NAA50 (N-alpha-acetyltransferase 50, NatE catalytic subunit) - Rat Genome Database

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Gene: NAA50 (N-alpha-acetyltransferase 50, NatE catalytic subunit) Sus scrofa
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Symbol: NAA50
Name: N-alpha-acetyltransferase 50, NatE catalytic subunit
RGD ID: 14099484
Description: ENCODES a protein that exhibits H4 histone acetyltransferase activity (inferred); N-acetyltransferase activity (inferred); peptide alpha-N-acetyltransferase activity (inferred); INVOLVED IN establishment of mitotic sister chromatid cohesion (inferred); histone H4 acetylation (inferred); mitotic sister chromatid cohesion, centromeric (inferred); FOUND IN cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: N(alpha)-acetyltransferase 50, NatE catalytic subunit; N-alpha-acetyltransferase 50
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13146,193,218 - 146,222,133 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113146,193,186 - 146,217,739 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213155,778,467 - 155,802,802 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (ISO)
cytosol  (IEA)
NatA complex  (IEA)
nucleus  (IEA)

References
Additional References at PubMed
PMID:14681463   PMID:15679890  


Genomics

Comparative Map Data
NAA50
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13146,193,218 - 146,222,133 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113146,193,186 - 146,217,739 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213155,778,467 - 155,802,802 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NAA50
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl3113,716,458 - 113,746,300 (-)EnsemblGRCh38hg38GRCh38
GRCh383113,716,458 - 113,746,249 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh373113,435,305 - 113,465,096 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363114,920,531 - 114,947,786 (-)NCBINCBI36hg18NCBI36
Build 343114,920,530 - 114,947,786NCBI
Celera3111,846,332 - 111,873,586 (-)NCBI
Cytogenetic Map3q13.31NCBI
HuRef3110,810,207 - 110,840,018 (-)NCBIHuRef
CHM1_13113,398,653 - 113,428,466 (-)NCBICHM1_1
Naa50
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391643,960,154 - 43,983,825 (+)NCBIGRCm39mm39
GRCm39 Ensembl1643,960,193 - 43,983,729 (+)Ensembl
GRCm381644,139,791 - 44,163,462 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1644,139,830 - 44,163,366 (+)EnsemblGRCm38mm10GRCm38
MGSCv371644,139,922 - 44,163,477 (+)NCBIGRCm37mm9NCBIm37
MGSCv361644,059,141 - 44,082,696 (+)NCBImm8
Celera1644,497,008 - 44,520,827 (+)NCBICelera
Cytogenetic Map16B4NCBI
Naa50
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21156,538,366 - 56,560,842 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1156,538,366 - 56,560,842 (-)Ensembl
Rnor_6.01161,508,162 - 61,530,830 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1161,462,994 - 61,530,837 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1161,466,962 - 61,470,348 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01165,614,950 - 65,637,732 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41158,103,982 - 58,126,566 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11158,165,242 - 58,184,158 (-)NCBI
Celera1156,091,522 - 56,113,995 (-)NCBICelera
Cytogenetic Map11q21NCBI
Naa50
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495542713,845,806 - 13,868,323 (-)NCBIChiLan1.0ChiLan1.0
NAA50
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.13117,781,455 - 117,808,913 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3117,781,455 - 117,808,913 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v03110,860,595 - 110,888,033 (-)NCBIMhudiblu_PPA_v0panPan3
NAA50
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha3318,111,480 - 18,139,497 (-)NCBI
ROS_Cfam_1.03318,253,597 - 18,281,699 (-)NCBI
UMICH_Zoey_3.13318,057,364 - 18,085,408 (-)NCBI
UNSW_CanFamBas_1.03318,104,745 - 18,132,483 (-)NCBI
UU_Cfam_GSD_1.03318,655,841 - 18,683,924 (-)NCBI
Naa50
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602136,264,699 - 136,285,768 (+)NCBI
SpeTri2.0NW_0049365361,221,080 - 1,257,196 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NAA50
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12267,113,126 - 67,142,391 (+)NCBI
ChlSab1.1 Ensembl2267,113,123 - 67,139,627 (+)Ensembl
Vero_WHO_p1.0NW_02366604199,328,044 - 99,356,888 (-)NCBI
Naa50
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473134,781,120 - 34,808,863 (+)NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 10 4 3 5 2 21 2 3 3
Low 2
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000013041   ⟹   ENSSSCP00000012698
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl13146,193,218 - 146,215,665 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000040413   ⟹   ENSSSCP00000041793
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl13146,193,341 - 146,222,133 (+)Ensembl
RefSeq Acc Id: NM_001244807   ⟹   NP_001231736
RefSeq Status: VALIDATED
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113146,193,218 - 146,215,668 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005670201   ⟹   XP_005670258
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.113146,193,186 - 146,217,739 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001231736 (Get FASTA)   NCBI Sequence Viewer  
  XP_005670258 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005670258   ⟸   XM_005670201
- Peptide Label: isoform X1
- UniProtKB: A0A287ACR8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001231736   ⟸   NM_001244807
- UniProtKB: A0A286ZUF5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000041793   ⟸   ENSSSCT00000040413
RefSeq Acc Id: ENSSSCP00000012698   ⟸   ENSSSCT00000013041
Protein Domains
N-acetyltransferase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000011917 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00070004609 UniProtKB/TrEMBL
Ensembl Protein ENSSSCP00000012698 UniProtKB/TrEMBL
  ENSSSCP00000041793 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00070007181 UniProtKB/TrEMBL
  ENSSSCP00070007191 UniProtKB/TrEMBL
  ENSSSCP00070007195 UniProtKB/TrEMBL
  ENSSSCP00070007215 UniProtKB/TrEMBL
  ENSSSCP00070007219 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000013041 UniProtKB/TrEMBL
  ENSSSCT00000040413 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCT00070008735 UniProtKB/TrEMBL
  ENSSSCT00070008753 UniProtKB/TrEMBL
  ENSSSCT00070008758 UniProtKB/TrEMBL
  ENSSSCT00070008780 UniProtKB/TrEMBL
  ENSSSCT00070008789 UniProtKB/TrEMBL
InterPro Acyl_CoA_acyltransferase UniProtKB/TrEMBL
  GNAT_dom UniProtKB/TrEMBL
KEGG Report ssc:100513438 UniProtKB/TrEMBL
NCBI Gene NAA50 ENTREZGENE
Pfam Acetyltransf_1 UniProtKB/TrEMBL
PROSITE GNAT UniProtKB/TrEMBL
Superfamily-SCOP SSF55729 UniProtKB/TrEMBL
UniProt A0A286ZUF5 ENTREZGENE
  A0A287ACR8 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1SVS9_PIG UniProtKB/TrEMBL
  A0A4X1SXS9_PIG UniProtKB/TrEMBL
  A0A4X1SXY4_PIG UniProtKB/TrEMBL
  A0A4X1SXZ8_PIG UniProtKB/TrEMBL
  A0A4X1SY20_PIG UniProtKB/TrEMBL
  F2Z5Q7_PIG UniProtKB/TrEMBL
VGNC ID VGNC:104002 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-12-03 NAA50  N-alpha-acetyltransferase 50, NatE catalytic subunit  NAA50  N(alpha)-acetyltransferase 50, NatE catalytic subunit  Symbol and/or name change 5135510 APPROVED