KIAA0319 (KIAA0319) - Rat Genome Database
Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: KIAA0319 (KIAA0319) Sus scrofa
Analyze
Symbol: KIAA0319
Name: KIAA0319
RGD ID: 14060172
Description: INVOLVED IN negative regulation of axon extension (ortholog); ASSOCIATED WITH dyslexia (ortholog); FOUND IN early endosome (inferred); integral component of membrane (inferred); intracellular membrane-bounded organelle (inferred)
Type: protein-coding
RefSeq Status: MODEL
Also known as: KIAA0319 ortholog; LOW QUALITY PROTEIN: dyslexia-associated protein KIAA0319 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl719,383,196 - 19,486,232 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1719,383,189 - 19,487,669 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2720,533,670 - 20,639,029 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
dyslexia  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
KIAA0319
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl719,383,196 - 19,486,232 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1719,383,189 - 19,487,669 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2720,533,670 - 20,639,029 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KIAA0319
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl624,544,104 - 24,646,191 (-)EnsemblGRCh38hg38GRCh38
GRCh38624,540,128 - 24,646,191 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37624,544,332 - 24,646,383 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36624,652,311 - 24,754,362 (-)NCBINCBI36hg18NCBI36
Celera625,777,709 - 25,879,725 (-)NCBI
Cytogenetic Map6p22.3NCBI
HuRef624,493,749 - 24,595,804 (-)NCBIHuRef
CHM1_1624,548,492 - 24,650,521 (-)NCBICHM1_1
D130043K22Rik
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391325,029,114 - 25,085,422 (+)NCBIGRCm39mm39
GRCm381324,845,131 - 24,901,439 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1324,845,135 - 24,901,270 (+)EnsemblGRCm38mm10GRCm38
MGSCv371324,937,000 - 24,993,139 (+)NCBIGRCm37mm9NCBIm37
MGSCv361324,852,596 - 24,908,735 (+)NCBImm8
Celera1325,075,796 - 25,131,935 (+)NCBICelera
Cytogenetic Map13A3.1NCBI
RGD1307443
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01742,163,245 - 42,226,725 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1742,165,817 - 42,226,377 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01744,031,044 - 44,094,370 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41747,226,680 - 47,287,240 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11747,230,128 - 47,279,391 (-)NCBI
Celera1739,802,603 - 39,862,958 (-)NCBICelera
Cytogenetic Map17p11NCBI
Kiaa0319
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554832,413,181 - 2,462,735 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554832,404,061 - 2,463,210 (+)NCBIChiLan1.0ChiLan1.0
KIAA0319
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1624,713,922 - 24,815,300 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl624,713,922 - 24,815,300 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0624,377,666 - 24,483,388 (-)NCBIMhudiblu_PPA_v0panPan3
KIAA0319
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl3522,591,353 - 22,652,292 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.13522,589,103 - 22,689,549 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Kiaa0319
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_004936671870,107 - 912,727 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIAA0319
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11747,603,506 - 47,702,154 (+)NCBI
ChlSab1.1 Ensembl1747,603,705 - 47,696,302 (+)Ensembl
Kiaa0319
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247562,377,573 - 2,464,766 (+)NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system endocrine system nervous system renal system reproductive system
High
Medium 1 9
Low 2 14 2
Below cutoff 8 2

Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000001187   ⟹   ENSSSCP00000001162
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl719,386,111 - 19,486,232 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000071486   ⟹   ENSSSCP00000066982
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl719,383,196 - 19,450,747 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000087274   ⟹   ENSSSCP00000071752
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl719,383,212 - 19,486,136 (-)Ensembl
RefSeq Acc Id: XM_005665630   ⟹   XP_005665687
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1719,383,189 - 19,487,669 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005665687 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005665687   ⟸   XM_005665630
- Sequence:
RefSeq Acc Id: ENSSSCP00000001162   ⟸   ENSSSCT00000001187
RefSeq Acc Id: ENSSSCP00000066982   ⟸   ENSSSCT00000071486
RefSeq Acc Id: ENSSSCP00000071752   ⟸   ENSSSCT00000087274
Protein Domains
MANSC   PKD


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000001091 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSSSCP00000001162 UniProtKB/TrEMBL
  ENSSSCP00000066982 UniProtKB/TrEMBL
  ENSSSCP00000071752 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000001187 UniProtKB/TrEMBL
  ENSSSCT00000071486 UniProtKB/TrEMBL
  ENSSSCT00000087274 ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro FN3_dom UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  KIAA0319-like UniProtKB/TrEMBL
  MANSC_dom UniProtKB/TrEMBL
  MANSC_N UniProtKB/TrEMBL
  PKD/Chitinase_dom UniProtKB/TrEMBL
  PKD/REJ-like UniProtKB/TrEMBL
  PKD_dom UniProtKB/TrEMBL
  PKD_dom_sf UniProtKB/TrEMBL
NCBI Gene KIAA0319 ENTREZGENE
PANTHER PTHR46182 UniProtKB/TrEMBL
Pfam REJ UniProtKB/TrEMBL
PROSITE MANSC UniProtKB/TrEMBL
  PKD UniProtKB/TrEMBL
SMART FN3 UniProtKB/TrEMBL
  MANEC UniProtKB/TrEMBL
  PKD UniProtKB/TrEMBL
Superfamily-SCOP SSF49299 UniProtKB/TrEMBL
UniProt A0A5G2QQH5_PIG UniProtKB/TrEMBL
  A0A5G2RC25_PIG UniProtKB/TrEMBL
  F1RUE2_PIG UniProtKB/TrEMBL
VGNC ID VGNC:89429 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-03-04 KIAA0319  KIAA0319  KIAA0319  KIAA0319 ortholog  Symbol and/or name change 5135510 APPROVED