ACOT7 (acyl-CoA thioesterase 7) - Rat Genome Database

Name: ACOT7
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: ACOT7 (acyl-CoA thioesterase 7) Sus scrofa

Analyze

Symbol:

ACOT7

Name:

acyl-CoA thioesterase 7

RGD ID:

14110320

Description:

ENCODES a protein that exhibits fatty acyl-CoA hydrolase activity (ortholog); identical protein binding (ortholog); INVOLVED IN fatty acid catabolic process (ortholog); ASSOCIATED WITH chromosome 1p36 deletion syndrome (ortholog); genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); neuron projection (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

cytosolic acyl coenzyme A thioester hydrolase

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ACOT7 (acyl-CoA thioesterase 7)	HGNC	EggNOG, Ensembl, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Acot7 (acyl-CoA thioesterase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Acot7 (acyl-CoA thioesterase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Acot7 (acyl-CoA thioesterase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ACOT7 (acyl-CoA thioesterase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ACOT7 (acyl-CoA thioesterase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Acot7 (acyl-CoA thioesterase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ACOT7 (acyl-CoA thioesterase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Acot7 (acyl-CoA thioesterase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	67,152,429 - 67,254,103 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	67,152,428 - 67,254,097 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	62,103,745 - 62,205,894 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

chromosome 1p36 deletion syndrome (ISO)

genetic disease (ISO)

Neurodevelopmental Disorders (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

acyl-CoA metabolic process (IEA)

coenzyme A biosynthetic process (IEA)

fatty acid catabolic process (ISO)

long-chain fatty-acyl-CoA catabolic process (IEA)

medium-chain fatty acid biosynthetic process (IEA)

medium-chain fatty-acyl-CoA catabolic process (IEA)

palmitic acid biosynthetic process (IEA)

Cellular Component

cytoplasm (ISO)

cytosol (IEA)

extracellular exosome (IEA)

mitochondrial matrix (ISO)

neuron projection (ISO)

neuronal cell body (ISO)

nucleoplasm (IEA)

Molecular Function

carboxylic ester hydrolase activity (IEA)

fatty acyl-CoA hydrolase activity (IEA,ISO)

fatty-acyl-CoA binding (IEA)

hydrolase activity (IEA)

identical protein binding (ISO)

long-chain fatty acyl-CoA binding (IEA)

long-chain fatty acyl-CoA hydrolase activity (IEA)

protein binding (ISO)

protein homodimerization activity (IEA)

thiolester hydrolase activity (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

ACOT7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	67,152,429 - 67,254,103 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	67,152,428 - 67,254,097 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	62,103,745 - 62,205,894 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ACOT7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	6,264,272 - 6,393,767 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	6,264,269 - 6,393,767 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	6,324,332 - 6,453,827 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	6,246,919 - 6,376,413 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	5,438,842 - 5,568,337 (-)	NCBI		Celera
Cytogenetic Map	1	p36.31	NCBI
HuRef	1	5,472,303 - 5,601,612 (-)	NCBI		HuRef
CHM1_1	1	6,312,939 - 6,442,400 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	5,789,916 - 5,919,409 (-)	NCBI		T2T-CHM13v2.0

Acot7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	152,258,872 - 152,356,312 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	152,262,591 - 152,356,312 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	152,178,100 - 152,271,855 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	152,178,134 - 152,271,855 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	151,552,209 - 151,645,964 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	151,021,934 - 151,115,647 (+)	NCBI		MGSCv36	mm8
Celera	4	154,464,405 - 154,558,717 (+)	NCBI		Celera
Cytogenetic Map	4	E2	NCBI
cM Map	4	82.93	NCBI

Acot7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	167,969,284 - 168,062,033 (+)	NCBI		GRCr8
mRatBN7.2	5	162,686,562 - 162,779,309 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	162,684,645 - 162,779,309 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	165,389,812 - 165,482,377 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	167,211,405 - 167,303,979 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	167,173,603 - 167,266,173 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	169,357,582 - 169,450,215 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	169,357,517 - 169,450,219 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	172,912,096 - 173,003,554 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	169,409,306 - 169,501,907 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	169,419,590 - 169,512,094 (+)	NCBI
Celera	5	160,918,240 - 161,010,763 (+)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

Acot7
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955486	6,188,102 - 6,259,110 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955486	6,188,102 - 6,258,230 (+)	NCBI	ChiLan1.0	ChiLan1.0

ACOT7
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	221,834,121 - 221,959,854 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	220,475,344 - 220,601,209 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	5,030,488 - 5,154,800 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	6,287,177 - 6,402,767 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

ACOT7
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	60,153,616 - 60,239,254 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	60,153,616 - 60,239,239 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	60,163,440 - 60,265,782 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	60,369,414 - 60,471,489 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	60,369,414 - 60,471,855 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	60,368,684 - 60,471,165 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	60,235,482 - 60,337,604 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	60,637,013 - 60,739,144 (-)	NCBI		UU_Cfam_GSD_1.0

Acot7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	30,626,783 - 30,710,871 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936623	1,112,338 - 1,191,064 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936623	1,112,021 - 1,191,190 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ACOT7
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	125,345,636 - 125,474,650 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	125,345,670 - 125,474,690 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666054	29,408,450 - 29,580,377 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Acot7
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624818	5,065,995 - 5,142,558 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624818	5,048,410 - 5,142,135 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in ACOT7
2531 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	nervous system	renal system	reproductive system	respiratory system
High
Medium	4			1	17
Low	6	2	3	4	6		3	3
Below cutoff						1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003127525	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021095251	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021095252	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000044	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK391971	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK399890	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FP102454	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01111772	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000003747 ⟹ ENSSSCP00000003661

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	6	67,152,430 - 67,253,272 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000039994 ⟹ ENSSSCP00000040023

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	6	67,152,430 - 67,254,103 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000047562 ⟹ ENSSSCP00000052442

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	6	67,152,433 - 67,234,497 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000056129 ⟹ ENSSSCP00000053348

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	6	67,152,430 - 67,254,103 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000078280 ⟹ ENSSSCP00000060537

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	6	67,152,429 - 67,245,072 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000089915 ⟹ ENSSSCP00000064432

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	6	67,152,428 - 67,228,047 (-)	Ensembl

RefSeq Acc Id:

XM_003127525 ⟹ XP_003127573

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	67,152,428 - 67,254,097 (-)	NCBI

Sequence:

show sequence

CCATGGCCCCGCCTCTCCCCTCCCCCTCCATGGCGCCACCCGGGCTCATTCATTTCGCCCCGGG
CCTGCCAGACACCTGCGTTCTCCCTCGGCCGCCCGCCTCCGCTGCTGCCGCTGCCGCCGCCGCC
GCCGCCGCAGCCAGCATGTCGGGCCCCACCGCGGATACCCCGTCCGCCATCCAGATCTGCCGGA
TCATGCGGCCCGACGACGCTAACGTGGCTGGCAATGTGCACGGAGGAACCATCCTGAAGATGAT
AGAGGAGGCTGGAGCCATCATCAGCACCCGGCACTGCAACAGTCAGGACGGGGAGCGCTGCGTG
GCCGCCCTGGCCCGGGTCGAGCGCACCGACTTCCTGTCGCCCATGTGCATCGGCGAGGTGGCGC
ACGTCAGCGCGGAGATCACCTACACGTCCAAGCACTCCGTGGAGGTCCAGGTCCACGTCATGTC
CGAGAACATCCTCACAGGTAACAAAAAGCTGACCAATAAAGCCACCCTGTGGTACGTGCCCCTG
TCGCTGAAGAATGTGGACAAGGTCCTGGAGGTGCCACCAGTCGTGTACTCCCGGCAGGAGCAGG
AGGAGGAGGGCCGCAAGCGCTACGAGGCCCAGAAGCTGGAGCGCATGGAGACCAAGGGGAGGAA
CGGGGACATCGTCCAGCCTGTCCTGAACCCAGAGCCAAACACGGTCAGCTACAGCCAGTCCAGC
TTGATCCACCTGGTGGGGCCTTCCGACTGCACCCTGCACGGCTTCGTGCACGGAGGTGTCACCA
TGAAGCTCATGGACGAGGTGGCCGGGATCGTGGCCGCACGTCACTGCAAAACCAACATCGTCAC
TGCTTCCGTGGACGCCATTAACTTCCACGACAAGATCCGAAAAGGCTGTGTCATCACCATCTCC
GGCCGCATGACCTTCACGAGCAACAAGTCCATGGAGATCGAGGTCTTGGTGGACGCTGACCCCG
TGGTGGACAACTCCCAGAAGCGCTACCGGGCCGCCAGTGCCTTCTTCACCTATGTGTCCCTGAA
CCAGGAGGGCAAGTCTCTGCCTGTGCCCCAGCTCCTGCCTGAGACTGAGGACGAGAAGAAGCGC
TTCGAGGAGGGCAAAGGGCGGTACCTGCAGATGAAGGCGAAACGGCAGGGCCAGGTGGAGCCGC
AGCCCTAGACGCCCCCCTCCTGCCGCTGGGGCCTGGAGCTGCCCCCAGTGTTTGATCGCTTAGA
GTTACCCCTTGGCCAAGAACCCCAGTCACGTTGACAGCTGGTGTTGTGTGAAGTATTGTCTCGC
AGTGTTATTTAACCTGTTATTTAATCCTGAGAACCTGTACACACCAAAGCTTTCTTTCTATCAT
TCCAGTGTAAATGCTACACGGTATTGTCCTGGCGCCCCGAGGCGCTCCCTGCGGAGTCCGGGGC
ACACACTGTACGGTGTGTAAAGAATCCAGCATCACTAATAAAGCTGCTGTTTGGCTGGA

hide sequence

RefSeq Acc Id:

XM_021095251 ⟹ XP_020950910

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	67,152,428 - 67,253,363 (-)	NCBI

Sequence:

show sequence

AGGCTGTTAACAGCAAGAACAGGAAATGCCCTTCCTCTGTAACACTGCACTGCTAGGAGGGGAG
GATGGTCGTTGAGCCCGGAAGCATCTTACACAATGGGGGCAAAGGCTTGTTCTTGTTGGGGGAC
CAGCCCTGCCTTTCTCCACCGGCACCGGCAGATCGAGGGCCTGGAGGACGCGCGGGAGATCGCG
AGCCGGCTCATTTCCGACAGGAGCGGGAGGGCAGCCTCAAGGATCATGCGGCCCGACGACGCTA
ACGTGGCTGGCAATGTGCACGGAGGAACCATCCTGAAGATGATAGAGGAGGCTGGAGCCATCAT
CAGCACCCGGCACTGCAACAGTCAGGACGGGGAGCGCTGCGTGGCCGCCCTGGCCCGGGTCGAG
CGCACCGACTTCCTGTCGCCCATGTGCATCGGCGAGGTGGCGCACGTCAGCGCGGAGATCACCT
ACACGTCCAAGCACTCCGTGGAGGTCCAGGTCCACGTCATGTCCGAGAACATCCTCACAGGTAA
CAAAAAGCTGACCAATAAAGCCACCCTGTGGTACGTGCCCCTGTCGCTGAAGAATGTGGACAAG
GTCCTGGAGGTGCCACCAGTCGTGTACTCCCGGCAGGAGCAGGAGGAGGAGGGCCGCAAGCGCT
ACGAGGCCCAGAAGCTGGAGCGCATGGAGACCAAGGGGAGGAACGGGGACATCGTCCAGCCTGT
CCTGAACCCAGAGCCAAACACGGTCAGCTACAGCCAGTCCAGCTTGATCCACCTGGTGGGGCCT
TCCGACTGCACCCTGCACGGCTTCGTGCACGGAGGTGTCACCATGAAGCTCATGGACGAGGTGG
CCGGGATCGTGGCCGCACGTCACTGCAAAACCAACATCGTCACTGCTTCCGTGGACGCCATTAA
CTTCCACGACAAGATCCGAAAAGGCTGTGTCATCACCATCTCCGGCCGCATGACCTTCACGAGC
AACAAGTCCATGGAGATCGAGGTCTTGGTGGACGCTGACCCCGTGGTGGACAACTCCCAGAAGC
GCTACCGGGCCGCCAGTGCCTTCTTCACCTATGTGTCCCTGAACCAGGAGGGCAAGTCTCTGCC
TGTGCCCCAGCTCCTGCCTGAGACTGAGGACGAGAAGAAGCGCTTCGAGGAGGGCAAAGGGCGG
TACCTGCAGATGAAGGCGAAACGGCAGGGCCAGGTGGAGCCGCAGCCCTAGACGCCCCCCTCCT
GCCGCTGGGGCCTGGAGCTGCCCCCAGTGTTTGATCGCTTAGAGTTACCCCTTGGCCAAGAACC
CCAGTCACGTTGACAGCTGGTGTTGTGTGAAGTATTGTCTCGCAGTGTTATTTAACCTGTTATT
TAATCCTGAGAACCTGTACACACCAAAGCTTTCTTTCTATCATTCCAGTGTAAATGCTACACGG
TATTGTCCTGGCGCCCCGAGGCGCTCCCTGCGGAGTCCGGGGCACACACTGTACGGTGTGTAAA
GAATCCAGCATCACTAATAAAGCTGCTGTTTGGCTGGA

hide sequence

RefSeq Acc Id:

XM_021095252 ⟹ XP_020950911

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	67,152,428 - 67,234,744 (-)	NCBI

Sequence:

show sequence

AAAAAAAAAAAAAGTCAGGTAAGAAGGTCACAGAACGTGCAGTATTTGGAGTGATGGGGTGATG
GGTGCTCCTCAGAGAGCCGCCTCTTACCTGGGGTAAGCGCTGTGCCCAGCGTGCCAGGCAGAGA
AAGAATCCAGGGTTGCTTAGGAGCAATGCCCTCGTGCGGGGACCAGGCCGAGTCCAAAGGGCCC
ACAGCCTCAGGGCCACGGCCCGCCCCATATGTCTGTGGCTTTGGGAGGGACCAGTGGAGACTGC
GGAGCCCATGCTCTTGGTCCGGCGAGCTGTGGCCCTGGGCGCCCTCAGGAAGGCGGCCAGCGAG
GCCTCTCTTAGGGAGAAGGCCAAGCTGATCATGCGGCCCGACGACGCTAACGTGGCTGGCAATG
TGCACGGAGGAACCATCCTGAAGATGATAGAGGAGGCTGGAGCCATCATCAGCACCCGGCACTG
CAACAGTCAGGACGGGGAGCGCTGCGTGGCCGCCCTGGCCCGGGTCGAGCGCACCGACTTCCTG
TCGCCCATGTGCATCGGCGAGGTGGCGCACGTCAGCGCGGAGATCACCTACACGTCCAAGCACT
CCGTGGAGGTCCAGGTCCACGTCATGTCCGAGAACATCCTCACAGGTAACAAAAAGCTGACCAA
TAAAGCCACCCTGTGGTACGTGCCCCTGTCGCTGAAGAATGTGGACAAGGTCCTGGAGGTGCCA
CCAGTCGTGTACTCCCGGCAGGAGCAGGAGGAGGAGGGCCGCAAGCGCTACGAGGCCCAGAAGC
TGGAGCGCATGGAGACCAAGGGGAGGAACGGGGACATCGTCCAGCCTGTCCTGAACCCAGAGCC
AAACACGGTCAGCTACAGCCAGTCCAGCTTGATCCACCTGGTGGGGCCTTCCGACTGCACCCTG
CACGGCTTCGTGCACGGAGGTGTCACCATGAAGCTCATGGACGAGGTGGCCGGGATCGTGGCCG
CACGTCACTGCAAAACCAACATCGTCACTGCTTCCGTGGACGCCATTAACTTCCACGACAAGAT
CCGAAAAGGCTGTGTCATCACCATCTCCGGCCGCATGACCTTCACGAGCAACAAGTCCATGGAG
ATCGAGGTCTTGGTGGACGCTGACCCCGTGGTGGACAACTCCCAGAAGCGCTACCGGGCCGCCA
GTGCCTTCTTCACCTATGTGTCCCTGAACCAGGAGGGCAAGTCTCTGCCTGTGCCCCAGCTCCT
GCCTGAGACTGAGGACGAGAAGAAGCGCTTCGAGGAGGGCAAAGGGCGGTACCTGCAGATGAAG
GCGAAACGGCAGGGCCAGGTGGAGCCGCAGCCCTAGACGCCCCCCTCCTGCCGCTGGGGCCTGG
AGCTGCCCCCAGTGTTTGATCGCTTAGAGTTACCCCTTGGCCAAGAACCCCAGTCACGTTGACA
GCTGGTGTTGTGTGAAGTATTGTCTCGCAGTGTTATTTAACCTGTTATTTAATCCTGAGAACCT
GTACACACCAAAGCTTTCTTTCTATCATTCCAGTGTAAATGCTACACGGTATTGTCCTGGCGCC
CCGAGGCGCTCCCTGCGGAGTCCGGGGCACACACTGTACGGTGTGTAAAGAATCCAGCATCACT
AATAAAGCTGCTGTTTGGCTGGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_003127573	(Get FASTA)	NCBI Sequence Viewer
	XP_020950910	(Get FASTA)	NCBI Sequence Viewer
	XP_020950911	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000003661
	ENSSSCP00000003661.3
	ENSSSCP00000040023.1
	ENSSSCP00000052442
	ENSSSCP00000052442.2
	ENSSSCP00000053348
	ENSSSCP00000053348.1
	ENSSSCP00000060537.2
	ENSSSCP00015042366.1
	ENSSSCP00015042536.1
	ENSSSCP00025048193.1
	ENSSSCP00025048195.1
	ENSSSCP00025048199.1
	ENSSSCP00025048209.1
	ENSSSCP00025048217.1
	ENSSSCP00025048223.1
	ENSSSCP00030047117.1
	ENSSSCP00030047126.1
	ENSSSCP00030047137.1
	ENSSSCP00030047154.1
	ENSSSCP00030047177.1
	ENSSSCP00030047190.1
	ENSSSCP00035001346.1
	ENSSSCP00035001347.1
	ENSSSCP00035001348.1
	ENSSSCP00035001351.1
	ENSSSCP00035001353.1
	ENSSSCP00035001354.1
	ENSSSCP00040019561.1
	ENSSSCP00040019581.1
	ENSSSCP00040019593.1
	ENSSSCP00040019608.1
	ENSSSCP00040019616.1
	ENSSSCP00040019631.1
	ENSSSCP00045024813.1
	ENSSSCP00045024864.1
	ENSSSCP00045024905.1
	ENSSSCP00045025013.1
	ENSSSCP00045025092.1
	ENSSSCP00045025154.1
	ENSSSCP00050037408.1
	ENSSSCP00050037437.1
	ENSSSCP00055006364.1
	ENSSSCP00055006374.1
	ENSSSCP00055006380.1
	ENSSSCP00055006397.1
	ENSSSCP00055006406.1
	ENSSSCP00055006416.1
	ENSSSCP00055006426.1
	ENSSSCP00060025166.1
	ENSSSCP00060025169.1
	ENSSSCP00060025172.1
	ENSSSCP00060025176.1
	ENSSSCP00060025181.1
	ENSSSCP00060025185.1
	ENSSSCP00065036264.1
	ENSSSCP00065036271.1
	ENSSSCP00065036274.1
	ENSSSCP00070050601.1
	ENSSSCP00070050602.1
	ENSSSCP00070050603.1
	ENSSSCP00070050604.1
	ENSSSCP00070050605.1
	ENSSSCP00070050606.1

RefSeq Acc Id:	XP_003127573 ⟸ XM_003127525
- Peptide Label:	isoform X1
- UniProtKB:	A0A287BB59 (UniProtKB/TrEMBL), A0A8D1ZR16 (UniProtKB/TrEMBL), A0A4X1W8W3 (UniProtKB/TrEMBL), A0A8D1ED90 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAPPLPSPSMAPPGLIHFAPGLPDTCVLPRPPASAAAAAAAAAAAASMSGPTADTPSAIQICRI MRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNSQDGERCVAALARVERTDFLSPMCIGEVAH VSAEITYTSKHSVEVQVHVMSENILTGNKKLTNKATLWYVPLSLKNVDKVLEVPPVVYSRQEQE EEGRKRYEAQKLERMETKGRNGDIVQPVLNPEPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTM KLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPV VDNSQKRYRAASAFFTYVSLNQEGKSLPVPQLLPETEDEKKRFEEGKGRYLQMKAKRQGQVEPQ P hide sequence

RefSeq Acc Id:	XP_020950910 ⟸ XM_021095251
- Peptide Label:	isoform X2
- UniProtKB:	A0A8D1ZFN5 (UniProtKB/TrEMBL), F1RIK3 (UniProtKB/TrEMBL), A0A4X1W9Y3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGAKACSCWGTSPAFLHRHRQIEGLEDAREIASRLISDRSGRAASRIMRPDDANVAGNVHGGTI LKMIEEAGAIISTRHCNSQDGERCVAALARVERTDFLSPMCIGEVAHVSAEITYTSKHSVEVQV HVMSENILTGNKKLTNKATLWYVPLSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLERMET KGRNGDIVQPVLNPEPNTVSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKT NIVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVVDNSQKRYRAASAFFTY VSLNQEGKSLPVPQLLPETEDEKKRFEEGKGRYLQMKAKRQGQVEPQP hide sequence

RefSeq Acc Id:	XP_020950911 ⟸ XM_021095252
- Peptide Label:	isoform X3
- UniProtKB:	A0A8D2CD07 (UniProtKB/TrEMBL), A0A287B8N7 (UniProtKB/TrEMBL), A0A4X1W2X5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLLVRRAVALGALRKAASEASLREKAKLIMRPDDANVAGNVHGGTILKMIEEAGAIISTRHCNS QDGERCVAALARVERTDFLSPMCIGEVAHVSAEITYTSKHSVEVQVHVMSENILTGNKKLTNKA TLWYVPLSLKNVDKVLEVPPVVYSRQEQEEEGRKRYEAQKLERMETKGRNGDIVQPVLNPEPNT VSYSQSSLIHLVGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRK GCVITISGRMTFTSNKSMEIEVLVDADPVVDNSQKRYRAASAFFTYVSLNQEGKSLPVPQLLPE TEDEKKRFEEGKGRYLQMKAKRQGQVEPQP hide sequence

RefSeq Acc Id:

ENSSSCP00000060537 ⟸ ENSSSCT00000078280

RefSeq Acc Id:

ENSSSCP00000040023 ⟸ ENSSSCT00000039994

RefSeq Acc Id:

ENSSSCP00000064432 ⟸ ENSSSCT00000089915

RefSeq Acc Id:

ENSSSCP00000003661 ⟸ ENSSSCT00000003747

RefSeq Acc Id:

ENSSSCP00000053348 ⟸ ENSSSCT00000056129

RefSeq Acc Id:

ENSSSCP00000052442 ⟸ ENSSSCT00000047562

Protein Domains

HotDog ACOT-type

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000003377	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015075581	UniProtKB/TrEMBL
	ENSSSCG00025077107	UniProtKB/TrEMBL
	ENSSSCG00030072888	UniProtKB/TrEMBL
	ENSSSCG00035003235	UniProtKB/TrEMBL
	ENSSSCG00040032117	UniProtKB/TrEMBL
	ENSSSCG00045020886	UniProtKB/TrEMBL
	ENSSSCG00050064050	UniProtKB/TrEMBL
	ENSSSCG00055004079	UniProtKB/TrEMBL
	ENSSSCG00060043347	UniProtKB/TrEMBL
	ENSSSCG00065060701	UniProtKB/TrEMBL
	ENSSSCG00070029563	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000003747	ENTREZGENE
	ENSSSCT00000003747.3	UniProtKB/TrEMBL
	ENSSSCT00000039994.2	UniProtKB/TrEMBL
	ENSSSCT00000047562	ENTREZGENE
	ENSSSCT00000047562.2	UniProtKB/TrEMBL
	ENSSSCT00000056129	ENTREZGENE
	ENSSSCT00000056129.2	UniProtKB/TrEMBL
	ENSSSCT00000078280.2	UniProtKB/TrEMBL
	ENSSSCT00015102178.1	UniProtKB/TrEMBL
	ENSSSCT00015102444.1	UniProtKB/TrEMBL
	ENSSSCT00025107050.1	UniProtKB/TrEMBL
	ENSSSCT00025107053.1	UniProtKB/TrEMBL
	ENSSSCT00025107058.1	UniProtKB/TrEMBL
	ENSSSCT00025107071.1	UniProtKB/TrEMBL
	ENSSSCT00025107081.1	UniProtKB/TrEMBL
	ENSSSCT00025107088.1	UniProtKB/TrEMBL
	ENSSSCT00030102107.1	UniProtKB/TrEMBL
	ENSSSCT00030102134.1	UniProtKB/TrEMBL
	ENSSSCT00030102157.1	UniProtKB/TrEMBL
	ENSSSCT00030102201.1	UniProtKB/TrEMBL
	ENSSSCT00030102249.1	UniProtKB/TrEMBL
	ENSSSCT00030102280.1	UniProtKB/TrEMBL
	ENSSSCT00035004001.1	UniProtKB/TrEMBL
	ENSSSCT00035004004.1	UniProtKB/TrEMBL
	ENSSSCT00035004005.1	UniProtKB/TrEMBL
	ENSSSCT00035004012.1	UniProtKB/TrEMBL
	ENSSSCT00035004018.1	UniProtKB/TrEMBL
	ENSSSCT00035004020.1	UniProtKB/TrEMBL
	ENSSSCT00040046664.1	UniProtKB/TrEMBL
	ENSSSCT00040046718.1	UniProtKB/TrEMBL
	ENSSSCT00040046746.1	UniProtKB/TrEMBL
	ENSSSCT00040046770.1	UniProtKB/TrEMBL
	ENSSSCT00040046786.1	UniProtKB/TrEMBL
	ENSSSCT00040046823.1	UniProtKB/TrEMBL
	ENSSSCT00045035701.1	UniProtKB/TrEMBL
	ENSSSCT00045035764.1	UniProtKB/TrEMBL
	ENSSSCT00045035814.1	UniProtKB/TrEMBL
	ENSSSCT00045035970.1	UniProtKB/TrEMBL
	ENSSSCT00045036082.1	UniProtKB/TrEMBL
	ENSSSCT00045036167.1	UniProtKB/TrEMBL
	ENSSSCT00050087212.1	UniProtKB/TrEMBL
	ENSSSCT00050087275.1	UniProtKB/TrEMBL
	ENSSSCT00055008040.1	UniProtKB/TrEMBL
	ENSSSCT00055008051.1	UniProtKB/TrEMBL
	ENSSSCT00055008059.1	UniProtKB/TrEMBL
	ENSSSCT00055008079.1	UniProtKB/TrEMBL
	ENSSSCT00055008088.1	UniProtKB/TrEMBL
	ENSSSCT00055008101.1	UniProtKB/TrEMBL
	ENSSSCT00055008121.1	UniProtKB/TrEMBL
	ENSSSCT00060058785.1	UniProtKB/TrEMBL
	ENSSSCT00060058788.1	UniProtKB/TrEMBL
	ENSSSCT00060058795.1	UniProtKB/TrEMBL
	ENSSSCT00060058806.1	UniProtKB/TrEMBL
	ENSSSCT00060058814.1	UniProtKB/TrEMBL
	ENSSSCT00060058821.1	UniProtKB/TrEMBL
	ENSSSCT00065083206.1	UniProtKB/TrEMBL
	ENSSSCT00065083217.1	UniProtKB/TrEMBL
	ENSSSCT00065083223.1	UniProtKB/TrEMBL
	ENSSSCT00070059422.1	UniProtKB/TrEMBL
	ENSSSCT00070059423.1	UniProtKB/TrEMBL
	ENSSSCT00070059424.1	UniProtKB/TrEMBL
	ENSSSCT00070059425.1	UniProtKB/TrEMBL
	ENSSSCT00070059426.1	UniProtKB/TrEMBL
	ENSSSCT00070059427.1	UniProtKB/TrEMBL
Gene3D-CATH	Hotdog Thioesterase	UniProtKB/TrEMBL
InterPro	Cytosol_ACT	UniProtKB/TrEMBL
	HOTDOG_ACOT	UniProtKB/TrEMBL
	HotDog_dom_sf	UniProtKB/TrEMBL
	Thioestr_dom	UniProtKB/TrEMBL
KEGG Report	ssc:100514773	UniProtKB/TrEMBL
NCBI Gene	ACOT7	ENTREZGENE
PANTHER	CYTOSOLIC ACYL COENZYME A THIOESTER HYDROLASE	UniProtKB/TrEMBL
	PTHR11049	UniProtKB/TrEMBL
Pfam	4HBT	UniProtKB/TrEMBL
PROSITE	HOTDOG_ACOT	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54637	UniProtKB/TrEMBL
UniProt	A0A287A7V2_PIG	UniProtKB/TrEMBL
	A0A287B8N7	ENTREZGENE, UniProtKB/TrEMBL
	A0A287BB59	ENTREZGENE, UniProtKB/TrEMBL
	A0A480UHI4_PIG	UniProtKB/TrEMBL
	A0A4X1W2X0_PIG	UniProtKB/TrEMBL
	A0A4X1W2X5	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1W835_PIG	UniProtKB/TrEMBL
	A0A4X1W8L5_PIG	UniProtKB/TrEMBL
	A0A4X1W8W3	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1W9Y3	ENTREZGENE, UniProtKB/TrEMBL
	A0A5G2Q9C4_PIG	UniProtKB/TrEMBL
	A0A8D0Q1U4_PIG	UniProtKB/TrEMBL
	A0A8D0Y742_PIG	UniProtKB/TrEMBL
	A0A8D1E9U5_PIG	UniProtKB/TrEMBL
	A0A8D1ED90	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1EDA0_PIG	UniProtKB/TrEMBL
	A0A8D1K9S1_PIG	UniProtKB/TrEMBL
	A0A8D1NB23_PIG	UniProtKB/TrEMBL
	A0A8D1VJQ5_PIG	UniProtKB/TrEMBL
	A0A8D1VKK3_PIG	UniProtKB/TrEMBL
	A0A8D1VKY1_PIG	UniProtKB/TrEMBL
	A0A8D1ZFN5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1ZR16	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D2CD07	ENTREZGENE, UniProtKB/TrEMBL
	F1RIK3	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:96893	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar