SAMHD1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 17 | 40,107,462 - 40,171,878 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 17 | 40,117,348 - 40,171,935 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 17 | 45,558,314 - 45,611,643 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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SAMHD1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 20 | 36,889,773 - 36,951,708 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 20 | 36,890,229 - 36,951,893 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 20 | 35,518,176 - 35,580,111 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 20 | 34,954,059 - 35,013,590 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 20 | 34,954,058 - 35,013,590 | NCBI | | | | | Celera | 20 | 32,227,775 - 32,287,786 (-) | NCBI | | Celera | | | Cytogenetic Map | 20 | q11.23 | NCBI | | | | | HuRef | 20 | 32,255,951 - 32,316,085 (-) | NCBI | | HuRef | | | CHM1_1 | 20 | 35,421,787 - 35,482,498 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 20 | 38,614,121 - 38,676,051 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Samhd1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 156,939,454 - 156,977,016 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 156,939,453 - 156,977,185 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 157,097,534 - 157,135,096 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 157,097,533 - 157,135,265 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 156,923,265 - 156,960,958 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 156,788,970 - 156,826,663 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 163,030,928 - 163,069,082 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | H1 | NCBI | | | | | cM Map | 2 | 78.0 | NCBI | | | | |
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Samhd1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 3 | 166,179,742 - 166,214,448 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 145,761,549 - 145,794,420 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 145,761,558 - 145,794,386 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 149,586,957 - 149,619,774 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 158,084,906 - 158,117,628 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 155,825,467 - 155,858,563 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 153,210,829 - 153,250,705 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 153,210,829 - 153,250,641 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 158,468,644 - 158,504,183 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 147,689,421 - 147,727,429 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 147,595,329 - 147,627,065 (-) | NCBI | | | | | Celera | 3 | 144,468,270 - 144,500,913 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q42 | NCBI | | | | |
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Samhd1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955422 | 24,735,161 - 24,778,830 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955422 | 24,714,103 - 24,780,672 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SAMHD1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 21 | 42,629,145 - 42,687,452 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 20 | 42,622,243 - 42,680,550 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 20 | 33,224,200 - 33,282,018 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 20 | 34,341,367 - 34,398,514 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 20 | 34,341,367 - 34,398,314 (-) | Ensembl | panpan1.1 | | panPan2 | |
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SAMHD1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 24 | 25,623,997 - 25,676,336 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 24 | 25,626,134 - 25,680,902 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 24 | 25,269,008 - 25,324,975 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 24 | 26,321,372 - 26,377,665 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 24 | 26,322,848 - 26,373,771 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 24 | 25,599,032 - 25,655,273 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 24 | 25,699,545 - 25,755,789 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 24 | 26,189,021 - 26,245,159 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Samhd1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024408640 | 174,510,839 - 174,568,927 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936561 | 4,180,546 - 4,229,036 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936561 | 4,180,607 - 4,238,623 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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SAMHD1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 2 | 57,641,634 - 57,699,685 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 2 | 57,639,046 - 57,699,525 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666054 | 357,564 - 415,279 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Samhd1 (Heterocephalus glaber - naked mole-rat) |
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