VIT (vitrin) - Rat Genome Database

Name: VIT
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: VIT (vitrin) Sus scrofa

Analyze

Symbol:

VIT

Name:

vitrin

RGD ID:

14062123

Description:

ENCODES a protein that exhibits glycosaminoglycan binding (inferred); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN extracellular matrix (inferred); interstitial matrix (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	VIT (vitrin)	HGNC	Ensembl, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Vit (vitrin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Vit (vitrin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Vit (vitrin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	VIT (vitrin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	VIT (vitrin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Vit (vitrin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	VIT (vitrin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Vit (vitrin)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	103,377,575 - 103,492,985 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	103,379,127 - 103,492,989 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	109,958,866 - 110,020,029 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

extracellular matrix organization (IBA,IEA,ISO)

positive regulation of cell-substrate adhesion (IBA,IEA,ISO)

spinal cord development (IEA)

Cellular Component

extracellular matrix (IEA)

interstitial matrix (IBA,IEA)

Molecular Function

glycosaminoglycan binding (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

VIT
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	103,377,575 - 103,492,985 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	103,379,127 - 103,492,989 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	109,958,866 - 110,020,029 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

VIT
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	36,696,707 - 36,814,794 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	36,696,690 - 36,814,794 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	36,923,850 - 37,041,937 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	36,777,418 - 36,895,433 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	2	36,835,564 - 36,953,580	NCBI
Celera	2	36,764,899 - 36,882,980 (+)	NCBI		Celera
Cytogenetic Map	2	p22.2	NCBI
HuRef	2	36,664,350 - 36,808,557 (+)	NCBI		HuRef
CHM1_1	2	36,853,402 - 36,971,176 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	36,703,628 - 36,821,971 (+)	NCBI		T2T-CHM13v2.0

Vit
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	78,815,480 - 78,934,838 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	78,815,493 - 78,934,837 (+)	Ensembl		GRCm39 Ensembl
GRCm38	17	78,508,051 - 78,627,409 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	78,508,064 - 78,627,408 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	78,907,480 - 79,026,738 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	78,413,198 - 78,532,456 (+)	NCBI		MGSCv36	mm8
Celera	17	82,812,373 - 82,934,688 (+)	NCBI		Celera
Cytogenetic Map	17	E3	NCBI
cM Map	17	49.38	NCBI

Vit
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	22,198,095 - 22,317,758 (-)	NCBI		GRCr8
mRatBN7.2	6	16,445,966 - 16,565,644 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	16,445,955 - 16,565,665 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	6	1,091,817 - 1,208,888 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	1,147,012 - 1,208,392 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	6	1,083,150 - 1,199,622 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	6	1,319,479 - 1,399,647 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	6	16,094,236 - 16,211,803 (-)	NCBI		Celera
Cytogenetic Map	6	q12	NCBI

Vit
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955441	4,546,984 - 4,649,962 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955441	4,527,281 - 4,650,384 (+)	NCBI	ChiLan1.0	ChiLan1.0

VIT
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	12	89,665,711 - 89,780,489 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2A	89,669,694 - 89,784,465 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2A	36,726,717 - 36,841,491 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2A	37,490,294 - 37,604,177 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2A	37,490,294 - 37,604,177 (+)	Ensembl	panpan1.1		panPan2

VIT
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	29,142,924 - 29,259,800 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	29,143,069 - 29,243,406 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	28,956,626 - 29,062,499 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	29,793,055 - 29,897,704 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	29,793,067 - 29,899,491 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	29,021,084 - 29,125,612 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	29,082,651 - 29,187,237 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	29,301,977 - 29,406,620 (+)	NCBI		UU_Cfam_GSD_1.0

Vit
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024406292	42,737,221 - 42,842,844 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936663	1,403,128 - 1,484,353 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936663	1,402,713 - 1,508,253 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

VIT
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	70,593,305 - 70,725,537 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	14	70,593,739 - 70,688,664 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666045	41,232,217 - 41,360,522 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Vit
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624738	18,358,372 - 18,447,689 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624738	18,339,587 - 18,448,639 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in VIT
4002 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium
Low	5	3	3	2	2	23		1	1
Below cutoff	5	1		2			2	1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013996219	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013996220	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021087634	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021087635	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021087636	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK344120	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU570644	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000009303 ⟹ ENSSSCP00000009067

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	3	103,378,085 - 103,492,881 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000023727 ⟹ ENSSSCP00000023843

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	3	103,379,139 - 103,492,964 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000058017 ⟹ ENSSSCP00000047021

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	3	103,378,119 - 103,459,798 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000072859 ⟹ ENSSSCP00000064707

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	3	103,434,575 - 103,492,964 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000088489 ⟹ ENSSSCP00000065372

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	3	103,377,575 - 103,492,985 (-)	Ensembl

RefSeq Acc Id:

XM_013996219 ⟹ XP_013851673

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	3	103,379,127 - 103,492,988 (-)	NCBI

Sequence:

show sequence

AAAAACCAGTGTGAGAAGCAGTGTGTGTGAGTGTGTGTGTGTGTGTGCGTGTGCGTGGTGTAAA
TGTGCTTTTCAAAGTGCTGAGAGGTTGATGGGAATGTTTGATTAGCTTCTCTCAGAAGAGAAAA
GGTGCTTGGACTTCTTGTTTCTTCTTTAGAATAATTTGGATGGGATTTGTGATGCAGAACAGCT
TAAGGAAAAAAGAATATCCATTCAGTGTGGTGGAAAATTTTTGAAAAAAAAATTTGCTGTCTTC
AAACAAGGGTGCTGTTTTGATATTCATGGGGATTGTTGTCCTCACTATGAAGGCATCTGTTATT
GAAATGTTCCTTGTTTTGCTGGTGACTGGAATACAGTCAAATAAAGAAATGACAAAGAAGATTA
AAAGGCCCAAATTCACTGTGCCTCAGATCAACTGCGATGTGAAAGCTGGAAAGATAATGAATCC
TGAGTTCTTGGTGAAGTGCCCAGCAGGATGCCAGGACCCTAGGTACCATGTCTATGGCACTGAT
GTCTATGCATCCTACTCCAGCGTGTGCGGTGCTGCAGTTCACAGTGGTGTGCTTGATAACTCAG
GAGGGAAAATACTTGTTCGGAAAGTTGCTGGACAGTCTGGCTACCACGGGAGTTATTCCAATGG
AGTCTGGTCATTATCCCTTCCACGATGGAGAGAATCATTTGTGGTCTCAGAAGGTAAACCCCAA
AAGGGTGTAACCTACCCATCGGCTCTTACATATTCATCATCTAAAAGCCCAGCTGCCAAAGCAG
GTGAGACCACAAAAGCCTATCAGAGCCCATCAGTTCCAGGGACAACCGCACAGCCAGTCACCCT
GATGCAGGTACCGGGGACCACTGCAGTCGAAGCCACCCACACTGCCTTGTCAAAGCCATCCCCA
TCTGCAGGCTTTACCACCAGCAGCCTCAGACTACAGCCTGTGGGCCAGAGAAGCCGGGAGCTGG
GGGAGGAACCTGACTTATGGAAACCTGGATCAGTCCTTCTAGATGCAGGATTTGTTCCAAAAGA
AGAATTAAGCACACAGTCTTTGGAGCCAGTATCCCAGGGAGATCCAAGCTGCAAAGTCGACCTG
TCGTTTTTGATCGATGGGAGCTCAAGCATCGGCAAACGGCGATTCCGAATCCAGAAGCAGTTCC
TGGCCGACGTTGCCCAAGCTCTCGACATCGGCCCTGCTGGTCCACTGATGGGCGTTGTTCAGTA
CGGAGACAACCCTGCTACCCAATTTAATCTCAAGACTCACATGAATTCCCGGGATCTGAAGACG
GCCATAGAAAAAATCACCCAGAGAGGAGGGCTTTCTAATGTAGGCCGGGCCATCTCCTTTGTGA
CCAAGAACTTCTTTTCCAAATCCAATGGAAACAGAGGCGGTGCTCCCAACGTGGCCGTGGTGAT
GGTGGACGGCTGGCCTACGGACAAGGTGGAGGAGGCATCAAGGCTTGCAAGAGAGTCAGGAATC
AATATTTTCTTCATCACCATTGAAGGTGCGGTGGAAAATGAGAAGCAATATGTGCTGGAGCCCA
ACTTTGCAAACAAGGCTGTGTGCAGAACCAACGGCTTCTACTCACTCAATGTGCAGAACTGGTA
CGGCCTCCACAAGAGCGTGCAGCCCCTGGTGAAGCGGGTCTGTGACACCGACCGGCTGGCCTGC
AGCAAGACCTGCCTGAACTCAGCCGACATCGGCTTCGTCATCGACGGCTCCAGCAGCGTGGGGA
CAGGCAACTTCCGCACTGTCCTCCAGTTTGTGGCCAACCTCAGCAAGGAGTTTGACATTTCTGA
CACGGACACGCGGGTCGGGGCCGTGCAATACACCTACGAGCAGCGGCTAGAGTTTGGATTTGAC
CAGTATACCACCAAGCCCGACGTCCTCAACGCCATCAAGAGGGTGGGGTATTGGAGCGGTGGGA
CCAGCACCGGGGCTGCCATCAACTATGCCCTAGAACAGCTCTTCAAGAAGTCCAAGCCCAACAA
GAGGAAGTTAATGATTCTCATCACGGACGGGAGGTCCTACGACGACGTCCGGATACCGGCCATG
GTTGCGCATCACAAGGGTGTGATCACCTACGCAATAGGCGTGGCATGGGCTGCACAGGAGGAGC
TGGAAATCATCGCCACTCACCCTGCCAGGGACCATGCCTTCTTTGTGGACGAGTTTGACAACCT
CTACAAATCCGTGCCCAAGATCATCCAGAACATTTGTACAGAGTTCAACTCACAGCCTCGGAAC
TGAATTCAGAGCAGGCAAAGCACCAGCAAGAGCTGCTTTCCCAACCAGCTCTGGGACAACCCCC
AACGCTTTATGGGACGCACGTGGGGCAGCAAGGCACGCAGGGCTTGGAAGGATGTCTTGTTATT
ATTCTTTGCCAGTGTGGTTTTTCAGACTTCAAGACTTGGAGTTAGAAAGATGATCATAAATGTG
TAGAATGAGCCAAAATGATAGGTCATTTTGGGAGTGCTGGGGATTTTAATTTTGAGAATTGTTT
TTAAAGTAAGTATTGAGACTAGAATGCAGCACTTATGACAGGCTTAAGTAGAGTTTTTGTGAGA
TTTTTCACATTTTTATTTCCCCTTGGAATTCTGTAACTCTCCACAAGTTCATTTTTGTCATGAC
AGTAGAGAAGTCGATTAATTAAATGTTTGAAAGGATTTTGTGCAA

hide sequence

RefSeq Acc Id:

XM_013996220 ⟹ XP_013851674

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	3	103,379,127 - 103,492,988 (-)	NCBI

Sequence:

show sequence

AAAAACCAGTGTGAGAAGCAGTGTGTGTGAGTGTGTGTGTGTGTGTGCGTGTGCGTGGTGTAAA
TGTGCTTTTCAAAGTGCTGAGAGGTTGATGGGAATGTTTGATTAGCTTCTCTCAGAAGAGAAAA
GGTGCTTGGACTTCTTGTTTCTTCTTTAGAATAATTTGGATGGGATTTGTGATGCAGAACAGCT
TAAGGAAAAAAGAATATCCATTCAGTGTGGTGGAAAATTTTTGAAAAAAAAATTTGCTGTCTTC
AAACAAGGGTGCTGTTTTGATATTCATGGGGATTGTTGTCCTCACTATGAAGGCATCTGTTATT
GAAATGTTCCTTGTTTTGCTGGTGACTGGAATACAGTCAAATAAAGAAATGACAAAGAAGATTA
AAAGGCCCAAATTCACTGTGCCTCAGATCAACTGCGATGTGAAAGCTGGAAAGATAATGAATCC
TGAGTTCTTGGTGAAGTGCCCAGCAGGATGCCAGGACCCTAGGTACCATGTCTATGGCACTGAT
GTCTATGCATCCTACTCCAGCGTGTGCGGTGCTGCAGTTCACAGTGGTGTGCTTGATAACTCAG
GAGGGAAAATACTTGTTCGGAAAGTTGCTGGACAGTCTGGCTACCACGGGAGTTATTCCAATGG
AGTCTGGTCATTATCCCTTCCACGATGGAGAGAATCATTTGTGGTCTCAGAAGGTAAACCCCAA
AAGGGTGTAACCTACCCATCGGCTCTTACATATTCATCATCTAAAAGCCCAGCTGCCAAAGCAG
GGGAGGAACCTGACTTATGGAAACCTGGATCAGTCCTTCTAGATGCAGGATTTGTTCCAAAAGA
AGAATTAAGCACACAGTCTTTGGAGCCAGTATCCCAGGGAGATCCAAGCTGCAAAGTCGACCTG
TCGTTTTTGATCGATGGGAGCTCAAGCATCGGCAAACGGCGATTCCGAATCCAGAAGCAGTTCC
TGGCCGACGTTGCCCAAGCTCTCGACATCGGCCCTGCTGGTCCACTGATGGGCGTTGTTCAGTA
CGGAGACAACCCTGCTACCCAATTTAATCTCAAGACTCACATGAATTCCCGGGATCTGAAGACG
GCCATAGAAAAAATCACCCAGAGAGGAGGGCTTTCTAATGTAGGCCGGGCCATCTCCTTTGTGA
CCAAGAACTTCTTTTCCAAATCCAATGGAAACAGAGGCGGTGCTCCCAACGTGGCCGTGGTGAT
GGTGGACGGCTGGCCTACGGACAAGGTGGAGGAGGCATCAAGGCTTGCAAGAGAGTCAGGAATC
AATATTTTCTTCATCACCATTGAAGGTGCGGTGGAAAATGAGAAGCAATATGTGCTGGAGCCCA
ACTTTGCAAACAAGGCTGTGTGCAGAACCAACGGCTTCTACTCACTCAATGTGCAGAACTGGTA
CGGCCTCCACAAGAGCGTGCAGCCCCTGGTGAAGCGGGTCTGTGACACCGACCGGCTGGCCTGC
AGCAAGACCTGCCTGAACTCAGCCGACATCGGCTTCGTCATCGACGGCTCCAGCAGCGTGGGGA
CAGGCAACTTCCGCACTGTCCTCCAGTTTGTGGCCAACCTCAGCAAGGAGTTTGACATTTCTGA
CACGGACACGCGGGTCGGGGCCGTGCAATACACCTACGAGCAGCGGCTAGAGTTTGGATTTGAC
CAGTATACCACCAAGCCCGACGTCCTCAACGCCATCAAGAGGGTGGGGTATTGGAGCGGTGGGA
CCAGCACCGGGGCTGCCATCAACTATGCCCTAGAACAGCTCTTCAAGAAGTCCAAGCCCAACAA
GAGGAAGTTAATGATTCTCATCACGGACGGGAGGTCCTACGACGACGTCCGGATACCGGCCATG
GTTGCGCATCACAAGGGTGTGATCACCTACGCAATAGGCGTGGCATGGGCTGCACAGGAGGAGC
TGGAAATCATCGCCACTCACCCTGCCAGGGACCATGCCTTCTTTGTGGACGAGTTTGACAACCT
CTACAAATCCGTGCCCAAGATCATCCAGAACATTTGTACAGAGTTCAACTCACAGCCTCGGAAC
TGAATTCAGAGCAGGCAAAGCACCAGCAAGAGCTGCTTTCCCAACCAGCTCTGGGACAACCCCC
AACGCTTTATGGGACGCACGTGGGGCAGCAAGGCACGCAGGGCTTGGAAGGATGTCTTGTTATT
ATTCTTTGCCAGTGTGGTTTTTCAGACTTCAAGACTTGGAGTTAGAAAGATGATCATAAATGTG
TAGAATGAGCCAAAATGATAGGTCATTTTGGGAGTGCTGGGGATTTTAATTTTGAGAATTGTTT
TTAAAGTAAGTATTGAGACTAGAATGCAGCACTTATGACAGGCTTAAGTAGAGTTTTTGTGAGA
TTTTTCACATTTTTATTTCCCCTTGGAATTCTGTAACTCTCCACAAGTTCATTTTTGTCATGAC
AGTAGAGAAGTCGATTAATTAAATGTTTGAAAGGATTTTGTGCAA

hide sequence

RefSeq Acc Id:

XM_021087634 ⟹ XP_020943293

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	3	103,379,127 - 103,492,988 (-)	NCBI

Sequence:

show sequence

AAAAACCAGTGTGAGAAGCAGTGTGTGTGAGTGTGTGTGTGTGTGTGCGTGTGCGTGGTGTAAA
TGTGCTTTTCAAAGTGCTGAGAGGTTGATGGGAATGTTTGATTAGCTTCTCTCAGAAGAGAAAA
GGTGCTTGGACTTCTTGTTTCTTCTTTAGAATAATTTGGATGGGATTTGTGATGCAGAACAGCT
TAAGGAAAAAAGAATATCCATTCAGTGTGGTGGAAAATTTTTGAAAAAAAAATTTGCTGTCTTC
AAACAAGGTGTGTTGCGAAGACCTGACTCTGAGGGGGAAGGCCAAGGAGCTGACCTCATTATCA
AGGGTGCTGTTTTGATATTCATGGGGATTGTTGTCCTCACTATGAAGGCATCTGTTATTGAAAT
GTTCCTTGTTTTGCTGGTGACTGGAATACAGTCAAATAAAGAAATGACAAAGAAGATTAAAAGG
CCCAAATTCACTGTGCCTCAGATCAACTGCGATGTGAAAGCTGGAAAGATAATGAATCCTGAGT
TCTTGGTGAAGTGCCCAGCAGGATGCCAGGACCCTAGGTACCATGTCTATGGCACTGATGTCTA
TGCATCCTACTCCAGCGTGTGCGGTGCTGCAGTTCACAGTGGTGTGCTTGATAACTCAGGAGGG
AAAATACTTGTTCGGAAAGTTGCTGGACAGTCTGGCTACCACGGGAGTTATTCCAATGGAGTCT
GGTCATTATCCCTTCCACGATGGAGAGAATCATTTGTGGTCTCAGAAGGTAAACCCCAAAAGGG
TGTAACCTACCCATCGGCTCTTACATATTCATCATCTAAAAGCCCAGCTGCCAAAGCAGGTGAG
ACCACAAAAGCCTATCAGAGCCCATCAGTTCCAGGGACAACCGCACAGCCAGTCACCCTGATGC
AGGTACCGGGGACCACTGCAGTCGAAGCCACCCACACTGCCTTGTCAAAGCCATCCCCATCTGC
AGGCTTTACCACCAGCAGCCTCAGACTACAGCCTGTGGGCCAGAGAAGCCGGGAGCTGGGGGAG
GAACCTGACTTATGGAAACCTGGATCAGTCCTTCTAGATGCAGGATTTGTTCCAAAAGAAGAAT
TAAGCACACAGTCTTTGGAGCCAGTATCCCAGGGAGATCCAAGCTGCAAAGTCGACCTGTCGTT
TTTGATCGATGGGAGCTCAAGCATCGGCAAACGGCGATTCCGAATCCAGAAGCAGTTCCTGGCC
GACGTTGCCCAAGCTCTCGACATCGGCCCTGCTGGTCCACTGATGGGCGTTGTTCAGTACGGAG
ACAACCCTGCTACCCAATTTAATCTCAAGACTCACATGAATTCCCGGGATCTGAAGACGGCCAT
AGAAAAAATCACCCAGAGAGGAGGGCTTTCTAATGTAGGCCGGGCCATCTCCTTTGTGACCAAG
AACTTCTTTTCCAAATCCAATGGAAACAGAGGCGGTGCTCCCAACGTGGCCGTGGTGATGGTGG
ACGGCTGGCCTACGGACAAGGTGGAGGAGGCATCAAGGCTTGCAAGAGAGTCAGGAATCAATAT
TTTCTTCATCACCATTGAAGGTGCGGTGGAAAATGAGAAGCAATATGTGCTGGAGCCCAACTTT
GCAAACAAGGCTGTGTGCAGAACCAACGGCTTCTACTCACTCAATGTGCAGAACTGGTACGGCC
TCCACAAGAGCGTGCAGCCCCTGGTGAAGCGGGTCTGTGACACCGACCGGCTGGCCTGCAGCAA
GACCTGCCTGAACTCAGCCGACATCGGCTTCGTCATCGACGGCTCCAGCAGCGTGGGGACAGGC
AACTTCCGCACTGTCCTCCAGTTTGTGGCCAACCTCAGCAAGGAGTTTGACATTTCTGACACGG
ACACGCGGGTCGGGGCCGTGCAATACACCTACGAGCAGCGGCTAGAGTTTGGATTTGACCAGTA
TACCACCAAGCCCGACGTCCTCAACGCCATCAAGAGGGTGGGGTATTGGAGCGGTGGGACCAGC
ACCGGGGCTGCCATCAACTATGCCCTAGAACAGCTCTTCAAGAAGTCCAAGCCCAACAAGAGGA
AGTTAATGATTCTCATCACGGACGGGAGGTCCTACGACGACGTCCGGATACCGGCCATGGTTGC
GCATCACAAGGGTGTGATCACCTACGCAATAGGCGTGGCATGGGCTGCACAGGAGGAGCTGGAA
ATCATCGCCACTCACCCTGCCAGGGACCATGCCTTCTTTGTGGACGAGTTTGACAACCTCTACA
AATCCGTGCCCAAGATCATCCAGAACATTTGTACAGAGTTCAACTCACAGCCTCGGAACTGAAT
TCAGAGCAGGCAAAGCACCAGCAAGAGCTGCTTTCCCAACCAGCTCTGGGACAACCCCCAACGC
TTTATGGGACGCACGTGGGGCAGCAAGGCACGCAGGGCTTGGAAGGATGTCTTGTTATTATTCT
TTGCCAGTGTGGTTTTTCAGACTTCAAGACTTGGAGTTAGAAAGATGATCATAAATGTGTAGAA
TGAGCCAAAATGATAGGTCATTTTGGGAGTGCTGGGGATTTTAATTTTGAGAATTGTTTTTAAA
GTAAGTATTGAGACTAGAATGCAGCACTTATGACAGGCTTAAGTAGAGTTTTTGTGAGATTTTT
CACATTTTTATTTCCCCTTGGAATTCTGTAACTCTCCACAAGTTCATTTTTGTCATGACAGTAG
AGAAGTCGATTAATTAAATGTTTGAAAGGATTTTGTGCAA

hide sequence

RefSeq Acc Id:

XM_021087635 ⟹ XP_020943294

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	3	103,379,127 - 103,492,989 (-)	NCBI

Sequence:

show sequence

TAAAAACCAGTGTGAGAAGCAGTGTGTGTGAGTGTGTGTGTGTGTGTGCGTGTGCGTGGTGTAA
ATGTGCTTTTCAAAGTGCTGAGAGGTTGATGGGAATGTTTGATTAGCTTCTCTCAGAAGAGAAA
AGGTGCTTGGACTTCTTGTTTCTTCTTTAGAATAATTTGGATGGGATTTGTGATGCAGAACAGC
TTAAGGAAAAAAGAATATCCATTCAGTGTGGTGGAAAATTTTTGAAAAAAAAATTTGCTGTCTT
CAAACAAGGGTGCTGTTTTGATATTCATGGGGATTGTTGTCCTCACTATGAAGGCATCTGTTAT
TGAAATGTTCCTTGTTTTGCTGGTGACTGGAATACAGTCAAATAAAGAAATGACAAAGAAGATT
AAAAGGCCCAAATTCACTGTGCCTCAGATCAACTGCGATGTGAAAGCTGGAAAGATAATGAATC
CTGAGTTCTTGGTGAAGTGCCCAGCAGGATGCCAGGACCCTAGGTACCATGTCTATGGCACTGA
TGTCTATGCATCCTACTCCAGCGTGTGCGGTGCTGCAGTTCACAGTGGTGTGCTTGATAACTCA
GGAGGGAAAATACTTGTTCGGAAAGTTGCTGGACAGTCTGGCTACCACGGGAGTTATTCCAATG
GAGTCTGGTCATTATCCCTTCCACGATGGAGAGAATCATTTGTGGTCTCAGGTGAGACCACAAA
AGCCTATCAGAGCCCATCAGTTCCAGGGACAACCGCACAGCCAGTCACCCTGATGCAGGTACCG
GGGACCACTGCAGTCGAAGCCACCCACACTGCCTTGTCAAAGCCATCCCCATCTGCAGGCTTTA
CCACCAGCAGCCTCAGACTACAGCCTGTGGGCCAGAGAAGCCGGGAGCTGGGGGAGGAACCTGA
CTTATGGAAACCTGGATCAGTCCTTCTAGATGCAGGATTTGTTCCAAAAGAAGAATTAAGCACA
CAGTCTTTGGAGCCAGTATCCCAGGGAGATCCAAGCTGCAAAGTCGACCTGTCGTTTTTGATCG
ATGGGAGCTCAAGCATCGGCAAACGGCGATTCCGAATCCAGAAGCAGTTCCTGGCCGACGTTGC
CCAAGCTCTCGACATCGGCCCTGCTGGTCCACTGATGGGCGTTGTTCAGTACGGAGACAACCCT
GCTACCCAATTTAATCTCAAGACTCACATGAATTCCCGGGATCTGAAGACGGCCATAGAAAAAA
TCACCCAGAGAGGAGGGCTTTCTAATGTAGGCCGGGCCATCTCCTTTGTGACCAAGAACTTCTT
TTCCAAATCCAATGGAAACAGAGGCGGTGCTCCCAACGTGGCCGTGGTGATGGTGGACGGCTGG
CCTACGGACAAGGTGGAGGAGGCATCAAGGCTTGCAAGAGAGTCAGGAATCAATATTTTCTTCA
TCACCATTGAAGGTGCGGTGGAAAATGAGAAGCAATATGTGCTGGAGCCCAACTTTGCAAACAA
GGCTGTGTGCAGAACCAACGGCTTCTACTCACTCAATGTGCAGAACTGGTACGGCCTCCACAAG
AGCGTGCAGCCCCTGGTGAAGCGGGTCTGTGACACCGACCGGCTGGCCTGCAGCAAGACCTGCC
TGAACTCAGCCGACATCGGCTTCGTCATCGACGGCTCCAGCAGCGTGGGGACAGGCAACTTCCG
CACTGTCCTCCAGTTTGTGGCCAACCTCAGCAAGGAGTTTGACATTTCTGACACGGACACGCGG
GTCGGGGCCGTGCAATACACCTACGAGCAGCGGCTAGAGTTTGGATTTGACCAGTATACCACCA
AGCCCGACGTCCTCAACGCCATCAAGAGGGTGGGGTATTGGAGCGGTGGGACCAGCACCGGGGC
TGCCATCAACTATGCCCTAGAACAGCTCTTCAAGAAGTCCAAGCCCAACAAGAGGAAGTTAATG
ATTCTCATCACGGACGGGAGGTCCTACGACGACGTCCGGATACCGGCCATGGTTGCGCATCACA
AGGGTGTGATCACCTACGCAATAGGCGTGGCATGGGCTGCACAGGAGGAGCTGGAAATCATCGC
CACTCACCCTGCCAGGGACCATGCCTTCTTTGTGGACGAGTTTGACAACCTCTACAAATCCGTG
CCCAAGATCATCCAGAACATTTGTACAGAGTTCAACTCACAGCCTCGGAACTGAATTCAGAGCA
GGCAAAGCACCAGCAAGAGCTGCTTTCCCAACCAGCTCTGGGACAACCCCCAACGCTTTATGGG
ACGCACGTGGGGCAGCAAGGCACGCAGGGCTTGGAAGGATGTCTTGTTATTATTCTTTGCCAGT
GTGGTTTTTCAGACTTCAAGACTTGGAGTTAGAAAGATGATCATAAATGTGTAGAATGAGCCAA
AATGATAGGTCATTTTGGGAGTGCTGGGGATTTTAATTTTGAGAATTGTTTTTAAAGTAAGTAT
TGAGACTAGAATGCAGCACTTATGACAGGCTTAAGTAGAGTTTTTGTGAGATTTTTCACATTTT
TATTTCCCCTTGGAATTCTGTAACTCTCCACAAGTTCATTTTTGTCATGACAGTAGAGAAGTCG
ATTAATTAAATGTTTGAAAGGATTTTGTGCAA

hide sequence

RefSeq Acc Id:

XM_021087636 ⟹ XP_020943295

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	3	103,379,127 - 103,492,988 (-)	NCBI

Sequence:

show sequence

AAAAACCAGTGTGAGAAGCAGTGTGTGTGAGTGTGTGTGTGTGTGTGCGTGTGCGTGGTGTAAA
TGTGCTTTTCAAAGTGCTGAGAGGTTGATGGGAATGTTTGATTAGCTTCTCTCAGAAGAGAAAA
GGTGCTTGGACTTCTTGTTTCTTCTTTAGAATAATTTGGATGGGATTTGTGATGCAGAACAGCT
TAAGGAAAAAAGAATATCCATTCAGTGTGGTGGAAAATTTTTGAAAAAAAAATTTGCTGTCTTC
AAACAAGGGTGCTGTTTTGATATTCATGGGGATTGTTGTCCTCACTATGAAGGCATCTGTTATT
GAAATGTTCCTTGTTTTGCTGGTGACTGGAATACAGTCAAATAAAGAAATGACAAAGAAGATTA
AAAGGCCCAAATTCACTGTGCCTCAGATCAACTGCGATGTGAAAGCTGGAAAGATAATGAATCC
TGAGTTCTTGGTGAAGTGCCCAGCAGGATGCCAGGACCCTAGGTACCATGTCTATGGCACTGAT
GTCTATGCATCCTACTCCAGCGTGTGCGGTGCTGCAGTTCACAGTGGTGTGCTTGATAACTCAG
GAGGGAAAATACTTGTTCGGAAAGTTGCTGGACAGTCTGGCTACCACGGGAGTTATTCCAATGG
AGTCTGGTCATTATCCCTTCCACGATGGAGAGAATCATTTGTGGTCTCAGGGGAGGAACCTGAC
TTATGGAAACCTGGATCAGTCCTTCTAGATGCAGGATTTGTTCCAAAAGAAGAATTAAGCACAC
AGTCTTTGGAGCCAGTATCCCAGGGAGATCCAAGCTGCAAAGTCGACCTGTCGTTTTTGATCGA
TGGGAGCTCAAGCATCGGCAAACGGCGATTCCGAATCCAGAAGCAGTTCCTGGCCGACGTTGCC
CAAGCTCTCGACATCGGCCCTGCTGGTCCACTGATGGGCGTTGTTCAGTACGGAGACAACCCTG
CTACCCAATTTAATCTCAAGACTCACATGAATTCCCGGGATCTGAAGACGGCCATAGAAAAAAT
CACCCAGAGAGGAGGGCTTTCTAATGTAGGCCGGGCCATCTCCTTTGTGACCAAGAACTTCTTT
TCCAAATCCAATGGAAACAGAGGCGGTGCTCCCAACGTGGCCGTGGTGATGGTGGACGGCTGGC
CTACGGACAAGGTGGAGGAGGCATCAAGGCTTGCAAGAGAGTCAGGAATCAATATTTTCTTCAT
CACCATTGAAGGTGCGGTGGAAAATGAGAAGCAATATGTGCTGGAGCCCAACTTTGCAAACAAG
GCTGTGTGCAGAACCAACGGCTTCTACTCACTCAATGTGCAGAACTGGTACGGCCTCCACAAGA
GCGTGCAGCCCCTGGTGAAGCGGGTCTGTGACACCGACCGGCTGGCCTGCAGCAAGACCTGCCT
GAACTCAGCCGACATCGGCTTCGTCATCGACGGCTCCAGCAGCGTGGGGACAGGCAACTTCCGC
ACTGTCCTCCAGTTTGTGGCCAACCTCAGCAAGGAGTTTGACATTTCTGACACGGACACGCGGG
TCGGGGCCGTGCAATACACCTACGAGCAGCGGCTAGAGTTTGGATTTGACCAGTATACCACCAA
GCCCGACGTCCTCAACGCCATCAAGAGGGTGGGGTATTGGAGCGGTGGGACCAGCACCGGGGCT
GCCATCAACTATGCCCTAGAACAGCTCTTCAAGAAGTCCAAGCCCAACAAGAGGAAGTTAATGA
TTCTCATCACGGACGGGAGGTCCTACGACGACGTCCGGATACCGGCCATGGTTGCGCATCACAA
GGGTGTGATCACCTACGCAATAGGCGTGGCATGGGCTGCACAGGAGGAGCTGGAAATCATCGCC
ACTCACCCTGCCAGGGACCATGCCTTCTTTGTGGACGAGTTTGACAACCTCTACAAATCCGTGC
CCAAGATCATCCAGAACATTTGTACAGAGTTCAACTCACAGCCTCGGAACTGAATTCAGAGCAG
GCAAAGCACCAGCAAGAGCTGCTTTCCCAACCAGCTCTGGGACAACCCCCAACGCTTTATGGGA
CGCACGTGGGGCAGCAAGGCACGCAGGGCTTGGAAGGATGTCTTGTTATTATTCTTTGCCAGTG
TGGTTTTTCAGACTTCAAGACTTGGAGTTAGAAAGATGATCATAAATGTGTAGAATGAGCCAAA
ATGATAGGTCATTTTGGGAGTGCTGGGGATTTTAATTTTGAGAATTGTTTTTAAAGTAAGTATT
GAGACTAGAATGCAGCACTTATGACAGGCTTAAGTAGAGTTTTTGTGAGATTTTTCACATTTTT
ATTTCCCCTTGGAATTCTGTAACTCTCCACAAGTTCATTTTTGTCATGACAGTAGAGAAGTCGA
TTAATTAAATGTTTGAAAGGATTTTGTGCAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_013851673	(Get FASTA)	NCBI Sequence Viewer
	XP_013851674	(Get FASTA)	NCBI Sequence Viewer
	XP_020943293	(Get FASTA)	NCBI Sequence Viewer
	XP_020943294	(Get FASTA)	NCBI Sequence Viewer
	XP_020943295	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000023843
	ENSSSCP00000023843.3
	ENSSSCP00000047021.2
	ENSSSCP00000064707.1
	ENSSSCP00000065372
	ENSSSCP00000065372.1
	ENSSSCP00005029522.1
	ENSSSCP00005029536.1
	ENSSSCP00005029596.1
	ENSSSCP00005029651.1
	ENSSSCP00005029666.1
	ENSSSCP00015028904.1
	ENSSSCP00015029003.1
	ENSSSCP00015029149.1
	ENSSSCP00015029199.1
	ENSSSCP00015029258.1
	ENSSSCP00015029290.1
	ENSSSCP00025035795.1
	ENSSSCP00025035923.1
	ENSSSCP00025036061.1
	ENSSSCP00025036191.1
	ENSSSCP00025036327.1
	ENSSSCP00025036431.1
	ENSSSCP00030003007.1
	ENSSSCP00030003008.1
	ENSSSCP00030003011.1
	ENSSSCP00030003013.1
	ENSSSCP00030003022.1
	ENSSSCP00030003024.1
	ENSSSCP00035045058.1
	ENSSSCP00035045084.1
	ENSSSCP00035045139.1
	ENSSSCP00035045159.1
	ENSSSCP00035045176.1
	ENSSSCP00035045272.1
	ENSSSCP00035045323.1
	ENSSSCP00040003257.1
	ENSSSCP00040003262.1
	ENSSSCP00040003264.1
	ENSSSCP00040003270.1
	ENSSSCP00040003282.1
	ENSSSCP00040003288.1
	ENSSSCP00045019756.1
	ENSSSCP00045019821.1
	ENSSSCP00045019872.1
	ENSSSCP00045019918.1
	ENSSSCP00045020011.1
	ENSSSCP00045020075.1
	ENSSSCP00050026352.1
	ENSSSCP00055016060.1
	ENSSSCP00055016102.1
	ENSSSCP00055016136.1
	ENSSSCP00055016161.1
	ENSSSCP00055016223.1
	ENSSSCP00055016258.1
	ENSSSCP00060032271.1
	ENSSSCP00060032277.1
	ENSSSCP00065024165.1
	ENSSSCP00065024169.1
	ENSSSCP00065024170.1
	ENSSSCP00065024172.1
	ENSSSCP00065024179.1
	ENSSSCP00065024182.1
	ENSSSCP00065024184.1
	ENSSSCP00070010335.1
	ENSSSCP00070010338.1
	ENSSSCP00070010345.1

RefSeq Acc Id:	XP_020943294 ⟸ XM_021087635
- Peptide Label:	isoform X2
- UniProtKB:	A0A8D0SU59 (UniProtKB/TrEMBL), A0A8D1BEI5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGIVVLTMKASVIEMFLVLLVTGIQSNKEMTKKIKRPKFTVPQINCDVKAGKIMNPEFLVKCPA GCQDPRYHVYGTDVYASYSSVCGAAVHSGVLDNSGGKILVRKVAGQSGYHGSYSNGVWSLSLPR WRESFVVSGETTKAYQSPSVPGTTAQPVTLMQVPGTTAVEATHTALSKPSPSAGFTTSSLRLQP VGQRSRELGEEPDLWKPGSVLLDAGFVPKEELSTQSLEPVSQGDPSCKVDLSFLIDGSSSIGKR RFRIQKQFLADVAQALDIGPAGPLMGVVQYGDNPATQFNLKTHMNSRDLKTAIEKITQRGGLSN VGRAISFVTKNFFSKSNGNRGGAPNVAVVMVDGWPTDKVEEASRLARESGINIFFITIEGAVEN EKQYVLEPNFANKAVCRTNGFYSLNVQNWYGLHKSVQPLVKRVCDTDRLACSKTCLNSADIGFV IDGSSSVGTGNFRTVLQFVANLSKEFDISDTDTRVGAVQYTYEQRLEFGFDQYTTKPDVLNAIK RVGYWSGGTSTGAAINYALEQLFKKSKPNKRKLMILITDGRSYDDVRIPAMVAHHKGVITYAIG VAWAAQEELEIIATHPARDHAFFVDEFDNLYKSVPKIIQNICTEFNSQPRN hide sequence

RefSeq Acc Id:	XP_020943295 ⟸ XM_021087636
- Peptide Label:	isoform X4
- UniProtKB:	A0A8D1BES0 (UniProtKB/TrEMBL), A0A8D1VZ39 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGIVVLTMKASVIEMFLVLLVTGIQSNKEMTKKIKRPKFTVPQINCDVKAGKIMNPEFLVKCPA GCQDPRYHVYGTDVYASYSSVCGAAVHSGVLDNSGGKILVRKVAGQSGYHGSYSNGVWSLSLPR WRESFVVSGEEPDLWKPGSVLLDAGFVPKEELSTQSLEPVSQGDPSCKVDLSFLIDGSSSIGKR RFRIQKQFLADVAQALDIGPAGPLMGVVQYGDNPATQFNLKTHMNSRDLKTAIEKITQRGGLSN VGRAISFVTKNFFSKSNGNRGGAPNVAVVMVDGWPTDKVEEASRLARESGINIFFITIEGAVEN EKQYVLEPNFANKAVCRTNGFYSLNVQNWYGLHKSVQPLVKRVCDTDRLACSKTCLNSADIGFV IDGSSSVGTGNFRTVLQFVANLSKEFDISDTDTRVGAVQYTYEQRLEFGFDQYTTKPDVLNAIK RVGYWSGGTSTGAAINYALEQLFKKSKPNKRKLMILITDGRSYDDVRIPAMVAHHKGVITYAIG VAWAAQEELEIIATHPARDHAFFVDEFDNLYKSVPKIIQNICTEFNSQPRN hide sequence

RefSeq Acc Id:	XP_013851674 ⟸ XM_013996220
- Peptide Label:	isoform X3
- UniProtKB:	A0A480QV10 (UniProtKB/TrEMBL), A0A8D0P6U2 (UniProtKB/TrEMBL), A0A8D1BES0 (UniProtKB/TrEMBL), A0A8D1VZ39 (UniProtKB/TrEMBL), A0A8D0VAK5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGIVVLTMKASVIEMFLVLLVTGIQSNKEMTKKIKRPKFTVPQINCDVKAGKIMNPEFLVKCPA GCQDPRYHVYGTDVYASYSSVCGAAVHSGVLDNSGGKILVRKVAGQSGYHGSYSNGVWSLSLPR WRESFVVSEGKPQKGVTYPSALTYSSSKSPAAKAGEEPDLWKPGSVLLDAGFVPKEELSTQSLE PVSQGDPSCKVDLSFLIDGSSSIGKRRFRIQKQFLADVAQALDIGPAGPLMGVVQYGDNPATQF NLKTHMNSRDLKTAIEKITQRGGLSNVGRAISFVTKNFFSKSNGNRGGAPNVAVVMVDGWPTDK VEEASRLARESGINIFFITIEGAVENEKQYVLEPNFANKAVCRTNGFYSLNVQNWYGLHKSVQP LVKRVCDTDRLACSKTCLNSADIGFVIDGSSSVGTGNFRTVLQFVANLSKEFDISDTDTRVGAV QYTYEQRLEFGFDQYTTKPDVLNAIKRVGYWSGGTSTGAAINYALEQLFKKSKPNKRKLMILIT DGRSYDDVRIPAMVAHHKGVITYAIGVAWAAQEELEIIATHPARDHAFFVDEFDNLYKSVPKII QNICTEFNSQPRN hide sequence

RefSeq Acc Id:	XP_013851673 ⟸ XM_013996219
- Peptide Label:	isoform X1
- UniProtKB:	A0A481AEM6 (UniProtKB/TrEMBL), A0A8D1YQN1 (UniProtKB/TrEMBL), A0A8D1D5B7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGIVVLTMKASVIEMFLVLLVTGIQSNKEMTKKIKRPKFTVPQINCDVKAGKIMNPEFLVKCPA GCQDPRYHVYGTDVYASYSSVCGAAVHSGVLDNSGGKILVRKVAGQSGYHGSYSNGVWSLSLPR WRESFVVSEGKPQKGVTYPSALTYSSSKSPAAKAGETTKAYQSPSVPGTTAQPVTLMQVPGTTA VEATHTALSKPSPSAGFTTSSLRLQPVGQRSRELGEEPDLWKPGSVLLDAGFVPKEELSTQSLE PVSQGDPSCKVDLSFLIDGSSSIGKRRFRIQKQFLADVAQALDIGPAGPLMGVVQYGDNPATQF NLKTHMNSRDLKTAIEKITQRGGLSNVGRAISFVTKNFFSKSNGNRGGAPNVAVVMVDGWPTDK VEEASRLARESGINIFFITIEGAVENEKQYVLEPNFANKAVCRTNGFYSLNVQNWYGLHKSVQP LVKRVCDTDRLACSKTCLNSADIGFVIDGSSSVGTGNFRTVLQFVANLSKEFDISDTDTRVGAV QYTYEQRLEFGFDQYTTKPDVLNAIKRVGYWSGGTSTGAAINYALEQLFKKSKPNKRKLMILIT DGRSYDDVRIPAMVAHHKGVITYAIGVAWAAQEELEIIATHPARDHAFFVDEFDNLYKSVPKII QNICTEFNSQPRN hide sequence

RefSeq Acc Id:	XP_020943293 ⟸ XM_021087634
- Peptide Label:	isoform X1
- UniProtKB:	A0A481AEM6 (UniProtKB/TrEMBL), A0A8D1YQN1 (UniProtKB/TrEMBL), A0A8D1D5B7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGIVVLTMKASVIEMFLVLLVTGIQSNKEMTKKIKRPKFTVPQINCDVKAGKIMNPEFLVKCPA GCQDPRYHVYGTDVYASYSSVCGAAVHSGVLDNSGGKILVRKVAGQSGYHGSYSNGVWSLSLPR WRESFVVSEGKPQKGVTYPSALTYSSSKSPAAKAGETTKAYQSPSVPGTTAQPVTLMQVPGTTA VEATHTALSKPSPSAGFTTSSLRLQPVGQRSRELGEEPDLWKPGSVLLDAGFVPKEELSTQSLE PVSQGDPSCKVDLSFLIDGSSSIGKRRFRIQKQFLADVAQALDIGPAGPLMGVVQYGDNPATQF NLKTHMNSRDLKTAIEKITQRGGLSNVGRAISFVTKNFFSKSNGNRGGAPNVAVVMVDGWPTDK VEEASRLARESGINIFFITIEGAVENEKQYVLEPNFANKAVCRTNGFYSLNVQNWYGLHKSVQP LVKRVCDTDRLACSKTCLNSADIGFVIDGSSSVGTGNFRTVLQFVANLSKEFDISDTDTRVGAV QYTYEQRLEFGFDQYTTKPDVLNAIKRVGYWSGGTSTGAAINYALEQLFKKSKPNKRKLMILIT DGRSYDDVRIPAMVAHHKGVITYAIGVAWAAQEELEIIATHPARDHAFFVDEFDNLYKSVPKII QNICTEFNSQPRN hide sequence

RefSeq Acc Id:

ENSSSCP00000065372 ⟸ ENSSSCT00000088489

RefSeq Acc Id:

ENSSSCP00000047021 ⟸ ENSSSCT00000058017

RefSeq Acc Id:

ENSSSCP00000009067 ⟸ ENSSSCT00000009303

RefSeq Acc Id:

ENSSSCP00000023843 ⟸ ENSSSCT00000023727

RefSeq Acc Id:

ENSSSCP00000064707 ⟸ ENSSSCT00000072859

Protein Domains

LCCL VWFA

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000008501	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00005030243	UniProtKB/TrEMBL
	ENSSSCG00015053829	UniProtKB/TrEMBL
	ENSSSCG00025060130	UniProtKB/TrEMBL
	ENSSSCG00030004989	UniProtKB/TrEMBL
	ENSSSCG00035076984	UniProtKB/TrEMBL
	ENSSSCG00040006279	UniProtKB/TrEMBL
	ENSSSCG00045016760	UniProtKB/TrEMBL
	ENSSSCG00050045005	UniProtKB/TrEMBL
	ENSSSCG00055010350	UniProtKB/TrEMBL
	ENSSSCG00060054868	UniProtKB/TrEMBL
	ENSSSCG00065040642	UniProtKB/TrEMBL
	ENSSSCG00070006566	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000023727	ENTREZGENE
	ENSSSCT00000023727.4	UniProtKB/TrEMBL
	ENSSSCT00000058017.3	UniProtKB/TrEMBL
	ENSSSCT00000072859.1	UniProtKB/TrEMBL
	ENSSSCT00000088489	ENTREZGENE
	ENSSSCT00000088489.2	UniProtKB/TrEMBL
	ENSSSCT00005047982.1	UniProtKB/TrEMBL
	ENSSSCT00005047998.1	UniProtKB/TrEMBL
	ENSSSCT00005048077.1	UniProtKB/TrEMBL
	ENSSSCT00005048149.1	UniProtKB/TrEMBL
	ENSSSCT00005048168.1	UniProtKB/TrEMBL
	ENSSSCT00015072062.1	UniProtKB/TrEMBL
	ENSSSCT00015072321.1	UniProtKB/TrEMBL
	ENSSSCT00015072659.1	UniProtKB/TrEMBL
	ENSSSCT00015072807.1	UniProtKB/TrEMBL
	ENSSSCT00015072933.1	UniProtKB/TrEMBL
	ENSSSCT00015073000.1	UniProtKB/TrEMBL
	ENSSSCT00025082452.1	UniProtKB/TrEMBL
	ENSSSCT00025082697.1	UniProtKB/TrEMBL
	ENSSSCT00025082967.1	UniProtKB/TrEMBL
	ENSSSCT00025083222.1	UniProtKB/TrEMBL
	ENSSSCT00025083491.1	UniProtKB/TrEMBL
	ENSSSCT00025083733.1	UniProtKB/TrEMBL
	ENSSSCT00030006769.1	UniProtKB/TrEMBL
	ENSSSCT00030006771.1	UniProtKB/TrEMBL
	ENSSSCT00030006774.1	UniProtKB/TrEMBL
	ENSSSCT00030006776.1	UniProtKB/TrEMBL
	ENSSSCT00030006785.1	UniProtKB/TrEMBL
	ENSSSCT00030006789.1	UniProtKB/TrEMBL
	ENSSSCT00035105034.1	UniProtKB/TrEMBL
	ENSSSCT00035105078.1	UniProtKB/TrEMBL
	ENSSSCT00035105206.1	UniProtKB/TrEMBL
	ENSSSCT00035105240.1	UniProtKB/TrEMBL
	ENSSSCT00035105266.1	UniProtKB/TrEMBL
	ENSSSCT00035105432.1	UniProtKB/TrEMBL
	ENSSSCT00035105514.1	UniProtKB/TrEMBL
	ENSSSCT00040008295.1	UniProtKB/TrEMBL
	ENSSSCT00040008308.1	UniProtKB/TrEMBL
	ENSSSCT00040008313.1	UniProtKB/TrEMBL
	ENSSSCT00040008323.1	UniProtKB/TrEMBL
	ENSSSCT00040008352.1	UniProtKB/TrEMBL
	ENSSSCT00040008363.1	UniProtKB/TrEMBL
	ENSSSCT00045028572.1	UniProtKB/TrEMBL
	ENSSSCT00045028659.1	UniProtKB/TrEMBL
	ENSSSCT00045028724.1	UniProtKB/TrEMBL
	ENSSSCT00045028780.1	UniProtKB/TrEMBL
	ENSSSCT00045028902.1	UniProtKB/TrEMBL
	ENSSSCT00045028996.1	UniProtKB/TrEMBL
	ENSSSCT00050061283.1	UniProtKB/TrEMBL
	ENSSSCT00055020329.1	UniProtKB/TrEMBL
	ENSSSCT00055020382.1	UniProtKB/TrEMBL
	ENSSSCT00055020421.1	UniProtKB/TrEMBL
	ENSSSCT00055020448.1	UniProtKB/TrEMBL
	ENSSSCT00055020524.1	UniProtKB/TrEMBL
	ENSSSCT00055020572.1	UniProtKB/TrEMBL
	ENSSSCT00060074748.1	UniProtKB/TrEMBL
	ENSSSCT00060074763.1	UniProtKB/TrEMBL
	ENSSSCT00065055596.1	UniProtKB/TrEMBL
	ENSSSCT00065055605.1	UniProtKB/TrEMBL
	ENSSSCT00065055608.1	UniProtKB/TrEMBL
	ENSSSCT00065055610.1	UniProtKB/TrEMBL
	ENSSSCT00065055629.1	UniProtKB/TrEMBL
	ENSSSCT00065055634.1	UniProtKB/TrEMBL
	ENSSSCT00065055638.1	UniProtKB/TrEMBL
	ENSSSCT00070012566.1	UniProtKB/TrEMBL
	ENSSSCT00070012569.1	UniProtKB/TrEMBL
	ENSSSCT00070012578.1	UniProtKB/TrEMBL
Gene3D-CATH	2.170.130.20	UniProtKB/TrEMBL
	3.40.50.410	UniProtKB/TrEMBL
InterPro	LCCL	UniProtKB/TrEMBL
	LCCL_sf	UniProtKB/TrEMBL
	VWF_A	UniProtKB/TrEMBL
	vWFA_dom_sf	UniProtKB/TrEMBL
NCBI Gene	VIT	ENTREZGENE
PANTHER	COLLAGEN ALPHA	UniProtKB/TrEMBL
	LCCL DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_5G08630)	UniProtKB/TrEMBL
	LCCL DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_5G08630)	UniProtKB/TrEMBL
	VITRIN	UniProtKB/TrEMBL
Pfam	LCCL	UniProtKB/TrEMBL
	VWA	UniProtKB/TrEMBL
PRINTS	VWFADOMAIN	UniProtKB/TrEMBL
PROSITE	LCCL	UniProtKB/TrEMBL
	VWFA	UniProtKB/TrEMBL
SMART	LCCL	UniProtKB/TrEMBL
	VWA	UniProtKB/TrEMBL
Superfamily-SCOP	SSF53300	UniProtKB/TrEMBL
	SSF69848	UniProtKB/TrEMBL
UniProt	A0A287ASF5_PIG	UniProtKB/TrEMBL
	A0A480JSY9_PIG	UniProtKB/TrEMBL
	A0A480QV10	ENTREZGENE, UniProtKB/TrEMBL
	A0A481AEM6	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1T3H3_PIG	UniProtKB/TrEMBL
	A0A4X1T4N5_PIG	UniProtKB/TrEMBL
	A0A4X1T6D7_PIG	UniProtKB/TrEMBL
	A0A5G2QJP7_PIG	UniProtKB/TrEMBL
	A0A5G2R485_PIG	UniProtKB/TrEMBL
	A0A8D0JNG2_PIG	UniProtKB/TrEMBL
	A0A8D0P6I6_PIG	UniProtKB/TrEMBL
	A0A8D0P6U2	ENTREZGENE
	A0A8D0PB94_PIG	UniProtKB/TrEMBL
	A0A8D0SU59	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0VAK5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0VAL2_PIG	UniProtKB/TrEMBL
	A0A8D1B620_PIG	UniProtKB/TrEMBL
	A0A8D1BEI5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1BES0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1BXA4_PIG	UniProtKB/TrEMBL
	A0A8D1D5B7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1D5D4_PIG	UniProtKB/TrEMBL
	A0A8D1D5Q9_PIG	UniProtKB/TrEMBL
	A0A8D1HJ71_PIG	UniProtKB/TrEMBL
	A0A8D1KY09_PIG	UniProtKB/TrEMBL
	A0A8D1Q9Y5_PIG	UniProtKB/TrEMBL
	A0A8D1VZ39	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1YQN1	ENTREZGENE, UniProtKB/TrEMBL
	I3LID8_PIG	UniProtKB/TrEMBL
UniProt Secondary	A0A8D0JJ64	UniProtKB/TrEMBL
	A0A8D0P6U2	UniProtKB/TrEMBL
VGNC ID	VGNC:94830	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar