CDC25A (cell division cycle 25A) - Rat Genome Database

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Gene: CDC25A (cell division cycle 25A) Sus scrofa
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Symbol: CDC25A
Name: cell division cycle 25A
RGD ID: 14065510
Description: ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); positive regulation of cholangiocyte proliferation (ortholog); response to radiation (ortholog); ASSOCIATED WITH autosomal recessive polycystic kidney disease (ortholog); breast carcinoma (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: M-phase inducer phosphatase 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa10.21334,164,323 - 34,190,078 (-)NCBISscrofa10.2Sscrofa10.2susScr3


References

Genomics

Comparative Map Data
CDC25A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa10.21334,164,323 - 34,190,078 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CDC25A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl348,157,146 - 48,188,417 (-)EnsemblGRCh38hg38GRCh38
GRCh38348,157,146 - 48,188,417 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37348,198,636 - 48,229,907 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36348,173,672 - 48,204,805 (-)NCBINCBI36hg18NCBI36
Build 34348,173,671 - 48,204,805NCBI
Celera348,147,668 - 48,178,797 (-)NCBI
Cytogenetic Map3p21.31NCBI
HuRef348,253,008 - 48,284,141 (-)NCBIHuRef
CHM1_1348,150,488 - 48,181,619 (-)NCBICHM1_1
Cdc25a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399109,704,545 - 109,722,963 (+)NCBIGRCm39mm39
GRCm39 Ensembl9109,704,647 - 109,722,963 (+)Ensembl
GRCm389109,875,518 - 109,893,895 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9109,875,579 - 109,893,895 (+)EnsemblGRCm38mm10GRCm38
MGSCv379109,778,083 - 109,796,394 (+)NCBIGRCm37mm9NCBIm37
MGSCv369109,733,366 - 109,751,296 (+)NCBImm8
Celera9109,601,935 - 109,621,511 (+)NCBICelera
Cytogenetic Map9F2NCBI
cM Map959.81NCBI
Cdc25a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.28109,864,356 - 109,882,734 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl8109,864,478 - 109,882,701 (+)Ensembl
Rnor_6.08117,953,223 - 117,971,552 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8117,953,444 - 117,971,519 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08117,305,748 - 117,324,074 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48114,237,704 - 114,255,971 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18114,257,158 - 114,275,426 (+)NCBI
Celera8109,154,287 - 109,172,351 (+)NCBICelera
Cytogenetic Map8q32NCBI
Cdc25a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542024,344,388 - 24,362,596 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542024,345,002 - 24,361,802 (+)NCBIChiLan1.0ChiLan1.0
CDC25A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1349,154,307 - 49,186,115 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl349,154,307 - 49,186,115 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0348,068,601 - 48,099,806 (-)NCBIMhudiblu_PPA_v0panPan3
CDC25A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12040,823,683 - 40,849,113 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2040,823,459 - 40,847,608 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2040,741,248 - 40,764,940 (+)NCBI
ROS_Cfam_1.02041,309,415 - 41,334,896 (+)NCBI
UMICH_Zoey_3.12040,549,928 - 40,573,619 (+)NCBI
UNSW_CanFamBas_1.02040,951,503 - 40,974,658 (+)NCBI
UU_Cfam_GSD_1.02041,231,962 - 41,255,400 (+)NCBI
Cdc25a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118202,108,272 - 202,130,970 (-)NCBI
SpeTri2.0NW_0049365961,657,411 - 1,680,109 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CDC25A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1229,534,114 - 9,564,927 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl229,534,053 - 9,564,741 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666041157,537,318 - 157,569,097 (+)NCBIVero_WHO_p1.0
Cdc25a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473073,443,895 - 73,463,979 (+)NCBIHetGla_female_1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 1
Low 10 4 3 5 2 22 2 3 3
Below cutoff

Sequence


Protein Sequences
Protein RefSeqs XP_020937595 (Get FASTA)   NCBI Sequence Viewer  
  XP_020937596 (Get FASTA)   NCBI Sequence Viewer  
  XP_020937597 (Get FASTA)   NCBI Sequence Viewer  
  XP_020937598 (Get FASTA)   NCBI Sequence Viewer  
Protein Domains
Rhodanese


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000021494 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSSSCP00000021201 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCP00000050712 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000025526 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCT00000038628 ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH 3.40.250.10 UniProtKB/TrEMBL
InterPro MPI_Phosphatase UniProtKB/TrEMBL
  Rhodanese-like_dom UniProtKB/TrEMBL
  Rhodanese-like_dom_sf UniProtKB/TrEMBL
NCBI Gene CDC25A ENTREZGENE
Pfam M-inducer_phosp UniProtKB/TrEMBL
  Rhodanese UniProtKB/TrEMBL
PRINTS MPIPHPHTASE UniProtKB/TrEMBL
PROSITE RHODANESE_3 UniProtKB/TrEMBL
SMART RHOD UniProtKB/TrEMBL
Superfamily-SCOP SSF52821 UniProtKB/TrEMBL
UniProt A0A287B2P5_PIG UniProtKB/TrEMBL
  I3LAY3_PIG UniProtKB/TrEMBL
VGNC ID VGNC:86446 ENTREZGENE