NAA30 (N-alpha-acetyltransferase 30, NatC catalytic subunit) - Rat Genome Database

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Gene: NAA30 (N-alpha-acetyltransferase 30, NatC catalytic subunit) Sus scrofa
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Symbol: NAA30
Name: N-alpha-acetyltransferase 30, NatC catalytic subunit
RGD ID: 14122003
Description: ENCODES a protein that exhibits acyltransferase activity (inferred); acyltransferase activity, transferring groups other than amino-acyl groups (inferred); peptide alpha-N-acetyltransferase activity (inferred); ASSOCIATED WITH genetic disease (ortholog); FOUND IN NatC complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: N(alpha)-acetyltransferase 30, NatC catalytic subunit; N-alpha-acetyltransferase 30
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1186,530,136 - 186,555,891 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11186,529,789 - 186,553,074 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21207,102,836 - 207,112,281 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA)
cytosol  (IEA)
NatC complex  (IBA,IEA,ISO)
nucleus  (IEA)

References
Additional References at PubMed
PMID:14681463   PMID:17145712   PMID:30032202  


Genomics

Comparative Map Data
NAA30
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1186,530,136 - 186,555,891 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11186,529,789 - 186,553,074 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21207,102,836 - 207,112,281 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NAA30
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381457,390,586 - 57,415,906 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1457,390,544 - 57,415,906 (+)EnsemblGRCh38hg38GRCh38
GRCh371457,857,304 - 57,882,624 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361456,927,024 - 56,947,636 (+)NCBINCBI36Build 36hg18NCBI36
Build 341456,927,023 - 56,947,636NCBI
Celera1437,907,349 - 37,929,551 (+)NCBICelera
Cytogenetic Map14q22.3NCBI
HuRef1438,022,011 - 38,044,214 (+)NCBIHuRef
CHM1_11457,795,881 - 57,818,076 (+)NCBICHM1_1
T2T-CHM13v2.01451,597,048 - 51,622,359 (+)NCBIT2T-CHM13v2.0
Naa30
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391449,409,703 - 49,428,346 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1449,409,683 - 49,428,488 (+)EnsemblGRCm39 Ensembl
GRCm381449,172,246 - 49,190,889 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1449,172,226 - 49,191,031 (+)EnsemblGRCm38mm10GRCm38
MGSCv371449,791,902 - 49,810,706 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361448,094,178 - 48,112,982 (+)NCBIMGSCv36mm8
Celera1445,373,858 - 45,392,263 (+)NCBICelera
Cytogenetic Map14C1NCBI
cM Map1425.42NCBI
Naa30
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81524,935,060 - 24,954,435 (+)NCBIGRCr8
mRatBN7.21522,454,914 - 22,474,789 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1522,455,662 - 22,474,789 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1525,227,770 - 25,246,769 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01526,194,458 - 26,213,423 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01524,436,272 - 24,455,276 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01526,032,760 - 26,052,774 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1526,033,791 - 26,052,753 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01529,961,843 - 29,982,055 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41525,155,223 - 25,174,185 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1522,832,501 - 22,851,459 (+)NCBICelera
Cytogenetic Map15p14NCBI
Naa30
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546611,287,789 - 11,308,449 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495546611,287,789 - 11,308,449 (+)NCBIChiLan1.0ChiLan1.0
NAA30
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21558,495,764 - 58,517,956 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11457,712,143 - 57,734,470 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01437,960,067 - 37,982,287 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11456,230,694 - 56,252,718 (+)NCBIpanpan1.1PanPan1.1panPan2
NAA30
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1832,939,442 - 32,959,854 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl832,939,953 - 32,957,240 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha832,707,073 - 32,727,512 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0833,190,309 - 33,210,774 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl833,190,816 - 33,207,406 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1832,793,445 - 32,813,895 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0832,869,026 - 32,889,470 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0833,245,052 - 33,265,506 (+)NCBIUU_Cfam_GSD_1.0
Naa30
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864072,213,773 - 72,235,124 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364951,956,333 - 1,977,905 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364951,956,575 - 1,977,911 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NAA30
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12434,567,497 - 34,590,379 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2434,568,887 - 34,587,131 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605322,789,293 - 22,811,275 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Naa30
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248842,421,389 - 2,442,701 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248842,420,998 - 2,444,952 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in NAA30
399 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 3 1 1 4 1
Low 10 4 4 1 19 2 2 3
Below cutoff

Sequence


RefSeq Acc Id: ENSSSCT00000049471   ⟹   ENSSSCP00000043410
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1186,530,136 - 186,555,891 (+)Ensembl
RefSeq Acc Id: XM_021102575   ⟹   XP_020958234
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11186,529,789 - 186,553,074 (+)NCBI
Sequence:
RefSeq Acc Id: XP_020958234   ⟸   XM_021102575
- UniProtKB: A0A4X1WD70 (UniProtKB/TrEMBL),   A0A287AHF2 (UniProtKB/TrEMBL),   A0A8D1DDT5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000043410   ⟸   ENSSSCT00000049471
Protein Domains
N-acetyltransferase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000031332 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015052801 UniProtKB/TrEMBL
  ENSSSCG00025053073 UniProtKB/TrEMBL
  ENSSSCG00030009027 UniProtKB/TrEMBL
  ENSSSCG00035026967 UniProtKB/TrEMBL
  ENSSSCG00040010606 UniProtKB/TrEMBL
  ENSSSCG00045017148 UniProtKB/TrEMBL
  ENSSSCG00050065672 UniProtKB/TrEMBL
  ENSSSCG00055002066 UniProtKB/TrEMBL
  ENSSSCG00060001164 UniProtKB/TrEMBL
  ENSSSCG00065006746 UniProtKB/TrEMBL
  ENSSSCG00070030567 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000049471 ENTREZGENE
  ENSSSCT00000049471.3 UniProtKB/TrEMBL
  ENSSSCT00015070302.1 UniProtKB/TrEMBL
  ENSSSCT00025072654.1 UniProtKB/TrEMBL
  ENSSSCT00030012337.1 UniProtKB/TrEMBL
  ENSSSCT00035035608.1 UniProtKB/TrEMBL
  ENSSSCT00040013794.1 UniProtKB/TrEMBL
  ENSSSCT00045029234.1 UniProtKB/TrEMBL
  ENSSSCT00050089444.1 UniProtKB/TrEMBL
  ENSSSCT00055003883.1 UniProtKB/TrEMBL
  ENSSSCT00060001419.1 UniProtKB/TrEMBL
  ENSSSCT00065009054.1 UniProtKB/TrEMBL
  ENSSSCT00070061533.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.630.30 UniProtKB/TrEMBL
InterPro Acyl_CoA_acyltransferase UniProtKB/TrEMBL
  GNAT_dom UniProtKB/TrEMBL
  NAA30-like UniProtKB/TrEMBL
NCBI Gene NAA30 ENTREZGENE
PANTHER N-ALPHA-ACETYLTRANSFERASE 30 UniProtKB/TrEMBL
  PTHR45896 UniProtKB/TrEMBL
Pfam Acetyltransf_1 UniProtKB/TrEMBL
PROSITE GNAT UniProtKB/TrEMBL
Superfamily-SCOP SSF55729 UniProtKB/TrEMBL
UniProt A0A287AHF2 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1WD70 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1DDT5 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:96751 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-12-03 NAA30  N-alpha-acetyltransferase 30, NatC catalytic subunit  NAA30  N(alpha)-acetyltransferase 30, NatC catalytic subunit  Symbol and/or name change 5135510 APPROVED