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Gene: EMX2 (empty spiracles homeobox 2) Sus scrofa

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Symbol:

EMX2

Name:

empty spiracles homeobox 2

RGD ID:

14113579

Description:

ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity, RNA polymerase II-specific (inferred); sequence-specific double-stranded DNA binding (inferred); INVOLVED IN anterior/posterior pattern specification (ortholog); brain development (ortholog); cell proliferation in forebrain (ortholog); ASSOCIATED WITH colorectal adenocarcinoma (ortholog); colorectal cancer (ortholog); esophagus adenocarcinoma (ortholog); FOUND IN nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

homeobox protein EMX2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	127,650,688 - 127,655,706 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	127,649,675 - 127,656,972 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	139,052,130 - 139,055,522 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

colorectal adenocarcinoma (ISO)

colorectal cancer (ISO)

esophagus adenocarcinoma (ISO)

Female Urogenital Diseases (ISO)

genetic disease (ISO)

lung adenocarcinoma (ISO)

Lung Neoplasms (ISO)

lung squamous cell carcinoma (ISO)

malignant pleural mesothelioma (ISO)

Schizencephaly (ISO)

stomach cancer (ISO)

syndromic microphthalmia 11 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

anterior/posterior pattern specification (IEA,ISO)

brain development (IBA,IEA,ISO)

cell proliferation in forebrain (IEA,ISO)

central nervous system development (IBA)

cerebral cortex development (IEA,ISO)

cerebral cortex regionalization (IEA,ISO)

dentate gyrus development (IEA,ISO)

forebrain cell migration (IEA,ISO)

forebrain development (IEA,ISO)

neuron differentiation (IBA,IEA,ISO)

neuron migration (IEA,ISO)

regulation of DNA-templated transcription (IEA)

regulation of gene expression (IEA,ISO)

regulation of transcription by RNA polymerase II (IBA,IEA)

response to xenobiotic stimulus (IEA,ISO)

stereocilium bundle organization (IEA)

ureter morphogenesis (IEA,ISO)

Cellular Component

nucleus (IBA,IEA)

Molecular Function

DNA binding (IEA)

DNA-binding transcription factor activity, RNA polymerase II-specific (IBA,IEA)

protein binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IBA)

sequence-specific double-stranded DNA binding (IEA)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

EMX2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	127,650,688 - 127,655,706 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	127,649,675 - 127,656,972 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	139,052,130 - 139,055,522 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

EMX2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	117,542,746 - 117,549,546 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	117,542,445 - 117,549,546 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	119,302,257 - 119,309,057 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	119,291,946 - 119,299,043 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	119,291,945 - 119,299,043	NCBI
Celera	10	113,031,949 - 113,039,046 (+)	NCBI		Celera
Cytogenetic Map	10	q26.11	NCBI
HuRef	10	112,930,193 - 112,937,289 (+)	NCBI		HuRef
CHM1_1	10	119,586,078 - 119,593,194 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	10	118,437,136 - 118,443,925 (+)	NCBI		T2T-CHM13v2.0

Emx2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	59,447,122 - 59,453,789 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	59,446,804 - 59,453,789 (+)	Ensembl		GRCm39 Ensembl
GRCm38	19	59,458,690 - 59,465,357 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	59,458,372 - 59,465,357 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	59,533,180 - 59,539,847 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	59,511,622 - 59,518,607 (+)	NCBI		MGSCv36	mm8
Celera	19	61,658,178 - 61,664,837 (+)	NCBI		Celera
Cytogenetic Map	19	D3	NCBI
cM Map	19	56.28	NCBI

Emx2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	268,612,663 - 268,619,671 (+)	NCBI		GRCr8
mRatBN7.2	1	258,626,584 - 258,633,594 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	258,626,584 - 258,633,594 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	266,832,393 - 266,839,395 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	273,538,418 - 273,545,420 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	266,179,101 - 266,186,108 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	280,633,938 - 280,640,946 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	280,633,938 - 280,640,946 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	287,993,648 - 288,000,656 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	266,004,257 - 266,011,265 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	1	254,275,943 - 254,282,950 (+)	NCBI		Celera
Cytogenetic Map	1	q55	NCBI

Emx2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955431	22,192,446 - 22,199,279 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955431	22,192,446 - 22,199,141 (+)	NCBI	ChiLan1.0	ChiLan1.0

EMX2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	129,405,618 - 129,419,620 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	129,417,530 - 129,424,956 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	114,124,759 - 114,132,109 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	117,551,451 - 117,557,972 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	117,551,451 - 117,557,972 (+)	Ensembl	panpan1.1		panPan2

EMX2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	28,002,966 - 28,009,955 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	28,003,710 - 28,009,035 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	28,146,341 - 28,153,333 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	28,532,618 - 28,539,604 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	28	28,532,897 - 28,538,743 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	28	28,094,345 - 28,101,342 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	28,108,855 - 28,115,187 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	28,303,055 - 28,310,050 (+)	NCBI		UU_Cfam_GSD_1.0

Emx2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	18,241,303 - 18,247,914 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936486	7,313,190 - 7,319,995 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936486	7,313,689 - 7,319,971 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

EMX2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	110,347,043 - 110,353,647 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	110,347,379 - 110,353,643 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	71,602,815 - 71,610,687 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Emx2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624737	29,103,279 - 29,110,344 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624737	29,103,378 - 29,110,356 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in EMX2
86 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	ectoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
1	11	1	6	4	11	3	3	1

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005671489	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021073408	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000096	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK347885	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK389918	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CT954249	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000049708 ⟹ ENSSSCP00000042074

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	14	127,650,688 - 127,655,706 (+)	Ensembl

RefSeq Acc Id:

XM_005671489 ⟹ XP_005671546

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	127,649,964 - 127,656,972 (+)	NCBI

Sequence:

show sequence

AGGAGAAGAAGCCGAAGGAAGAGGAGGAGGCGAAAGAGGAGAAGAAGCCGCAGCGGGCGCCGCA
GGAGCGAGTGAGCTAGGAGCGCGGGGTTACGGCGCGAAGAGGCCAGGCGGCCCGGCGGGCGCAG
GAGGTTCGGCCAAGGCAGCGGCGCCGACTCCGTTCCACTCTCGGCCCGGATCCAGGCCTCCGGG
TTCCCAGGCGCTCGCCTCCCTCTGACGCACTTTAAAGAGTCTCCCCCCTTCCACCTCAGGGCGA
GTAATAGCGACCAATCATCAAGCCATTTACCAGGCTTCGGAGGAAGCTGTTTATGTGATCCCCG
CACTAATTAGGCTCATGAACTAACAAATCGTTTGCACAACTTGTGAAGAAGCGAACACTTCCAT
GGATTGTCCTTGGACTTAGGGCGCCCTGCCCGCCTTTTGCAGAGGAGAGAAAACTTTTTTTTTT
GCCTCCCCCGAGAAACTCCCCCCCCCGCGCGCCTCTAACTCCGATCCCCCCACGCCATCTCGCC
CCCCCCCAAAAAAAATTACCCCAATCCACGCCTGCAAATTCTTCTGGAAGGATTTTTCCTCCTC
TCTCCAGGTTGGGCGCGTTTGGTGCAAGATTCTCGGGATCCACGGCGTTCTCTCTCCCTCCCCC
TCCCCCTCCTTTCCTTTTTCCTTTCCTTTCCTTTCTTTCTTCCTTTCCTCCCCCCACCCCCACC
CCCAACAAACAAGTCCCCAATTCCCGTCCGTCCTTGCCGCGGGCAGCGGACAGCGGGCGGCGGA
GGCAGCGCGCCGCGGTCGCCGGGAGCCGGGAGCCCCGGGCGCCCGCTCCTCGGCACAGCATGTT
CCAGCCGGCGCCCAAGCGCTGCTTCACCATCGAGTCGCTGGTGGCCAAGGACAGTCCCCTGCCC
GCCTCGCGCTCCGAGGACCCCATCCGTCCCGCGGCGCTCAGCTACGCCAACTCCAGCCCCATAA
ACCCGTTCCTCAACGGCTTCCACTCGGCCGCCGCCGCCGCCGCCGGCAGGGGCGTCTACTCCAA
CCCGGACTTGGTGTTCGCTGAGGCGGTCTCGCACCCGCCCAACCCCGCCGTGCCAGTGCACCCG
GTGCCGCCGCCGCACGCCCTGGCCGCCCACCCCCTGCCCTCCTCGCACTCGCCACACCCCCTCT
TCGCCTCGCAGCAGCGGGACCCGTCCACCTTCTACCCCTGGCTCATCCACCGCTACCGATATCT
GGGCCACCGCTTCCAAGGGAATGACACAAGCCCAGAGAGCTTCCTTTTGCACAACGCGCTGGCC
CGAAAGCCGAAGCGGATCAGAACCGCCTTTTCCCCGTCCCAGCTTCTGAGGCTGGAACACGCCT
TCGAGAAGAACCACTACGTGGTGGGCGCCGAGAGGAAGCAGCTGGCGCATAGCCTCAGCCTCAC
GGAAACTCAGGTAAAAGTATGGTTTCAGAACCGAAGGACGAAGTTCAAAAGGCAGAAGCTGGAG
GAAGAAGGCTCAGATTCTCAACAAAAGAAAAAAGGGACGCACCATATTAACCGGTGGAGAATCG
CCACTAAGCAGGCGAGTCCGGAGGAAATAGATGTGACCTCAGACGATTAAAAACAAACAGAACC
CCACGAAACGGACAACACGGAGCAAAACAGAGACAGGGATAGGAGGGGAAGAAGAAAAAAAGAA
AAACCACACAACCCTACAAAACAAAAACAAACCGCACACACACATTCACCGAGAAGGGGACAGG
GAGTCAGAGGAGCGGCGCGTCGCAGACGTGGGGCAGCCAGAGCGCAGGGTCCTGATCCGAGGCC
GCGCAGAGATGGCAGAGGAAGGAGGCTCCTTGATGAACATGCAACCCTTGTCTAAAGAGGCAGC
TGAGTGAGTGAATGAGACAGTGAGAGTGAGAGAGAGAGAGAGAGGGGGAGAGAGGGAGAGAGAT
CCAAAGGTGGCAAAGCCGAAGGGCTCTGACAAGGGGAGCTGTCAGTCAAACGCCAAACCAGCGA
GACAAGATGATTGGCAGGTATTCCGTTTATCGCAGTCCGATGTTTTTTTTTAATGATGATGATA
ATGATGGTGATAAAAGAAAAAACTCAACCAGGCACAGGACTTTATTTTGCACTTCGAGTGTTTT
TTTCCCCCAATCTTTAAAAATAATTAGTAATCTTAACAATCGAAATTCCATATCCAGCCCCATC
CCACACCTTTTCAAAAACTTGAATTGCATGTAGCAGTTGTTGGGCGAATGGTGTCTAAAGAGTC
TAAAGACAGAAAATGAATTGTCATATGCTTTTCCTTTTAAAGACAGGTTCTGCGTGTTCTTATT
TTGGTTTTTTTCCGAAACGTGCAGTCTGTAAACACTTTTTGATACCTTCTGACTGTCAAAGTGA
TTGTGAAAGCTAAATGAAGTAGGCTCAGCGATAGTGGTCCTCTTACAGAGAACCGGGGAGCAGG
ATGGGGGGCTGGGGGTGGCGGGGGAGGGTGCCCACAAGAGGAGTCAGGACTTGTGCTGGAAAAA
AAAAAACCCTAAATTAATTATATTTCTTGGACATTCCCTTTCCTAACATCCCGAGGCTTAAACC
CACGAAGTAAACTTCTCCTTTTAGTGGTTGGAGATATCGGCCGAGTTCAACCATTTGCCATAAG
GGCCATTTCAAACTTTAAATATATCTATTGCAAAAACCGAAGGACTGTAGTTAGCGGGGATGAT
AAGTTATGGCCAAGGACACGGCGGCAAGTTTTCAAGCACTGAGTTTCTATTCCAAGATCATAGA
CTTACTAAAGAGAGTGACAAATGCTTCCTTAATGTCTTCTATACCAGAATGTAAATATTTTTGT
GTTTCGTGTTAATTTGTTAGAATTCTAACACACTATATACTTCCAAGAAGTATGTCAATGTCAA
TATTTTGTCAATAAAGATTTATCAATATGCCCTC

hide sequence

RefSeq Acc Id:

XM_021073408 ⟹ XP_020929067

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	127,649,675 - 127,655,580 (+)	NCBI

Sequence:

show sequence

CGTGCTCCCGGGGCGATCCCAGGTCCTCTGATGCCGGGCCGCGGGGGGCAGTAGCAGAGGAGAG
CTACGCACAAGAAATCTGTGTCACTGTGTCCATCTGTCCCACCAGCTTGGGCTCAGCAGGTTCA
GGATCCAGGGGATCGCAGCGGAGGCCGCGCCGGCTGGGGACTCTGCAAGGACCGGGGTGCCCCG
GAGGGAGTGGTGTTGGTGGTGGAAAAGGAGGCGGTGGCTGAGGGGGAGGAGGTGGGGAAAGAGG
AGGAGGAGAAGAAGGAGGAAGAGGAGGAGGAGGAGGAGAAGAAGCCGAAGGAAGAGGAGGAGGC
GAAAGAGGAGAAGAAGCCGCAGCGGGCGCCGCAGGAGCGAGTGAGCTAGGAGCGCGGGGTTACG
GCGCGAAGAGGCCAGGCGGCCCGGCGGGCGCAGGAGGTTCGGCCAAGGCAGCGGCGCCGACTCC
GTTCCACTCTCGGCCCGGATCCAGGCCTCCGGGTTCCCAGGCGCTCGCCTCCCTCTGACGCACT
TTAAAGAGTCTCCCCCCTTCCACCTCAGGGCGAGTAATAGCGACCAATCATCAAGCCATTTACC
AGGCTTCGGAGGAAGCTGTTTATGTGATCCCCGCACTAATTAGGCTCATGAACTAACAAATCGT
TTGCACAACTTGTGAAGAAGCGAACACTTCCATGGATTGTCCTTGGACTTAGGGCGCCCTGCCC
GCCTTTTGCAGAGGAGAGAAAACTTTTTTTTTTGCCTCCCCCGAGAAACTCCCCCCCCCGCGCG
CCTCTAACTCCGATCCCCCCACGCCATCTCGCCCCCCCCCAAAAAAAATTACCCCAATCCACGC
CTGCAAATTCTTCTGGAAGGATTTTTCCTCCTCTCTCCAGGTTGGGCGCGTTTGGTGCAAGATT
CTCGGGATCCACGGCGTTCTCTCTCCCTCCCCCTCCCCCTCCTTTCCTTTTTCCTTTCCTTTCC
TTTCTTTCTTCCTTTCCTCCCCCCACCCCCACCCCCAACAAACAAGTCCCCAATTCCCGTCCGT
CCTTGCCGCGGGCAGCGGACAGCGGGCGGCGGAGGCAGCGCGCCGCGGTCGCCGGGAGCCGGGA
GCCCCGGGCGCCCGCTCCTCGGCACAGCATGTTCCAGCCGGCGCCCAAGCGCTGCTTCACCATC
GAGTCGCTGGTGGCCAAGGACAGTCCCCTGCCCGCCTCGCGCTCCGAGGACCCCATCCGTCCCG
CGGCGCTCAGCTACGCCAACTCCAGCCCCATAAACCCGTTCCTCAACGGCTTCCACTCGGCCGC
CGCCGCCGCCGCCGGCAGGGGCGTCTACTCCAACCCGGACTTGGTGTTCGCTGAGGCGGTCTCG
CACCCGCCCAACCCCGCCGTGCCAGTGCACCCGGTGCCGCCGCCGCACGCCCTGGCCGCCCACC
CCCTGCCCTCCTCGCACTCGCCACACCCCCTCTTCGCCTCGCAGCAGCGGGACCCGTCCACCTT
CTACCCCTGGCTCATCCACCGCTACCGATATCTGGGCCACCGCTTCCAAGGTAAAAGTATGGTT
TCAGAACCGAAGGACGAAGTTCAAAAGGCAGAAGCTGGAGGAAGAAGGCTCAGATTCTCAACAA
AAGAAAAAAGGGACGCACCATATTAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005671546	(Get FASTA)	NCBI Sequence Viewer
	XP_020929067	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000042074
	ENSSSCP00000042074.1
	ENSSSCP00015007507.1
	ENSSSCP00025014349.1
	ENSSSCP00030030869.1
	ENSSSCP00035047280.1
	ENSSSCP00040025570.1
	ENSSSCP00045003354.1
	ENSSSCP00045003364.1
	ENSSSCP00050040923.1
	ENSSSCP00050040924.1
	ENSSSCP00055033069.1
	ENSSSCP00055033116.1
	ENSSSCP00060015884.1
	ENSSSCP00065037067.1
	ENSSSCP00065037071.1
	ENSSSCP00070007454.1

RefSeq Acc Id:	XP_020929067 ⟸ XM_021073408
- Peptide Label:	isoform X2
- Sequence:	show sequence MFQPAPKRCFTIESLVAKDSPLPASRSEDPIRPAALSYANSSPINPFLNGFHSAAAAAAGRGVY SNPDLVFAEAVSHPPNPAVPVHPVPPPHALAAHPLPSSHSPHPLFASQQRDPSTFYPWLIHRYR YLGHRFQGKSMVSEPKDEVQKAEAGGRRLRFSTKEKRDAPY hide sequence

RefSeq Acc Id:	XP_005671546 ⟸ XM_005671489
- Peptide Label:	isoform X1
- UniProtKB:	A0A287ADM1 (UniProtKB/TrEMBL), A0A4X1SY58 (UniProtKB/TrEMBL), A0A8D0RD75 (UniProtKB/TrEMBL)
- Sequence:	show sequence MFQPAPKRCFTIESLVAKDSPLPASRSEDPIRPAALSYANSSPINPFLNGFHSAAAAAAGRGVY SNPDLVFAEAVSHPPNPAVPVHPVPPPHALAAHPLPSSHSPHPLFASQQRDPSTFYPWLIHRYR YLGHRFQGNDTSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLS LTETQVKVWFQNRRTKFKRQKLEEEGSDSQQKKKGTHHINRWRIATKQASPEEIDVTSDD hide sequence

Ensembl Acc Id:

ENSSSCP00000042074 ⟸ ENSSSCT00000049708

Protein Domains

Homeobox

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000032558	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015014514	UniProtKB/TrEMBL
	ENSSSCG00025025499	UniProtKB/TrEMBL
	ENSSSCG00030048273	UniProtKB/TrEMBL
	ENSSSCG00035079728	UniProtKB/TrEMBL
	ENSSSCG00040045342	UniProtKB/TrEMBL
	ENSSSCG00045003156	UniProtKB/TrEMBL
	ENSSSCG00050069641	UniProtKB/TrEMBL
	ENSSSCG00055021166	UniProtKB/TrEMBL
	ENSSSCG00060027589	UniProtKB/TrEMBL
	ENSSSCG00065061919	UniProtKB/TrEMBL
	ENSSSCG00070004814	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000049708	ENTREZGENE
	ENSSSCT00000049708.2	UniProtKB/TrEMBL
	ENSSSCT00015019188.1	UniProtKB/TrEMBL
	ENSSSCT00025034433.1	UniProtKB/TrEMBL
	ENSSSCT00030067398.1	UniProtKB/TrEMBL
	ENSSSCT00035109030.1	UniProtKB/TrEMBL
	ENSSSCT00040060864.1	UniProtKB/TrEMBL
	ENSSSCT00045005082.1	UniProtKB/TrEMBL
	ENSSSCT00045005092.1	UniProtKB/TrEMBL
	ENSSSCT00050094984.1	UniProtKB/TrEMBL
	ENSSSCT00050094985.1	UniProtKB/TrEMBL
	ENSSSCT00055041541.1	UniProtKB/TrEMBL
	ENSSSCT00055041593.1	UniProtKB/TrEMBL
	ENSSSCT00060037341.1	UniProtKB/TrEMBL
	ENSSSCT00065084896.1	UniProtKB/TrEMBL
	ENSSSCT00065084901.1	UniProtKB/TrEMBL
	ENSSSCT00070009079.1	UniProtKB/TrEMBL
Gene3D-CATH	Homeodomain-like	UniProtKB/TrEMBL
InterPro	EMX-VAX-Noto_Homeobox_TFs	UniProtKB/TrEMBL
	Homeobox-like_sf	UniProtKB/TrEMBL
	Homeobox_CS	UniProtKB/TrEMBL
	Homeobox_dom	UniProtKB/TrEMBL
	Homeobox_metazoa	UniProtKB/TrEMBL
	HTH_motif	UniProtKB/TrEMBL
KEGG Report	ssc:100152562	UniProtKB/TrEMBL
NCBI Gene	EMX2	ENTREZGENE
PANTHER	HOMEOBOX PROTEIN EMX-RELATED	UniProtKB/TrEMBL
	HOMEOBOX PROTEIN EMX2	UniProtKB/TrEMBL
Pfam	Homeodomain	UniProtKB/TrEMBL
PRINTS	HOMEOBOX	UniProtKB/TrEMBL
	HTHREPRESSR	UniProtKB/TrEMBL
PROSITE	HOMEOBOX_1	UniProtKB/TrEMBL
	HOMEOBOX_2	UniProtKB/TrEMBL
SMART	HOX	UniProtKB/TrEMBL
Superfamily-SCOP	SSF46689	UniProtKB/TrEMBL
UniProt	A0A287ADM1	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1SY58	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0RD75	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1NRH5_PIG	UniProtKB/TrEMBL
VGNC ID	VGNC:87693	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM