⟸ XM_021078524
- Peptide Label:	isoform X1
- UniProtKB:	A0A287AT23 (UniProtKB/TrEMBL), A0A4X1T015 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASEFKKKIFWRAVVAEFLAMTLFIFISIGSALGFQYPVRNNQTSGAAQDNVKVSLAFGLSIAT LAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGNSLGL NSLAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGFSVALGHLLAIDYTGCG INPARSFGSAVITHNFQDHWVFWVGPFIGGALAVLIYDFILAPRSSDLTDRVKVWTSGQVEEYD LDGDDINSRVEMKPK hide sequence

RefSeq Acc Id:

NP_999619 ⟸ NM_214454

- UniProtKB:

Q6PQZ1 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MASEFKKKIFWRAVVAEFLAMTLFIFISIGSALGFQYPVRNNQTSGAAQDNVKVSLAFGLSIAT
LAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGNSLGL
NSLAPGVDSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGFSVALGHLLAIDYTGCG
INPARSFGSAVITHNFQDHWVFWVGPFIGGALAVLIYDFILAPRSSDLTDRVKVWTSGQVEEYD
LDGDDINSRVEMKPK

hide sequence

RefSeq Acc Id:

ENSSSCP00000047109 ⟸ ENSSSCT00000055832

RefSeq Acc Id:

ENSSSCP00000060449 ⟸ ENSSSCT00000086405

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000033190	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015078179	UniProtKB/TrEMBL
	ENSSSCG00025076186	UniProtKB/TrEMBL
	ENSSSCG00030002622	UniProtKB/TrEMBL
	ENSSSCG00035023965	UniProtKB/TrEMBL
	ENSSSCG00045034308	UniProtKB/TrEMBL
	ENSSSCG00050022220	UniProtKB/TrEMBL
	ENSSSCG00055005492	UniProtKB/TrEMBL
	ENSSSCG00060011960	UniProtKB/TrEMBL
	ENSSSCG00065007492	UniProtKB/TrEMBL
	ENSSSCG00070005506	UniProtKB/TrEMBL
Ensembl Protein	ENSSSCP00000047109	ENTREZGENE
	ENSSSCP00000047109.1	UniProtKB/TrEMBL
	ENSSSCP00015044351.1	UniProtKB/TrEMBL
	ENSSSCP00025047110.1	UniProtKB/TrEMBL
	ENSSSCP00025047126.1	UniProtKB/TrEMBL
	ENSSSCP00030001313.1	UniProtKB/TrEMBL
	ENSSSCP00030001326.1	UniProtKB/TrEMBL
	ENSSSCP00035012318.1	UniProtKB/TrEMBL
	ENSSSCP00035012325.1	UniProtKB/TrEMBL
	ENSSSCP00045041033.1	UniProtKB/TrEMBL
	ENSSSCP00045041070.1	UniProtKB/TrEMBL
	ENSSSCP00050012462.1	UniProtKB/TrEMBL
	ENSSSCP00055008480.1	UniProtKB/TrEMBL
	ENSSSCP00055008503.1	UniProtKB/TrEMBL
	ENSSSCP00060006114.1	UniProtKB/TrEMBL
	ENSSSCP00065004192.1	UniProtKB/TrEMBL
	ENSSSCP00065004203.1	UniProtKB/TrEMBL
	ENSSSCP00070008544.1	UniProtKB/TrEMBL
	ENSSSCP00070008550.1	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000055832	ENTREZGENE
	ENSSSCT00000055832.3	UniProtKB/TrEMBL
	ENSSSCT00015105745.1	UniProtKB/TrEMBL
	ENSSSCT00025105423.1	UniProtKB/TrEMBL
	ENSSSCT00025105446.1	UniProtKB/TrEMBL
	ENSSSCT00030003353.1	UniProtKB/TrEMBL
	ENSSSCT00030003384.1	UniProtKB/TrEMBL
	ENSSSCT00035031446.1	UniProtKB/TrEMBL
	ENSSSCT00035031459.1	UniProtKB/TrEMBL
	ENSSSCT00045058679.1	UniProtKB/TrEMBL
	ENSSSCT00045058719.1	UniProtKB/TrEMBL
	ENSSSCT00050029969.1	UniProtKB/TrEMBL
	ENSSSCT00055010724.1	UniProtKB/TrEMBL
	ENSSSCT00055010751.1	UniProtKB/TrEMBL
	ENSSSCT00060015627.1	UniProtKB/TrEMBL
	ENSSSCT00065010052.1	UniProtKB/TrEMBL
	ENSSSCT00065010070.1	UniProtKB/TrEMBL
	ENSSSCT00070010409.1	UniProtKB/TrEMBL
	ENSSSCT00070010415.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.1080.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	Aquaporin-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Aquaporin_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Aquaporin_transptr	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	MIP	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	MIP_CS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	ssc:407773	UniProtKB/Swiss-Prot
NCBI Gene	AQP1	ENTREZGENE
PANTHER	AQUAPORIN-1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR19139	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	MIP	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS	AQUAPORIN1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	MINTRINSICP	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	MIP	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF81338	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGRFAMs	MIP	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A287AT23	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1T010_PIG	UniProtKB/TrEMBL
	A0A4X1T015	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0TK20_PIG	UniProtKB/TrEMBL
	A0A8D0V6F3_PIG	UniProtKB/TrEMBL
	AQP1_PIG	UniProtKB/Swiss-Prot, ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - OMIM

RGD Manual Annotations

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