YPEL1 (yippee like 1) - Rat Genome Database

Name: YPEL1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: YPEL1 (yippee like 1) Sus scrofa

Analyze

Symbol:

YPEL1

Name:

yippee like 1

RGD ID:

14101401

Description:

ASSOCIATED WITH chromosome 22q11.2 deletion syndrome, distal (ortholog); COVID-19 (ortholog); DiGeorge syndrome (ortholog); INTERACTS WITH deoxynivalenol

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

protein yippee-like 1

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	YPEL1 (yippee like 1)	HGNC	Ensembl, NCBI, OrthoDB
Mus musculus (house mouse):	Ypel1 (yippee like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Ypel1 (yippee-like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ypel1 (yippee like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	YPEL1 (yippee like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	YPEL1 (yippee like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ypel1 (yippee like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	YPEL1 (yippee like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ypel1 (yippee like 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	YPEL3 (yippee like 3)	HGNC	OrthoDB

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	50,190,798 - 50,208,256 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	50,190,641 - 50,208,732 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	53,641,158 - 53,656,696 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

chromosome 22q11.2 deletion syndrome, distal (ISO)

COVID-19 (ISO)

DiGeorge syndrome (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

deoxynivalenol (EXP)

References

Genomics

Comparative Map Data

YPEL1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	50,190,798 - 50,208,256 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	50,190,641 - 50,208,732 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	53,641,158 - 53,656,696 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

YPEL1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	22	21,697,536 - 21,735,794 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	22	21,697,536 - 21,735,794 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	22	22,051,825 - 22,090,083 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	22	20,381,825 - 20,420,071 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	22	20,376,381 - 20,414,625	NCBI
Celera	22	5,869,356 - 5,907,602 (-)	NCBI		Celera
Cytogenetic Map	22	q11.21-q11.22	NCBI
HuRef	22	5,009,474 - 5,047,359 (-)	NCBI		HuRef
CHM1_1	22	22,052,019 - 22,090,249 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	22	22,111,014 - 22,149,275 (-)	NCBI		T2T-CHM13v2.0

Ypel1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	16,887,454 - 16,904,912 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	16,887,560 - 16,904,909 (+)	Ensembl		GRCm39 Ensembl
GRCm38	16	17,070,139 - 17,087,048 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	17,069,696 - 17,087,045 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	16	17,070,404 - 17,086,781 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	16	16,983,874 - 17,000,251 (+)	NCBI		MGSCv36	mm8
Celera	16	17,643,100 - 17,659,477 (+)	NCBI		Celera
Cytogenetic Map	16	A3	NCBI
cM Map	16	10.58	NCBI

Ypel1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	97,426,012 - 97,440,646 (-)	NCBI		GRCr8
mRatBN7.2	11	83,921,799 - 83,936,409 (-)	NCBI	mRatBN7.2	mRatBN7.2
Rnor_6.0	11	88,171,401 - 88,186,000 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	88,173,890 - 88,180,542 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	91,224,741 - 91,238,647 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	85,929,479 - 85,936,364 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	11	82,677,482 - 82,692,081 (-)	NCBI		Celera
Cytogenetic Map	11	q23	NCBI

Ypel1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955442	17,400,655 - 17,423,896 (+)	NCBI	ChiLan1.0	ChiLan1.0

YPEL1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	23	31,242,950 - 31,281,211 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	22	33,791,680 - 33,829,957 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	22	3,820,354 - 3,858,632 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	22	20,306,577 - 20,340,767 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	22	20,306,577 - 20,340,773 (-)	Ensembl	panpan1.1		panPan2

YPEL1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	26	30,967,997 - 30,992,111 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	26	30,968,334 - 30,992,334 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	26	30,925,222 - 30,949,224 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	26	32,373,733 - 32,398,278 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	26	32,371,581 - 32,398,278 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	26	30,420,895 - 30,446,850 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	26	30,044,434 - 30,070,539 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	26	31,134,454 - 31,161,039 (-)	NCBI		UU_Cfam_GSD_1.0

Ypel1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	140,769,878 - 140,795,692 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936619	1,958,370 - 1,981,350 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936619	1,958,370 - 1,984,182 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

YPEL1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	19	4,378,483 - 4,409,498 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	19	4,400,451 - 4,409,228 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666085	2,589,654 - 2,623,792 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ypel1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624747	1,248,026 - 1,274,869 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624747	1,248,026 - 1,274,909 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in YPEL1
210 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium						9
Low	7	3	3	5	2	14	2	3	1
Below cutoff	3	1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003132989	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021072282	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021072284	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000096	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU633431	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01068411	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000060428 ⟹ ENSSSCP00000044178

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	14	50,190,642 - 50,206,328 (+)	Ensembl

RefSeq Acc Id:

ENSSSCT00000101115 ⟹ ENSSSCP00000081262

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	14	50,190,798 - 50,208,256 (+)	Ensembl

RefSeq Acc Id:

XM_003132989 ⟹ XP_003133037

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	50,190,641 - 50,208,732 (+)	NCBI

Sequence:

show sequence

CAAAACAAAGGGCAGGCGGCCCGCGGGCGGCGGCGGCGGGGATGTCTCGCGCGCGGCCCAGGCG
CCAACCGCCGCAGCGCGTCCCGGGCCGCGCCGGGCCCTCCGGAGAGCCGCGCCCGCGCTGAGCG
AGGCCGTGCCGATGGGCGCTGCGGGCCGGGGCGCGGACCGGCGGGCGGCCGTTGTGGCGTTTTT
CTCTCACCCCAGCGGTGTGGACAGAGCCACACACCCTCTGACCAACAACGGCTCTTGCGTGCGT
GCTGCAGTGTTTCTTCTGTCAGAGAGCCCAGCAGAGCTGCAGTTCCTCCCGTGCCAGCCCTGAG
CTGAGCGAGGCGTGTCCAGTGGAGATGGTGAAGATGACAAAGTCCAAAACTTTCCAAGCCTACC
TGCCAAATTGCCATCGAACGTACAGCTGTGTCCACTGCAGAGCCCATCTGGCCAATCACGACGA
GCTGATCTCCAAGTCCTTTCAGGGGAGTCAGGGCCGAGCCTACCTCTTCAATTCTGTGGTGAAT
GTGGGTTGCGGCCCTGCGGAGGAGCGGGTCCTTCTCACCGGCCTGCACGCCGTGGCGGACATCT
ACTGCGAGAACTGCAAGACCACACTTGGGTGGAAATATGAACATGCCTTTGAAAGCAGTCAGAA
ATATAAGGAAGGAAAATTTATCATTGAGCTTGCTCACATGATCAAAGACAATGGTTGGGAGTAA
AGTGGAAACTTCCTGTTCCCTTTTGAATCCTATTTTCTGAAAGACGGTAAATGCAATGGGAACC
TCTGGGTGACAGTATTTCTTGACCTTGAGCCTCGAAGGCTGGCCTCTATGGCCCATCCTGTGGG
TAAGGTGTCCCTCCCGTCTGTGTCCTCTTCACGTACACAGTTGTTTCTGAGATGTTTCAATGAC
TTTTTTTTAACTTCTCAAGATCAAGCGAAAGACTTAACTGACTGATGACTTGCCCATCTAGTTA
ATACCTTCTTTTAACCAATGCCTTTATGGTAGTGTCTGGCCATGCTCTTTCATACTCATAGAAG
ACCAAACCCCACCTCTAGAGACCACAGGCAGGGTAGCTTCAGAGGGCCAGTCTCCCCTCTTGTT
TGGGGTGAAGGTATGAGAGCCACTCCCTCCCCAGTTCGCAGGACACATGGGTTGTTCCTCTGAC
AGATGATCTGTGAGGGCCGTGCTGACTTAGGATTCTTCTGGAAGCAGTCTATGAATCTATGCAC
CAAGGGTGTTTTTTAGGAGGACACCACTGATAGCATTTTAGATAAGCTATAAATAGAGAAATGT
GTCTAATGGATCATCTTGTTTATTGAAGCCACTGGCTCCTTAATCTAGAAAGTGAGCGAAGGAG
TCATTAGCAAAGTTGGACCCTGGCAGGCTCCACTGGGGACTCCATGTGGGGCACTGAGCAGCTG
GCTGGTCCATGGCTTACAGTTTAAAGCACTGGACCAAGTAAAATTGGATTTCCTTTCCTGCTCC
GATGTACTTGAAGATTTTTTTTTTTTTTTTTTTTTTGCATATGAAAGAGGCCAAAACAGGACAA
ACTCACAAACTTAAGATTTGCCAGTTTGTTTGAAAAGTTTTTCAGAAAAGGATAAGTTGCAAGA
CAGGTTTAAGCTCTGAAGACATTTTGTCCCGTCAGCTGACAGATGGGGTCCAGCAGCCTCCCAA
GTCCTGCATTTTTGCCTCACATTCAAGTTCCGACCCACCCATGCCTCAGCAGGGCGTGGGCACT
GCACAGGGGTTTTGGCATTTTGCAGAGAAGGGAGGCCAAAAAGCATTCCTAATTTTGGTTTTCA
GTGTCAACCTGGCCCGCCACTCTTGGCGTCTTGGGGTCTTCAGTGTCGTCACTGTGGCATGAGA
CCCCGGGACCCCAGGCCAAGGGACAGGAAGAGCCAGGGACAGGGAAAGAGGAGGGCAGCGGGCC
AGCTCTGAAGCTCCCTTAGACAAAGCTGGTCCCATGGCCACAAGCTGGAGCTAGTTGGGGATGG
AGCAGGCACTGTCAACCGGTCAGAAAAGGCCCCTCCCCGACCCCAGCCTACCCTGGGTCCCAAG
TCCCCGCTGGTACATCAGGATCCTGGGGGTCTGGCCCAGCCACTCACCTAGGCTTCCCTTTGGC
ACTCCATCTACGACTCGCAGCCTGGCTGTCCTGAGTGCAGGGTTGTCCATGCTGTGCCCAGCAG
GCCTGGATGCATTTCGAGGTGCCGAGGAAGTGCTCAGCCCAGCTAGGCCTCCAGCTGCAGGAGC
TCTGCTGCCCTGTGAGCTGGGCCCTGTCACCCAGGAGGCTTCAGATCTAGGGCCCCAGGAAACA
GCAGCCACCCTCAGCCTGGTCCTCAGTGAACCCTTGAAGGCCTGGCCTGCACCTGTCTGGAGGA
GTGAATATGAGTTTCTGAGCTGGCGTCTCCCTTCTCGCTGGGCTCCTCCCTGAGCCTTGGCCTG
TGGCCAGCATGCTCCCCCGAAAGATGCTCTCAGACCCCAAGGAATCTCCAGTTCCTCTGCCCGA
TCTCTGTACATACTCAGATTTATAGCTTTTGTATGTTCTGGGCACAGTCACTGCTCCTCTGACT
TGAGCACTTTGGTTTTGTACCATCTCGGTGGTGGCACTGAAGCATTTCTATCAGTGGTCCATGG
TTACTTTTGTGTTTTCATAATTGACACCAACAGAAACTCTTACCACTTTTTTTGTTGATCTTCT
GCAAAATCCAAGCTCCATTTGAAACCAAATGAATTGACCGTGAGCAGGCTTCCAGGAAGGGTAC
TCATGAGACCACAGCCAGATGTGCTAGCAAAGTGCTGGGATGTTCCACCCTCTTAAATTCCTAA
ACGGTAAATACTACCCCACGGCTTTTATTTAAATTATTTAAGATATTTTTTCCTTGAAAAGAGT
GGGAGGTGATGCCAGGATTATAAATGCATTTGTTACACTATGTAGTGTCCTCTGCACAATACAT
CTGCTTTAGAAATGTAACTTAGTTCTGTTGCTGTTTTATACAATATATATATAGTATTTTTATA
CTTTAACACTTACTCTTGATGGCATCTGTCAGATATATTAGAAAGGATCAGAAATGGGAATTGT
TTCAAAAGTCCTTTAATTTACCTGATGACCTCACCAGGGACTTACAAAATCTGAGCATTTTCAG
TATCTAGAAAACTAATCTCAGTTATACACCAACCTACAGAAATGTAAAGGCAAAGGCTCTGGGC
AGGCCTGTCCTCCCACTGTGAGCAGCACTATGGGCCTGCTGCCCAGGGGGGCCGGACTTCCCTC
AGGGCAGGTGGGCACAGCCGCTGGACAGATGGAGGGACAGAAGCCCAGGCCAGCTAGAAGGCTT
GCCTGCCGAGCGGGTCTGTGGAGCCCATGCGAAAAGCTGCCCTCGTCCCATGTCCAGCCCTCTG
TCATCTGTGTGAGGTTCAAAAATAAAGCTTCTGGCACCCAAC

hide sequence

RefSeq Acc Id:

XM_021072282 ⟹ XP_020927941

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	50,199,026 - 50,208,732 (+)	NCBI

Sequence:

show sequence

CCACGTCCTCATGGGTACTAGTCAGGTTTGTTAACTGCTGAGCCACAACAGGAACTCCTACATT
GATTTATTTTCCAGGAATTTATCTACGTTTTCAAACATATTGACCTAAATTGATCACAGCATCT
CTTCCCCATGAGTCTTGCCCACAGAAGGTGCTCTGCATTGCATTTGAATTTCTGATGGCAGCTC
AGGGTCATCATTCTTTTCCAAGAAAACAGCTTTGCCTTTTAATCCTCTCTATCGGATCTATGTT
TTCCTTTTCTGTAATATTTTTTTTCCTATTTCTTTCTTTATATTTTCTTGGGGTTGTTTTACTG
TTACTTCTCTAACTTTTTTTTTTGTCTTTTTTTTTTTTTGTCTTTTTTGCTATTTCTTGGGCAG
CTGCCGCGGCATATGGAGGCTCCCAAACTAGGGGTCCAATCGGAGCTGTAGCCACCAGCCTACG
CCAGAGCCGCAGCAACACGGGATCCGAGCCGAGTCTGCAACCTACACCACAGCTCACGGCAACG
CCGGATCCTTAACCCACTGAGCAAGGGCAGGGACCGAACCCGCAACCTCATGGTTCCTAGTCAG
ATTCGTTAACCACTGCGCCACGACGGGAACTCCCCCCCTTTTTTTTTTTAATTCCTGTTTTGTT
TGTTTTTTTTGTCTTTTTAGGGCTGCACCTATGGCATATGGAGGTTCCCAGGCTAGGGGTCAAA
TCAGAGCTGTAGTTGCCGGCCTACACAACAGTCACAGCAATGCCAGATCCAAACTCTGTCTGTA
ACCTACACCACAGCTCATGGCAACACCAGATCCTTAACCCACTGAGCCAGGCCAGGGATCGAGC
CTGCATCATAGCGAATACTGGTCAGGTTCATAACTTGCTGAGCCACAGTGGAAACTCCCTAATT
TCCATTATTCTTTAGACACATGTAGAAGTACATTTCCTAAATTCTAAACATTGGAGGATTTTTC
TAGCTATGTTTTATTATTTCTAATTTAATTGTATTGTAGTCAAGAGAATATACTGTGATTTCTG
TCCTTTAATCTGTTGATGTGTGCTGTGTGGTTGACTTTTGGATATGTCTGTGTTCACCGGACAC
TGTGGTTCTTAGATACAGTTTTCTACATGTCTTTTAGTTCCAGTTTCTTCATCATATTGTGCAA
ATCATGGGTATCTGCCCTGCTTTGTGTTGCCTATCTGTTACTGAAAGTTGCAGTAAAATATATA
CTATATATTTATATACTATGTTTTATACATGCAAATATATATTATGTGTTTATATTTGCTAAGT
ATACTGTAAATACATACATTTTTGACACATATTTTGAGACTTATGTTATCAAGTGATAAGATTT
ATACTTGCTATTTATCTCCCTGCTATTTTTATCTAATAAAGTTTTTCCCTTAAATGTAATTCCC
TAAGGGAAATATTAATTAATATAGTGTTACCTTACTTATGTATTATATATTTTTCTATCCTTTT
GCTACCTTAACTTTATGTGATTTTTTTTTTTTACTTTTTATGGCCATATCTGTGGCATATGGAG
GTTCCTGGGCTGGGGTCAAATCTGAGATGCAAACTGCTGGCCTGCGCCACAGCCACAGCAATGT
GGGATCTGAGGTGCATCTGTGACCTATGCTGCAGCTTGCAATAATGCCAGATCCTTAATCCACT
GATCAAGGCCAGGGGTCGAACTCACATCCTCATGGAGACAATGTTGGGTTCTTATTCCACTAAG
CCACAATAGGAACTCCTGATTTGTTTGTTTTTTGTTTTTTTAGGGCCACACCCACGGCATATGG
AGGTTCCCAGGCTAGGGGTCTAATCAGAGCTGTAACCGCTGGCTTACTCCACAGCCACAGCAAC
ACTGGATCTGAGCTGTGTCTGCAACCTACACCACAGCTCACGGCAACGCCGGATCCTTAACGCA
CTGAGCGAGGCCAGGGATCAAACCTCATGGTTCCTAGTCGGATTCGTTTCCGCTGCACCACGAG
GGGAACAGCATCCCCCCATTATAATTTCTCGAAGATTAATACTTTATCCATCACATACATTTGT
AAATGGCCCGGTGCTTTCAGTCACTAATTCCACGATTTGGGACAAGATATATTCAGTGCTGCTG
GCCTCACTCAGATGGGAATCTTTTTTTTTTTTTTTAATTTTATTTATTTTATTTATTTATTTTT
GTCTTTTTAGGGCCGCAGCCACGGCATATGGAGGTTCCCAGGCTAGGGGTCAAATCAGAGCTGT
AGCCTCCAGCCTATGCCACAGCCACAGCAACATTAGATCCGAGTCGCATCTGTGACCTACACCA
CAGTTCATGGCAACACTGGATCCTTAACCCACTGATGGAGGCCAGGGATCGAACCCACAACCTC
ATGGTTCCTAGGTGGATTCATTTCCACTGCACCATGACAGGAACTCCTTATTTTATTTTTTTAT
ATGATTTTTATTTTTTTCATTACAGCTGGTTTACAGTATTCTGTCAATTTTCTACTGTGCAGCA
TGGTAGAAAATTGACAGTTATACATACATGTATACATTCTTTTTTCTCACATTATCCTGCTCCA
TCATAAGTGACTAGATATAGGTCCCAGTGCTACACAGCAGTATCTCATTGCTTACAGATGGGAA
TCTTGTTGGCTGCTGTTCCTTTCACATTTCCTGAAACCACACATGATATTAGATGTATTTGATC
AGATGTTTTCTCAAATTGTGTATGTGTAAAGGTCATCTACCTGCCACTTCCAACTAAATTTAGA
ATGGTTAAGTCATGATTAGGTATTAGCATTGTTTTTATGTACAATCAGTATTAAAGAATTAGGT
CTTGGAGTTCCCTTTGTGGCTCAGTGGTAACGAACCCAACTAATATGCATGAGGATGCAGGTTC
AATCCCTGGCCTCACTCAGTGGGTTAAGGATCTGGCCTCTCTGTGAGCTGTGGTGTAGGTTGAA
GACATGGCTCCGATCCAGTGTTGCTGTGACTGTGGTGTAGGCTGGCAGCTGCAGCTCTGATTCA
ACCCCTAGTGGCCCTAAAAAGCAAAAAAATAAAAGAATTAGGTCTTGAACCTGTAGGCCTGCCC
TTCCCTGTTCTTCACAGCACACACATTCTAAACACACCTCCTTCCATGTTTCATTATCCCATAA
CCCACTGCCCTGTGTTGATCTGCTGACAGGTTGTGGCGTTTTTCTCTCACCCCAGCGGTGTGGA
CAGAGCCACACACCCTCTGACCAACAACGGCTCTTGCGTGCGTGCTGCAGTGTTTCTTCTGTCA
GAGAGCCCAGCAGAGCTGCAGTTCCTCCCGTGCCAGCCCTGAGCTGAGCGAGGCGTGTCCAGTG
GAGATGGTGAAGATGACAAAGTCCAAAACTTTCCAAGCCTACCTGCCAAATTGCCATCGAACGT
ACAGCTGTGTCCACTGCAGAGCCCATCTGGCCAATCACGACGAGCTGATCTCCAAGTCCTTTCA
GGGGAGTCAGGGCCGAGCCTACCTCTTCAATTCTGTGGTGAATGTGGGTTGCGGCCCTGCGGAG
GAGCGGGTCCTTCTCACCGGCCTGCACGCCGTGGCGGACATCTACTGCGAGAACTGCAAGACCA
CACTTGGGTGGAAATATGAACATGCCTTTGAAAGCAGTCAGAAATATAAGGAAGGAAAATTTAT
CATTGAGCTTGCTCACATGATCAAAGACAATGGTTGGGAGTAAAGTGGAAACTTCCTGTTCCCT
TTTGAATCCTATTTTCTGAAAGACGGTAAATGCAATGGGAACCTCTGGGTGACAGTATTTCTTG
ACCTTGAGCCTCGAAGGCTGGCCTCTATGGCCCATCCTGTGGGTAAGGTGTCCCTCCCGTCTGT
GTCCTCTTCACGTACACAGTTGTTTCTGAGATGTTTCAATGACTTTTTTTTAACTTCTCAAGAT
CAAGCGAAAGACTTAACTGACTGATGACTTGCCCATCTAGTTAATACCTTCTTTTAACCAATGC
CTTTATGGTAGTGTCTGGCCATGCTCTTTCATACTCATAGAAGACCAAACCCCACCTCTAGAGA
CCACAGGCAGGGTAGCTTCAGAGGGCCAGTCTCCCCTCTTGTTTGGGGTGAAGGTATGAGAGCC
ACTCCCTCCCCAGTTCGCAGGACACATGGGTTGTTCCTCTGACAGATGATCTGTGAGGGCCGTG
CTGACTTAGGATTCTTCTGGAAGCAGTCTATGAATCTATGCACCAAGGGTGTTTTTTAGGAGGA
CACCACTGATAGCATTTTAGATAAGCTATAAATAGAGAAATGTGTCTAATGGATCATCTTGTTT
ATTGAAGCCACTGGCTCCTTAATCTAGAAAGTGAGCGAAGGAGTCATTAGCAAAGTTGGACCCT
GGCAGGCTCCACTGGGGACTCCATGTGGGGCACTGAGCAGCTGGCTGGTCCATGGCTTACAGTT
TAAAGCACTGGACCAAGTAAAATTGGATTTCCTTTCCTGCTCCGATGTACTTGAAGATTTTTTT
TTTTTTTTTTTTTTTGCATATGAAAGAGGCCAAAACAGGACAAACTCACAAACTTAAGATTTGC
CAGTTTGTTTGAAAAGTTTTTCAGAAAAGGATAAGTTGCAAGACAGGTTTAAGCTCTGAAGACA
TTTTGTCCCGTCAGCTGACAGATGGGGTCCAGCAGCCTCCCAAGTCCTGCATTTTTGCCTCACA
TTCAAGTTCCGACCCACCCATGCCTCAGCAGGGCGTGGGCACTGCACAGGGGTTTTGGCATTTT
GCAGAGAAGGGAGGCCAAAAAGCATTCCTAATTTTGGTTTTCAGTGTCAACCTGGCCCGCCACT
CTTGGCGTCTTGGGGTCTTCAGTGTCGTCACTGTGGCATGAGACCCCGGGACCCCAGGCCAAGG
GACAGGAAGAGCCAGGGACAGGGAAAGAGGAGGGCAGCGGGCCAGCTCTGAAGCTCCCTTAGAC
AAAGCTGGTCCCATGGCCACAAGCTGGAGCTAGTTGGGGATGGAGCAGGCACTGTCAACCGGTC
AGAAAAGGCCCCTCCCCGACCCCAGCCTACCCTGGGTCCCAAGTCCCCGCTGGTACATCAGGAT
CCTGGGGGTCTGGCCCAGCCACTCACCTAGGCTTCCCTTTGGCACTCCATCTACGACTCGCAGC
CTGGCTGTCCTGAGTGCAGGGTTGTCCATGCTGTGCCCAGCAGGCCTGGATGCATTTCGAGGTG
CCGAGGAAGTGCTCAGCCCAGCTAGGCCTCCAGCTGCAGGAGCTCTGCTGCCCTGTGAGCTGGG
CCCTGTCACCCAGGAGGCTTCAGATCTAGGGCCCCAGGAAACAGCAGCCACCCTCAGCCTGGTC
CTCAGTGAACCCTTGAAGGCCTGGCCTGCACCTGTCTGGAGGAGTGAATATGAGTTTCTGAGCT
GGCGTCTCCCTTCTCGCTGGGCTCCTCCCTGAGCCTTGGCCTGTGGCCAGCATGCTCCCCCGAA
AGATGCTCTCAGACCCCAAGGAATCTCCAGTTCCTCTGCCCGATCTCTGTACATACTCAGATTT
ATAGCTTTTGTATGTTCTGGGCACAGTCACTGCTCCTCTGACTTGAGCACTTTGGTTTTGTACC
ATCTCGGTGGTGGCACTGAAGCATTTCTATCAGTGGTCCATGGTTACTTTTGTGTTTTCATAAT
TGACACCAACAGAAACTCTTACCACTTTTTTTGTTGATCTTCTGCAAAATCCAAGCTCCATTTG
AAACCAAATGAATTGACCGTGAGCAGGCTTCCAGGAAGGGTACTCATGAGACCACAGCCAGATG
TGCTAGCAAAGTGCTGGGATGTTCCACCCTCTTAAATTCCTAAACGGTAAATACTACCCCACGG
CTTTTATTTAAATTATTTAAGATATTTTTTCCTTGAAAAGAGTGGGAGGTGATGCCAGGATTAT
AAATGCATTTGTTACACTATGTAGTGTCCTCTGCACAATACATCTGCTTTAGAAATGTAACTTA
GTTCTGTTGCTGTTTTATACAATATATATATAGTATTTTTATACTTTAACACTTACTCTTGATG
GCATCTGTCAGATATATTAGAAAGGATCAGAAATGGGAATTGTTTCAAAAGTCCTTTAATTTAC
CTGATGACCTCACCAGGGACTTACAAAATCTGAGCATTTTCAGTATCTAGAAAACTAATCTCAG
TTATACACCAACCTACAGAAATGTAAAGGCAAAGGCTCTGGGCAGGCCTGTCCTCCCACTGTGA
GCAGCACTATGGGCCTGCTGCCCAGGGGGGCCGGACTTCCCTCAGGGCAGGTGGGCACAGCCGC
TGGACAGATGGAGGGACAGAAGCCCAGGCCAGCTAGAAGGCTTGCCTGCCGAGCGGGTCTGTGG
AGCCCATGCGAAAAGCTGCCCTCGTCCCATGTCCAGCCCTCTGTCATCTGTGTGAGGTTCAAAA
ATAAAGCTTCTGGCACCCAAC

hide sequence

RefSeq Acc Id:

XM_021072284 ⟹ XP_020927943

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	50,202,481 - 50,208,732 (+)	NCBI

Sequence:

show sequence

GTCTGGCCAGGCCCTGAGCCCGAGTAGCAGATGCACCCCGACAGCCCTGGACCACCTTCGTGTG
CTGTGCTGTTGGAGGGTGTGTGTGAGCAGTCCTTTCAGGGGAGTCAGGGCCGAGCCTACCTCTT
CAATTCTGTGGTGAATGTGGGTTGCGGCCCTGCGGAGGAGCGGGTCCTTCTCACCGGCCTGCAC
GCCGTGGCGGACATCTACTGCGAGAACTGCAAGACCACACTTGGGTGGAAATATGAACATGCCT
TTGAAAGCAGTCAGAAATATAAGGAAGGAAAATTTATCATTGAGCTTGCTCACATGATCAAAGA
CAATGGTTGGGAGTAAAGTGGAAACTTCCTGTTCCCTTTTGAATCCTATTTTCTGAAAGACGGT
AAATGCAATGGGAACCTCTGGGTGACAGTATTTCTTGACCTTGAGCCTCGAAGGCTGGCCTCTA
TGGCCCATCCTGTGGGTAAGGTGTCCCTCCCGTCTGTGTCCTCTTCACGTACACAGTTGTTTCT
GAGATGTTTCAATGACTTTTTTTTAACTTCTCAAGATCAAGCGAAAGACTTAACTGACTGATGA
CTTGCCCATCTAGTTAATACCTTCTTTTAACCAATGCCTTTATGGTAGTGTCTGGCCATGCTCT
TTCATACTCATAGAAGACCAAACCCCACCTCTAGAGACCACAGGCAGGGTAGCTTCAGAGGGCC
AGTCTCCCCTCTTGTTTGGGGTGAAGGTATGAGAGCCACTCCCTCCCCAGTTCGCAGGACACAT
GGGTTGTTCCTCTGACAGATGATCTGTGAGGGCCGTGCTGACTTAGGATTCTTCTGGAAGCAGT
CTATGAATCTATGCACCAAGGGTGTTTTTTAGGAGGACACCACTGATAGCATTTTAGATAAGCT
ATAAATAGAGAAATGTGTCTAATGGATCATCTTGTTTATTGAAGCCACTGGCTCCTTAATCTAG
AAAGTGAGCGAAGGAGTCATTAGCAAAGTTGGACCCTGGCAGGCTCCACTGGGGACTCCATGTG
GGGCACTGAGCAGCTGGCTGGTCCATGGCTTACAGTTTAAAGCACTGGACCAAGTAAAATTGGA
TTTCCTTTCCTGCTCCGATGTACTTGAAGATTTTTTTTTTTTTTTTTTTTTTGCATATGAAAGA
GGCCAAAACAGGACAAACTCACAAACTTAAGATTTGCCAGTTTGTTTGAAAAGTTTTTCAGAAA
AGGATAAGTTGCAAGACAGGTTTAAGCTCTGAAGACATTTTGTCCCGTCAGCTGACAGATGGGG
TCCAGCAGCCTCCCAAGTCCTGCATTTTTGCCTCACATTCAAGTTCCGACCCACCCATGCCTCA
GCAGGGCGTGGGCACTGCACAGGGGTTTTGGCATTTTGCAGAGAAGGGAGGCCAAAAAGCATTC
CTAATTTTGGTTTTCAGTGTCAACCTGGCCCGCCACTCTTGGCGTCTTGGGGTCTTCAGTGTCG
TCACTGTGGCATGAGACCCCGGGACCCCAGGCCAAGGGACAGGAAGAGCCAGGGACAGGGAAAG
AGGAGGGCAGCGGGCCAGCTCTGAAGCTCCCTTAGACAAAGCTGGTCCCATGGCCACAAGCTGG
AGCTAGTTGGGGATGGAGCAGGCACTGTCAACCGGTCAGAAAAGGCCCCTCCCCGACCCCAGCC
TACCCTGGGTCCCAAGTCCCCGCTGGTACATCAGGATCCTGGGGGTCTGGCCCAGCCACTCACC
TAGGCTTCCCTTTGGCACTCCATCTACGACTCGCAGCCTGGCTGTCCTGAGTGCAGGGTTGTCC
ATGCTGTGCCCAGCAGGCCTGGATGCATTTCGAGGTGCCGAGGAAGTGCTCAGCCCAGCTAGGC
CTCCAGCTGCAGGAGCTCTGCTGCCCTGTGAGCTGGGCCCTGTCACCCAGGAGGCTTCAGATCT
AGGGCCCCAGGAAACAGCAGCCACCCTCAGCCTGGTCCTCAGTGAACCCTTGAAGGCCTGGCCT
GCACCTGTCTGGAGGAGTGAATATGAGTTTCTGAGCTGGCGTCTCCCTTCTCGCTGGGCTCCTC
CCTGAGCCTTGGCCTGTGGCCAGCATGCTCCCCCGAAAGATGCTCTCAGACCCCAAGGAATCTC
CAGTTCCTCTGCCCGATCTCTGTACATACTCAGATTTATAGCTTTTGTATGTTCTGGGCACAGT
CACTGCTCCTCTGACTTGAGCACTTTGGTTTTGTACCATCTCGGTGGTGGCACTGAAGCATTTC
TATCAGTGGTCCATGGTTACTTTTGTGTTTTCATAATTGACACCAACAGAAACTCTTACCACTT
TTTTTGTTGATCTTCTGCAAAATCCAAGCTCCATTTGAAACCAAATGAATTGACCGTGAGCAGG
CTTCCAGGAAGGGTACTCATGAGACCACAGCCAGATGTGCTAGCAAAGTGCTGGGATGTTCCAC
CCTCTTAAATTCCTAAACGGTAAATACTACCCCACGGCTTTTATTTAAATTATTTAAGATATTT
TTTCCTTGAAAAGAGTGGGAGGTGATGCCAGGATTATAAATGCATTTGTTACACTATGTAGTGT
CCTCTGCACAATACATCTGCTTTAGAAATGTAACTTAGTTCTGTTGCTGTTTTATACAATATAT
ATATAGTATTTTTATACTTTAACACTTACTCTTGATGGCATCTGTCAGATATATTAGAAAGGAT
CAGAAATGGGAATTGTTTCAAAAGTCCTTTAATTTACCTGATGACCTCACCAGGGACTTACAAA
ATCTGAGCATTTTCAGTATCTAGAAAACTAATCTCAGTTATACACCAACCTACAGAAATGTAAA
GGCAAAGGCTCTGGGCAGGCCTGTCCTCCCACTGTGAGCAGCACTATGGGCCTGCTGCCCAGGG
GGGCCGGACTTCCCTCAGGGCAGGTGGGCACAGCCGCTGGACAGATGGAGGGACAGAAGCCCAG
GCCAGCTAGAAGGCTTGCCTGCCGAGCGGGTCTGTGGAGCCCATGCGAAAAGCTGCCCTCGTCC
CATGTCCAGCCCTCTGTCATCTGTGTGAGGTTCAAAAATAAAGCTTCTGGCACCCAAC

hide sequence

Protein Sequences


Protein RefSeqs	XP_003133037	(Get FASTA)	NCBI Sequence Viewer
	XP_020927941	(Get FASTA)	NCBI Sequence Viewer
	XP_020927943	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000081262.1
	ENSSSCP00035039074.1
	ENSSSCP00045015190.1
	ENSSSCP00050039381.1
	ENSSSCP00055046972.1
	ENSSSCP00070034574.1

RefSeq Acc Id:	XP_003133037 ⟸ XM_003132989
- Peptide Label:	isoform X1
- UniProtKB:	A0A4X1V0N4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVKMTKSKTFQAYLPNCHRTYSCVHCRAHLANHDELISKSFQGSQGRAYLFNSVVNVGCGPAEE RVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKYKEGKFIIELAHMIKDNGWE hide sequence

RefSeq Acc Id:	XP_020927941 ⟸ XM_021072282
- Peptide Label:	isoform X1
- UniProtKB:	A0A4X1V0N4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVKMTKSKTFQAYLPNCHRTYSCVHCRAHLANHDELISKSFQGSQGRAYLFNSVVNVGCGPAEE RVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKYKEGKFIIELAHMIKDNGWE hide sequence

RefSeq Acc Id:	XP_020927943 ⟸ XM_021072284
- Peptide Label:	isoform X2
- Sequence:	show sequence MHPDSPGPPSCAVLLEGVCEQSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENC KTTLGWKYEHAFESSQKYKEGKFIIELAHMIKDNGWE hide sequence

RefSeq Acc Id:

ENSSSCP00000044178 ⟸ ENSSSCT00000060428

RefSeq Acc Id:

ENSSSCP00000081262 ⟸ ENSSSCT00000101115

Protein Domains

Yippee

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000037288	Ensembl
	ENSSSCG00000054789	Ensembl, UniProtKB/TrEMBL
	ENSSSCG00035068940	UniProtKB/TrEMBL
	ENSSSCG00045012945	UniProtKB/TrEMBL
	ENSSSCG00050067090	UniProtKB/TrEMBL
	ENSSSCG00055029544	UniProtKB/TrEMBL
	ENSSSCG00070020708	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000101115.1	UniProtKB/TrEMBL
	ENSSSCT00035093083.1	UniProtKB/TrEMBL
	ENSSSCT00045022047.1	UniProtKB/TrEMBL
	ENSSSCT00050091473.1	UniProtKB/TrEMBL
	ENSSSCT00055058675.1	UniProtKB/TrEMBL
	ENSSSCT00070041179.1	UniProtKB/TrEMBL
InterPro	Yippee	UniProtKB/TrEMBL
	Yippee/Mis18/Cereblon	UniProtKB/TrEMBL
	Yippee_fam	UniProtKB/TrEMBL
KEGG Report	ssc:100523752	UniProtKB/TrEMBL
NCBI Gene	YPEL1	ENTREZGENE
PANTHER	PROTEIN YIPPEE-LIKE	UniProtKB/TrEMBL
	PTHR13848	UniProtKB/TrEMBL
Pfam	Yippee-Mis18	UniProtKB/TrEMBL
PROSITE	YIPPEE	UniProtKB/TrEMBL
UniProt	A0A4X1V0N4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8W4FP50_PIG	UniProtKB/TrEMBL
VGNC ID	VGNC:104099	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar