PALLD (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 14 | 20,678,452 - 21,020,125 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 14 | 20,678,456 - 21,020,125 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 14 | 21,965,285 - 22,200,581 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PALLD (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 4 | 168,497,052 - 168,928,441 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 4 | 168,497,052 - 168,928,457 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 4 | 169,418,203 - 169,849,592 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 4 | 169,654,792 - 170,086,183 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 4 | 166,748,020 - 167,180,983 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | q32.3 | NCBI | | | | | HuRef | 4 | 165,170,970 - 165,603,126 (+) | NCBI | | HuRef | | | CHM1_1 | 4 | 169,394,774 - 169,826,047 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 4 | 171,856,045 - 172,287,862 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Palld (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 8 | 61,964,465 - 62,355,741 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 8 | 61,964,467 - 62,355,724 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 8 | 61,511,431 - 61,902,707 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 8 | 61,511,433 - 61,902,690 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 8 | 63,993,818 - 64,381,487 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 8 | 64,403,398 - 64,794,832 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 8 | 64,078,203 - 64,475,199 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | B3.1 | NCBI | | | | | cM Map | 8 | 31.23 | NCBI | | | | |
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Palld (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 16 | 33,238,943 - 33,632,236 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 16 | 28,228,006 - 28,621,349 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 16 | 27,981,354 - 28,621,337 (+) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 | 16 | 31,865,712 - 31,948,168 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 16 | 31,734,944 - 31,946,242 (+) | NCBI | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 16 | 31,401,114 - 31,786,201 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 16 | 31,854,459 - 31,933,792 | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 16 | 28,535,132 - 28,616,857 (+) | NCBI | | Celera | | | Cytogenetic Map | 16 | p12 | NCBI | | | | |
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PALLD (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 3 | 166,273,693 - 166,697,100 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 4 | 166,787,075 - 167,052,445 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 4 | 160,718,475 - 161,140,436 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 4 | 173,120,958 - 173,216,409 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | |
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PALLD (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 25 | 19,147,310 - 19,568,712 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 25 | 19,146,898 - 19,553,679 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 25 | 19,178,454 - 19,599,760 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 25 | 19,285,396 - 19,694,065 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 25 | 19,285,412 - 19,694,079 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 25 | 19,146,258 - 19,574,549 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 25 | 19,153,183 - 19,562,304 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 25 | 19,215,651 - 19,637,403 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Palld (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404943 | 20,372,101 - 20,739,513 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936516 | 802,484 - 1,151,801 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936516 | 786,358 - 1,151,910 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PALLD (Chlorocebus sabaeus - green monkey) |
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Palld (Heterocephalus glaber - naked mole-rat) |
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