ZNF672 (zinc finger protein 672) - Rat Genome Database

Name: ZNF672
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: ZNF672 (zinc finger protein 672) Sus scrofa

Analyze

Symbol:

ZNF672

Name:

zinc finger protein 672

RGD ID:

14059206

Description:

ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (inferred); ASSOCIATED WITH developmental and epileptic encephalopathy 54 (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ZNF672 (zinc finger protein 672)	HGNC	EggNOG, Ensembl, Inparanoid, NCBI, OMA, OrthoDB, Treefam
Mus musculus (house mouse):	Zfp672 (zinc finger protein 672)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Zfp672 (zinc finger protein 672)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ZNF672 (zinc finger protein 672)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ZNF672 (zinc finger protein 672)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Znf672 (zinc finger protein 672)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ZNF672 (zinc finger protein 672)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	ZNF425 (zinc finger protein 425)	HGNC	Panther

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	52,297,673 - 52,312,332 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	52,297,668 - 52,313,291 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	55,197,471 - 55,213,143 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

developmental and epileptic encephalopathy 54 (ISO)

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

regulation of transcription by RNA polymerase II (IBA)

Cellular Component

nucleoplasm (IEA)

nucleus (IBA)

Molecular Function

DNA-binding transcription factor activity, RNA polymerase II-specific (IBA)

DNA-binding transcription repressor activity, RNA polymerase II-specific (IEA)

protein binding (ISO)

RNA polymerase II transcription regulatory region sequence-specific DNA binding (IBA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

ZNF672
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	52,297,673 - 52,312,332 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	52,297,668 - 52,313,291 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	55,197,471 - 55,213,143 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZNF672
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	248,838,224 - 248,849,517 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	248,838,210 - 248,849,517 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	249,132,423 - 249,143,716 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	247,099,153 - 247,110,337 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	222,293,723 - 222,305,000 (+)	NCBI		Celera
Cytogenetic Map	1	q44	NCBI
HuRef	1	219,373,509 - 219,384,693 (+)	NCBI		HuRef
CHM1_1	1	250,404,823 - 250,416,007 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	248,276,707 - 248,288,000 (+)	NCBI		T2T-CHM13v2.0

Zfp672
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	58,205,940 - 58,221,197 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	58,205,940 - 58,221,165 (-)	Ensembl		GRCm39 Ensembl
GRCm38	11	58,315,114 - 58,330,368 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	58,315,114 - 58,330,339 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	58,128,616 - 58,136,848 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	58,131,411 - 58,139,308 (-)	NCBI		MGSCv36	mm8
Celera	11	63,066,218 - 63,074,462 (-)	NCBI		Celera
Cytogenetic Map	11	B1.3	NCBI
cM Map	11	36.19	NCBI

Zfp672
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	42,996,996 - 43,012,564 (-)	NCBI		GRCr8
mRatBN7.2	10	42,496,558 - 42,512,134 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	42,495,476 - 42,504,852 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	47,161,014 - 47,169,246 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	46,651,459 - 46,659,691 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	42,154,970 - 42,163,202 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	43,752,699 - 43,768,291 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	43,752,700 - 43,760,930 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	43,545,158 - 43,553,389 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	43,953,238 - 43,961,467 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	43,966,860 - 43,975,090 (-)	NCBI
Celera	10	41,787,599 - 41,795,829 (-)	NCBI		Celera
Cytogenetic Map	10	q22	NCBI

ZNF672
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	196,407 - 208,316 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	466,382 - 478,458 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	224,481,459 - 224,493,099 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3

ZNF672
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	16	13,737,061 - 13,746,042 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	16	13,740,839 - 13,744,765 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	16	11,463,306 - 11,471,460 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	16	13,715,104 - 13,723,257 (+)	NCBI		ROS_Cfam_1.0
UNSW_CanFamBas_1.0	16	13,249,359 - 13,257,504 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	16	13,425,715 - 13,433,899 (+)	NCBI		UU_Cfam_GSD_1.0

Znf672
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	91,871,031 - 91,879,908 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936609	593,730 - 602,586 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZNF672
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	85,680,462 - 85,690,951 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	85,688,714 - 85,690,072 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666055	88,308,841 - 88,319,404 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Variants

Variants in ZNF672
407 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium				2		1
Low	10	4	3	3	2	22	2	3	3
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003123597	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005661164	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005661165	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005661167	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005661168	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021083393	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021083394	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001306970	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002341583	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK235271	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK390433	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU972405	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01111450	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000015268 ⟹ ENSSSCP00000014862

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	52,297,673 - 52,312,332 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000064129 ⟹ ENSSSCP00000044516

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	52,297,675 - 52,312,215 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000068694 ⟹ ENSSSCP00000062875

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	52,297,673 - 52,305,974 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000077445 ⟹ ENSSSCP00000070961

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	52,297,662 - 52,303,894 (-)	Ensembl

RefSeq Acc Id:

XM_003123597 ⟹ XP_003123645

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	52,297,668 - 52,313,277 (-)	NCBI

Sequence:

show sequence

CAGAGTATGCGTCCATGTATATAAAGTCAAAACTATAAATTAGCCAATACTATTTATGGTATTG
GGGTTATGGTTACTCTTTGTATAGTAGAGACAAGAAGTGGTCCAAAAGGTTTTCTTGGGTTCTG
GTATATTCCATTTCATAATATGGGAGCTGGTTGCATAGGTTTGTTAGGAAAAGCCGGCAGAAAG
GCTTGCGGGATGGAAGTACAATGATTTAGGGGCAGAGCAGAGGGGCAGAAGCTCTGGATGGGTG
ACAGGATATGTGGTAACAAGTGACTTCAAAAGGAAGCTTAGAACTGGTAAAGAAGGGTCCTGAG
AACCATCATTTGGCAGCCCTGAAGAGGGAATGGTCTCCTTCCCTTGTGTTTCCAGAAAACAACA
CTAATAGCACATCTCAGTGGAACAAAACATTGCAGACAGCTCAGCCAGCAAGCTCTTGGAGCAA
CAGCTGGCCAGGAGTCCCCACAACCCGGGCAGTGAGACCCTGGATGGTCATTAACTTGTGGGTG
CCTCCAGTGGCAAGGCTGTGGCGAGGATTAAGCTAAGTCTGACCTCACCGTAAGAAATCATAAT
TTACTTGCAAGGACTAGTCAAATGGGTGGCCCCGAAAACTACTCCGCTCCGGGGACCACTACCC
CGACTGCAGCACCTGCAGGGACACCCTTTGGTGGCCAGTGGGCTCACGTAAGCCACAAGAACAT
CAAACCAGGGTACTGACTCCTCCACTGGGCACCCAGGCGGTGTGCAAGGTTCAATGCTTTTTCC
TCAGGGCGGGGAGTGGACAAAGGAGGAGGCAGGGATTGGTTAATCCTGAGAAGAAGGCGGGGCC
TTGACAAAGGAGGGAGGCAGGACCAGAGTCTCCCTGAGAGCCCATTAGCTCCGCCCCCTTAGTG
GGATTCCTGCCTGGGCCTGCAACTCTGAACCGTTAGAGGCGTTTTCTTTCGTTTCCTAGTTTTC
CCAGCAACCCGTGACGCAGCCAGCATGAGGCCGACCACTGGCCAACCCGGGAGAACGGGACTAG
AGCGTGACCCCCTATCACGAGACGCCTCGCAGCTCCCCCCAGTTGGCGGCCCAGCGCTCGGTCA
GGTCCTTCCCTTCGTTCCTCGTCCCAGTCCTCCAGTCCGGGAGGCGGGGTTCGGCGAGCCAGCT
GAGTGGGACCCTCGCGGTGTCCGAGGAGCTAGTCGGCGACCGGGTACAGCACATCCTGCTCCAG
AGGCATAGGAAGAGAACATTGTACATGTGCAATTCCCACCTAATGTGTCACTCCTGCCAAATGC
AGAGGGTAGCAGAAGCTCCAGAGCCCATACCTGCAGGACTCAGGCAAACCTCTCTGCTGGCCAC
CTTGAAAAGGCTGTAGCACCTGCCCCTGAGAGAAGGAACACTGGAATCTACAGACCAGTTTTCC
AGGCCTCCCCGTTTTCCCTTTGTTACCTTTCCAGGCCTTAAGAAAACTGAAAATAACTGTCAGC
TTGAGGACGTGGACCCTGGAGTGTGAGTGCCACACTGCACCCTGAGGGCTACCGGCCCAGCGCT
CACCATGTTTGCTGCATCAGAGGCAGGAGTGGGCAGGCCTTACACGTGCAGTGAATGTGGCAAG
AGCTTCCGCTACAGTTCAGTGCTGCTACGGCATGAGCGCGCCCATGGCAGTGATAGCCATTTGC
GCTGTCTAGAGTGTGGTGAGCATTGTGCACAGGCTGCAGACCTCCGTTCACACCGACGTGTCCA
TGCCGGCCAGACCCTCTATATCTGCAGCGAATGTGGCCAGAGCTTCCGCCACAGCGGCCGCCTT
GACCTGCACCAGAGTGTGCACAGGCGGCGTGGCCGCTCCTGCCGCTGCCGCACTTGTGGCCGTT
GCTTCCCACACCTCCCGGCCCTACTACTGCACAGGCGTCACTGGCACCCTCCCGAGCGGCCCTG
CCGCTGTCCTCTGTGCCCTCGCGCCTTCCGGCAGAGCGCCCTGCGTTTCCACCAAGCACGGGCG
CATCCCTGGGGGATACCAGCTGTGCCCACTGACACGCTCCACCACTGTACACAGTGCTCACGGG
TTTTCTGCAGTGGCGTGGGACTTCGGAGGCATTTGCGTGTCCACGTGGCCAGGAGCCCTGGTGA
CTCCACACTCCAGCAGCCAGCTACTCTGGACGCACACCAGTGTGGTGTGTGTGGCAAGAGCTTT
GCCAAGAGTTCCACGTTAACACGACATCTGCAGGCGCACTCAGGCGAGAAGCCTTTCAAATGCC
CTGAGTGCGGTAAGGGCTTCTTGGAGAGTGCCACGCTGGTGCGCCATCAGCGCACGCACACAGG
CGAGAAGCCCTATGCCTGTGGTGACTGTGGGCGCCGCTTTAGCGAAAGCTCAACACTGCTACGC
CATCGTCGCAGCCACCAGGGAGAGCGACCACATGCATGCGCCACGTGTGGCAAGGGCTTTGGTC
AGCGCTCCGACCTCATAGTGCACCAGCGCATCCATACGGGCGAAAGGCCCTTCCCATGTACTGA
GTGTGGCCGCTGCTTCAGCGACCGTTCAGACCTCACTAAGCACTGGCGCACACACACAGGCGAG
AAGCCTTATCGTTGTGAGCTGTGTGGCAAGCGCTTCACATGCGTGTCCAACCTCAACGTCCACT
TGCGCAATCACGCTGGCCACAAGCCCCACAAGTGCCCTGAATGTGGCAAAGCCTTCAGTGTGAG
CTCCAAGCTGGCCCTACACCGCAAGACACATCTGGGTGAGCGGCCAGCAGAATGTGCAGAGTGT
GGCAAATGCTTTAGCCACAGCCGCTCGCTGTCGCAGCACCAGCGGGCTCATACCCGTGCTCGTG
CAGCAACTACTGCTGCCACTGCCACTCAGGACAAGGCAAGCACTGCGCTCATCTTTGCTGAGCA
AGCAAGACAGGAAAAGCTGGGATTTTCTGTGCCTAAGTTTAAAGAGACTTGCTGAGAGATCTCC
CTGGAGTGGGCTGGATAAGCACTTATGTAGTGCCACAGGGCTGGTGGGGGCAACTGGCAGGTGG
AGGTCTGTGGAAAGACAGCATGGCCTGTTACCTTCCTACATCTCTGTTGATAGCCCCTTCACCT
GGCCTCTTGCTGTGCCCCTCATCTACTTGTTAGCTCTTTGCCTGTTCTCAATCCTTCCTTTTCC
CTCTCTGGGGAATAGGTGCAGGGGAAACCTCCCAGACCTCTCAGTGAAAGAATGCCCAAGTATT
GGTGTGTTGCATCCCTGCTGCTGTGCTCATATGTTTCCTGTTTTCCCACCAGTGTTCTGTCTTC
TCCCATCTCTTTTTTCAGCCTGAGTCTCCTCTACCTCTCCTTTCTGGGTACTTTCGGTATCCTT
CCTTTTCAGGTAATGATCACAGGCTTGGCCAGGGTCAAATTCCTGTGGTCTTCTTATCTCTGTA
GTCTTCTTGCCCTGTGGTCTTCTTGCCTCTTCCTTCTACTTGACTGTTAGTCTCTTTGCAGCTT
TCTCCCGTAGCTTCTGAGAGATGGGAAACTTGCAGAGAGATAGTGAGAGAGCTCACATCACTGA
AAGAGATCTCCATACCAGAAACAACCAAAGAAGTGTTTCACATCATGTAAAGGTGGGCAGGAGC
CCTCAGCATGGCACCTACCTGTCCTATGGGACAGATCTGCTGGTGTACAGATCAAGGTGCCTCT
CAGGACAATGTTCTCCAACCAGGTGGAGGACATTAGTCCTGGGACCTGGGCAAGACTACATGGG
TCCACAAAGCCAGGCACTGCCAACTAGAGTAAGAGAATGATATATACAAATCAAACTTGGAGCC
ATGGAGAAACTGAGCTCTACAGAGGCAACAGTGCAGGGTGGAAAATTACCTGGAATTGTCAGTG
ATTTTTTTTGTTTGCAGGTGGTGAAATAAAGAATTTGTTTGGTTCCAAA

hide sequence

RefSeq Acc Id:

XM_005661164 ⟹ XP_005661221

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	52,297,668 - 52,313,277 (-)	NCBI

Sequence:

show sequence

CAGAGTATGCGTCCATGTATATAAAGTCAAAACTATAAATTAGCCAATACTATTTATGGTATTG
GGGTTATGGTTACTCTTTGTATAGTAGAGACAAGAAGTGGTCCAAAAGGTTTTCTTGGGTTCTG
GTATATTCCATTTCATAATATGGGAGCTGGTTGCATAGGTTTGTTAGGAAAAGCCGGCAGAAAG
GCTTGCGGGATGGAAGTACAATGATTTAGGGGCAGAGCAGAGGGGCAGAAGCTCTGGATGGGTG
ACAGGATATGTGGTAACAAGTGACTTCAAAAGGAAGCTTAGAACTGGTAAAGAAGGGTCCTGAG
AACCATCATTTGGCAGCCCTGAAGAGGGAATGGTCTCCTTCCCTTGTGTTTCCAGAAAACAACA
CTAATAGCACATCTCAGTGGAACAAAACATTGCAGACAGCTCAGCCAGCAAGCTCTTGGAGCAA
CAGCTGGCCAGGAGTCCCCACAACCCGGGCAGTGAGACCCTGGATGGTCATTAACTTGTGGGTG
CCTCCAGTGGCAAGGCTGTGGCGAGGATTAAGCTAAGTCTGACCTCACCGTAAGAAATCATAAT
TTACTTGCAAGGACTAGTCAAATGGGTGGCCCCGAAAACTACTCCGCTCCGGGGACCACTACCC
CGACTGCAGCACCTGCAGGGACACCCTTTGGTGGCCAGTGGGCTCACGTAAGCCACAAGAACAT
CAAACCAGGGTACTGACTCCTCCACTGGGCACCCAGGCGGTGTGCAAGGTTCAATGCTTTTTCC
TCAGGGCGGGGAGTGGACAAAGGAGGAGGCAGGGATTGGTTAATCCTGAGAAGAAGGCGGGGCC
TTGACAAAGGAGGGAGGCAGGACCAGAGTCTCCCTGAGAGCCCATTAGCTCCGCCCCCTTAGTG
GGATTCCTGCCTGGGCCTGCAACTCTGAACCGTTAGAGGCGTTTTCTTTCGTTTCCTAGTTTTC
CCAGCAACCCGTGACGCAGCCAGCATGAGGCCGACCACTGGCCAACCCGGGAGAACGGGACTAG
AGCGTGACCCCCTATCACGAGACGCCTCGCAGCTCCCCCCAGTTGGCGGCCCAGCGCTCGGTCA
GGTCCTTCCCTTCGTTCCTCGTCCCAGTCCTCCAGTCCGGGAGGCGGGGTTCGGCGAGCCAGCT
GAGTGGGACCCTCGCGGTGTCCGAGGAGCTAGTCGGCGACCGGTGGGCTGGCTCTTTAAGGGCG
AAATTTCGCCCAAGGAGAATCTGACCAGCAACTCCTGAGGAAAACTGAGGCACCTGGGATTGGC
TGCACTTCGAGGGGACCAGGGAAGGCGACCTGCTCAGATTTCATCCTAGGCATAGACTCTTTCC
TTTCAGGGCAAGCTCCAACATGAGGCGAGGGTACAGCACATCCTGCTCCAGAGGCATAGGAAGA
GAACATTGTACATGTGCAATTCCCACCTAATGTGTCACTCCTGCCAAATGCAGAGGGTAGCAGA
AGCTCCAGAGCCCATACCTGCAGGACTCAGGCAAACCTCTCTGCTGGCCACCTTGAAAAGGCTG
TAGCACCTGCCCCTGAGAGAAGGAACACTGGAATCTACAGACCAGTTTTCCAGGCCTCCCCGTT
TTCCCTTTGTTACCTTTCCAGGCCTTAAGAAAACTGAAAATAACTGTCAGCTTGAGGACGTGGA
CCCTGGAGTGTGAGTGCCACACTGCACCCTGAGGGCTACCGGCCCAGCGCTCACCATGTTTGCT
GCATCAGAGGCAGGAGTGGGCAGGCCTTACACGTGCAGTGAATGTGGCAAGAGCTTCCGCTACA
GTTCAGTGCTGCTACGGCATGAGCGCGCCCATGGCAGTGATAGCCATTTGCGCTGTCTAGAGTG
TGGTGAGCATTGTGCACAGGCTGCAGACCTCCGTTCACACCGACGTGTCCATGCCGGCCAGACC
CTCTATATCTGCAGCGAATGTGGCCAGAGCTTCCGCCACAGCGGCCGCCTTGACCTGCACCAGA
GTGTGCACAGGCGGCGTGGCCGCTCCTGCCGCTGCCGCACTTGTGGCCGTTGCTTCCCACACCT
CCCGGCCCTACTACTGCACAGGCGTCACTGGCACCCTCCCGAGCGGCCCTGCCGCTGTCCTCTG
TGCCCTCGCGCCTTCCGGCAGAGCGCCCTGCGTTTCCACCAAGCACGGGCGCATCCCTGGGGGA
TACCAGCTGTGCCCACTGACACGCTCCACCACTGTACACAGTGCTCACGGGTTTTCTGCAGTGG
CGTGGGACTTCGGAGGCATTTGCGTGTCCACGTGGCCAGGAGCCCTGGTGACTCCACACTCCAG
CAGCCAGCTACTCTGGACGCACACCAGTGTGGTGTGTGTGGCAAGAGCTTTGCCAAGAGTTCCA
CGTTAACACGACATCTGCAGGCGCACTCAGGCGAGAAGCCTTTCAAATGCCCTGAGTGCGGTAA
GGGCTTCTTGGAGAGTGCCACGCTGGTGCGCCATCAGCGCACGCACACAGGCGAGAAGCCCTAT
GCCTGTGGTGACTGTGGGCGCCGCTTTAGCGAAAGCTCAACACTGCTACGCCATCGTCGCAGCC
ACCAGGGAGAGCGACCACATGCATGCGCCACGTGTGGCAAGGGCTTTGGTCAGCGCTCCGACCT
CATAGTGCACCAGCGCATCCATACGGGCGAAAGGCCCTTCCCATGTACTGAGTGTGGCCGCTGC
TTCAGCGACCGTTCAGACCTCACTAAGCACTGGCGCACACACACAGGCGAGAAGCCTTATCGTT
GTGAGCTGTGTGGCAAGCGCTTCACATGCGTGTCCAACCTCAACGTCCACTTGCGCAATCACGC
TGGCCACAAGCCCCACAAGTGCCCTGAATGTGGCAAAGCCTTCAGTGTGAGCTCCAAGCTGGCC
CTACACCGCAAGACACATCTGGGTGAGCGGCCAGCAGAATGTGCAGAGTGTGGCAAATGCTTTA
GCCACAGCCGCTCGCTGTCGCAGCACCAGCGGGCTCATACCCGTGCTCGTGCAGCAACTACTGC
TGCCACTGCCACTCAGGACAAGGCAAGCACTGCGCTCATCTTTGCTGAGCAAGCAAGACAGGAA
AAGCTGGGATTTTCTGTGCCTAAGTTTAAAGAGACTTGCTGAGAGATCTCCCTGGAGTGGGCTG
GATAAGCACTTATGTAGTGCCACAGGGCTGGTGGGGGCAACTGGCAGGTGGAGGTCTGTGGAAA
GACAGCATGGCCTGTTACCTTCCTACATCTCTGTTGATAGCCCCTTCACCTGGCCTCTTGCTGT
GCCCCTCATCTACTTGTTAGCTCTTTGCCTGTTCTCAATCCTTCCTTTTCCCTCTCTGGGGAAT
AGGTGCAGGGGAAACCTCCCAGACCTCTCAGTGAAAGAATGCCCAAGTATTGGTGTGTTGCATC
CCTGCTGCTGTGCTCATATGTTTCCTGTTTTCCCACCAGTGTTCTGTCTTCTCCCATCTCTTTT
TTCAGCCTGAGTCTCCTCTACCTCTCCTTTCTGGGTACTTTCGGTATCCTTCCTTTTCAGGTAA
TGATCACAGGCTTGGCCAGGGTCAAATTCCTGTGGTCTTCTTATCTCTGTAGTCTTCTTGCCCT
GTGGTCTTCTTGCCTCTTCCTTCTACTTGACTGTTAGTCTCTTTGCAGCTTTCTCCCGTAGCTT
CTGAGAGATGGGAAACTTGCAGAGAGATAGTGAGAGAGCTCACATCACTGAAAGAGATCTCCAT
ACCAGAAACAACCAAAGAAGTGTTTCACATCATGTAAAGGTGGGCAGGAGCCCTCAGCATGGCA
CCTACCTGTCCTATGGGACAGATCTGCTGGTGTACAGATCAAGGTGCCTCTCAGGACAATGTTC
TCCAACCAGGTGGAGGACATTAGTCCTGGGACCTGGGCAAGACTACATGGGTCCACAAAGCCAG
GCACTGCCAACTAGAGTAAGAGAATGATATATACAAATCAAACTTGGAGCCATGGAGAAACTGA
GCTCTACAGAGGCAACAGTGCAGGGTGGAAAATTACCTGGAATTGTCAGTGATTTTTTTTGTTT
GCAGGTGGTGAAATAAAGAATTTGTTTGGTTCCAAA

hide sequence

RefSeq Acc Id:

XM_005661165 ⟹ XP_005661222

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	52,297,668 - 52,313,277 (-)	NCBI

Sequence:

show sequence

CAGAGTATGCGTCCATGTATATAAAGTCAAAACTATAAATTAGCCAATACTATTTATGGTATTG
GGGTTATGGTTACTCTTTGTATAGTAGAGACAAGAAGTGGTCCAAAAGGTTTTCTTGGGTTCTG
GTATATTCCATTTCATAATATGGGAGCTGGTTGCATAGGTTTGTTAGGAAAAGCCGGCAGAAAG
GCTTGCGGGATGGAAGTACAATGATTTAGGGGCAGAGCAGAGGGGCAGAAGCTCTGGATGGGTG
ACAGGATATGTGGTAACAAGTGACTTCAAAAGGAAGCTTAGAACTGGTAAAGAAGGGTCCTGAG
AACCATCATTTGGCAGCCCTGAAGAGGGAATGGTCTCCTTCCCTTGTGTTTCCAGAAAACAACA
CTAATAGCACATCTCAGTGGAACAAAACATTGCAGACAGCTCAGCCAGCAAGCTCTTGGAGCAA
CAGCTGGCCAGGAGTCCCCACAACCCGGGCAGTGAGACCCTGGATGGTCATTAACTTGTGGGTG
CCTCCAGTGGCAAGGCTGTGGCGAGGATTAAGCTAAGTCTGACCTCACCGTAAGAAATCATAAT
TTACTTGCAAGGACTAGTCAAATGGGTGGCCCCGAAAACTACTCCGCTCCGGGGACCACTACCC
CGACTGCAGCACCTGCAGGGACACCCTTTGGTGGCCAGTGGGCTCACGTAAGCCACAAGAACAT
CAAACCAGGGTACTGACTCCTCCACTGGGCACCCAGGCGGTGTGCAAGGTTCAATGCTTTTTCC
TCAGGGCGGGGAGTGGACAAAGGAGGAGGCAGGGATTGGTTAATCCTGAGAAGAAGGCGGGGCC
TTGACAAAGGAGGGAGGCAGGACCAGAGTCTCCCTGAGAGCCCATTAGCTCCGCCCCCTTAGTG
GGATTCCTGCCTGGGCCTGCAACTCTGAACCGTTAGAGGCGTTTTCTTTCGTTTCCTAGTTTTC
CCAGCAACCCGTGACGCAGCCAGCATGAGGCCGACCACTGGCCAACCCGGGAGAACGGGACTAG
AGCGTGACCCCCTATCACGAGACGCCTCGCAGCTCCCCCCAGTTGGCGGCCCAGCGCTCGGTCA
GGTCCTTCCCTTCGTTCCTCGTCCCAGTCCTCCAGTCCGGGAGGCGGGGTTCGGCGAGCCAGCT
GAGTGGGACCCTCGCGGTGTCCGAGGAGCTAGTCGGCGACCGGTGGGCTGGCTCTTTAAGGGCG
AAATTTCGCCCAAGGAGAATCTGACCAGCAACTCCTGAGGAAAACTGAGGCACCTGGGATTGGC
TGCACTTCGAGGGGACCAGGGAAGGCGACCTGCTCAGGGTACAGCACATCCTGCTCCAGAGGCA
TAGGAAGAGAACATTGTACATGTGCAATTCCCACCTAATGTGTCACTCCTGCCAAATGCAGAGG
GTAGCAGAAGCTCCAGAGCCCATACCTGCAGGACTCAGGCAAACCTCTCTGCTGGCCACCTTGA
AAAGGCTGTAGCACCTGCCCCTGAGAGAAGGAACACTGGAATCTACAGACCAGTTTTCCAGGCC
TCCCCGTTTTCCCTTTGTTACCTTTCCAGGCCTTAAGAAAACTGAAAATAACTGTCAGCTTGAG
GACGTGGACCCTGGAGTGTGAGTGCCACACTGCACCCTGAGGGCTACCGGCCCAGCGCTCACCA
TGTTTGCTGCATCAGAGGCAGGAGTGGGCAGGCCTTACACGTGCAGTGAATGTGGCAAGAGCTT
CCGCTACAGTTCAGTGCTGCTACGGCATGAGCGCGCCCATGGCAGTGATAGCCATTTGCGCTGT
CTAGAGTGTGGTGAGCATTGTGCACAGGCTGCAGACCTCCGTTCACACCGACGTGTCCATGCCG
GCCAGACCCTCTATATCTGCAGCGAATGTGGCCAGAGCTTCCGCCACAGCGGCCGCCTTGACCT
GCACCAGAGTGTGCACAGGCGGCGTGGCCGCTCCTGCCGCTGCCGCACTTGTGGCCGTTGCTTC
CCACACCTCCCGGCCCTACTACTGCACAGGCGTCACTGGCACCCTCCCGAGCGGCCCTGCCGCT
GTCCTCTGTGCCCTCGCGCCTTCCGGCAGAGCGCCCTGCGTTTCCACCAAGCACGGGCGCATCC
CTGGGGGATACCAGCTGTGCCCACTGACACGCTCCACCACTGTACACAGTGCTCACGGGTTTTC
TGCAGTGGCGTGGGACTTCGGAGGCATTTGCGTGTCCACGTGGCCAGGAGCCCTGGTGACTCCA
CACTCCAGCAGCCAGCTACTCTGGACGCACACCAGTGTGGTGTGTGTGGCAAGAGCTTTGCCAA
GAGTTCCACGTTAACACGACATCTGCAGGCGCACTCAGGCGAGAAGCCTTTCAAATGCCCTGAG
TGCGGTAAGGGCTTCTTGGAGAGTGCCACGCTGGTGCGCCATCAGCGCACGCACACAGGCGAGA
AGCCCTATGCCTGTGGTGACTGTGGGCGCCGCTTTAGCGAAAGCTCAACACTGCTACGCCATCG
TCGCAGCCACCAGGGAGAGCGACCACATGCATGCGCCACGTGTGGCAAGGGCTTTGGTCAGCGC
TCCGACCTCATAGTGCACCAGCGCATCCATACGGGCGAAAGGCCCTTCCCATGTACTGAGTGTG
GCCGCTGCTTCAGCGACCGTTCAGACCTCACTAAGCACTGGCGCACACACACAGGCGAGAAGCC
TTATCGTTGTGAGCTGTGTGGCAAGCGCTTCACATGCGTGTCCAACCTCAACGTCCACTTGCGC
AATCACGCTGGCCACAAGCCCCACAAGTGCCCTGAATGTGGCAAAGCCTTCAGTGTGAGCTCCA
AGCTGGCCCTACACCGCAAGACACATCTGGGTGAGCGGCCAGCAGAATGTGCAGAGTGTGGCAA
ATGCTTTAGCCACAGCCGCTCGCTGTCGCAGCACCAGCGGGCTCATACCCGTGCTCGTGCAGCA
ACTACTGCTGCCACTGCCACTCAGGACAAGGCAAGCACTGCGCTCATCTTTGCTGAGCAAGCAA
GACAGGAAAAGCTGGGATTTTCTGTGCCTAAGTTTAAAGAGACTTGCTGAGAGATCTCCCTGGA
GTGGGCTGGATAAGCACTTATGTAGTGCCACAGGGCTGGTGGGGGCAACTGGCAGGTGGAGGTC
TGTGGAAAGACAGCATGGCCTGTTACCTTCCTACATCTCTGTTGATAGCCCCTTCACCTGGCCT
CTTGCTGTGCCCCTCATCTACTTGTTAGCTCTTTGCCTGTTCTCAATCCTTCCTTTTCCCTCTC
TGGGGAATAGGTGCAGGGGAAACCTCCCAGACCTCTCAGTGAAAGAATGCCCAAGTATTGGTGT
GTTGCATCCCTGCTGCTGTGCTCATATGTTTCCTGTTTTCCCACCAGTGTTCTGTCTTCTCCCA
TCTCTTTTTTCAGCCTGAGTCTCCTCTACCTCTCCTTTCTGGGTACTTTCGGTATCCTTCCTTT
TCAGGTAATGATCACAGGCTTGGCCAGGGTCAAATTCCTGTGGTCTTCTTATCTCTGTAGTCTT
CTTGCCCTGTGGTCTTCTTGCCTCTTCCTTCTACTTGACTGTTAGTCTCTTTGCAGCTTTCTCC
CGTAGCTTCTGAGAGATGGGAAACTTGCAGAGAGATAGTGAGAGAGCTCACATCACTGAAAGAG
ATCTCCATACCAGAAACAACCAAAGAAGTGTTTCACATCATGTAAAGGTGGGCAGGAGCCCTCA
GCATGGCACCTACCTGTCCTATGGGACAGATCTGCTGGTGTACAGATCAAGGTGCCTCTCAGGA
CAATGTTCTCCAACCAGGTGGAGGACATTAGTCCTGGGACCTGGGCAAGACTACATGGGTCCAC
AAAGCCAGGCACTGCCAACTAGAGTAAGAGAATGATATATACAAATCAAACTTGGAGCCATGGA
GAAACTGAGCTCTACAGAGGCAACAGTGCAGGGTGGAAAATTACCTGGAATTGTCAGTGATTTT
TTTTGTTTGCAGGTGGTGAAATAAAGAATTTGTTTGGTTCCAAA

hide sequence

RefSeq Acc Id:

XM_005661167 ⟹ XP_005661224

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	52,297,668 - 52,313,277 (-)	NCBI

Sequence:

show sequence

CAGAGTATGCGTCCATGTATATAAAGTCAAAACTATAAATTAGCCAATACTATTTATGGTATTG
GGGTTATGGTTACTCTTTGTATAGTAGAGACAAGAAGTGGTCCAAAAGGTTTTCTTGGGTTCTG
GTATATTCCATTTCATAATATGGGAGCTGGTTGCATAGGTTTGTTAGGAAAAGCCGGCAGAAAG
GCTTGCGGGATGGAAGTACAATGATTTAGGGGCAGAGCAGAGGGGCAGAAGCTCTGGATGGGTG
ACAGGATATGTGGTAACAAGTGACTTCAAAAGGAAGCTTAGAACTGGTAAAGAAGGGTCCTGAG
AACCATCATTTGGCAGCCCTGAAGAGGGAATGGTCTCCTTCCCTTGTGTTTCCAGAAAACAACA
CTAATAGCACATCTCAGTGGAACAAAACATTGCAGACAGCTCAGCCAGCAAGCTCTTGGAGCAA
CAGCTGGCCAGGAGTCCCCACAACCCGGGCAGTGAGACCCTGGATGGTCATTAACTTGTGGGTG
CCTCCAGTGGCAAGGCTGTGGCGAGGATTAAGCTAAGTCTGACCTCACCGTAAGAAATCATAAT
TTACTTGCAAGGACTAGTCAAATGGGTGGCCCCGAAAACTACTCCGCTCCGGGGACCACTACCC
CGACTGCAGCACCTGCAGGGACACCCTTTGGTGGCCAGTGGGCTCACGTAAGCCACAAGAACAT
CAAACCAGGGTACTGACTCCTCCACTGGGCACCCAGGCGGTGTGCAAGGTTCAATGCTTTTTCC
TCAGGGCGGGGAGTGGACAAAGGAGGAGGCAGGGATTGGTTAATCCTGAGAAGAAGGCGGGGCC
TTGACAAAGGAGGGAGGCAGGACCAGAGTCTCCCTGAGAGCCCATTAGCTCCGCCCCCTTAGTG
GGATTCCTGCCTGGGCCTGCAACTCTGAACCGTTAGAGGCGTTTTCTTTCGTTTCCTAGTTTTC
CCAGCAACCCGTGACGCAGCCAGCATGAGGCCGACCACTGGCCAACCCGGGAGAACGGGACTAG
AGCGTGACCCCCTATCACGAGACGCCTCGCAGCTCCCCCCAGTTGGCGGCCCAGCGCTCGGTCA
GGTCCTTCCCTTCGTTCCTCGTCCCAGTCCTCCAGTCCGGGAGGCGGGGTTCGGCGAGCCAGCT
GAGTGGGACCCTCGCGGTGTCCGAGGAGCTAGTCGGCGACCGATTTCATCCTAGGCATAGACTC
TTTCCTTTCAGGGCAAGCTCCAACATGAGGCGAGGGTACAGCACATCCTGCTCCAGAGGCATAG
GAAGAGAACATTGTACATGTGCAATTCCCACCTAATGTGTCACTCCTGCCAAATGCAGAGGGTA
GCAGAAGCTCCAGAGCCCATACCTGCAGGACTCAGGCAAACCTCTCTGCTGGCCACCTTGAAAA
GGCTGTAGCACCTGCCCCTGAGAGAAGGAACACTGGAATCTACAGACCAGTTTTCCAGGCCTCC
CCGTTTTCCCTTTGTTACCTTTCCAGGCCTTAAGAAAACTGAAAATAACTGTCAGCTTGAGGAC
GTGGACCCTGGAGTGTGAGTGCCACACTGCACCCTGAGGGCTACCGGCCCAGCGCTCACCATGT
TTGCTGCATCAGAGGCAGGAGTGGGCAGGCCTTACACGTGCAGTGAATGTGGCAAGAGCTTCCG
CTACAGTTCAGTGCTGCTACGGCATGAGCGCGCCCATGGCAGTGATAGCCATTTGCGCTGTCTA
GAGTGTGGTGAGCATTGTGCACAGGCTGCAGACCTCCGTTCACACCGACGTGTCCATGCCGGCC
AGACCCTCTATATCTGCAGCGAATGTGGCCAGAGCTTCCGCCACAGCGGCCGCCTTGACCTGCA
CCAGAGTGTGCACAGGCGGCGTGGCCGCTCCTGCCGCTGCCGCACTTGTGGCCGTTGCTTCCCA
CACCTCCCGGCCCTACTACTGCACAGGCGTCACTGGCACCCTCCCGAGCGGCCCTGCCGCTGTC
CTCTGTGCCCTCGCGCCTTCCGGCAGAGCGCCCTGCGTTTCCACCAAGCACGGGCGCATCCCTG
GGGGATACCAGCTGTGCCCACTGACACGCTCCACCACTGTACACAGTGCTCACGGGTTTTCTGC
AGTGGCGTGGGACTTCGGAGGCATTTGCGTGTCCACGTGGCCAGGAGCCCTGGTGACTCCACAC
TCCAGCAGCCAGCTACTCTGGACGCACACCAGTGTGGTGTGTGTGGCAAGAGCTTTGCCAAGAG
TTCCACGTTAACACGACATCTGCAGGCGCACTCAGGCGAGAAGCCTTTCAAATGCCCTGAGTGC
GGTAAGGGCTTCTTGGAGAGTGCCACGCTGGTGCGCCATCAGCGCACGCACACAGGCGAGAAGC
CCTATGCCTGTGGTGACTGTGGGCGCCGCTTTAGCGAAAGCTCAACACTGCTACGCCATCGTCG
CAGCCACCAGGGAGAGCGACCACATGCATGCGCCACGTGTGGCAAGGGCTTTGGTCAGCGCTCC
GACCTCATAGTGCACCAGCGCATCCATACGGGCGAAAGGCCCTTCCCATGTACTGAGTGTGGCC
GCTGCTTCAGCGACCGTTCAGACCTCACTAAGCACTGGCGCACACACACAGGCGAGAAGCCTTA
TCGTTGTGAGCTGTGTGGCAAGCGCTTCACATGCGTGTCCAACCTCAACGTCCACTTGCGCAAT
CACGCTGGCCACAAGCCCCACAAGTGCCCTGAATGTGGCAAAGCCTTCAGTGTGAGCTCCAAGC
TGGCCCTACACCGCAAGACACATCTGGGTGAGCGGCCAGCAGAATGTGCAGAGTGTGGCAAATG
CTTTAGCCACAGCCGCTCGCTGTCGCAGCACCAGCGGGCTCATACCCGTGCTCGTGCAGCAACT
ACTGCTGCCACTGCCACTCAGGACAAGGCAAGCACTGCGCTCATCTTTGCTGAGCAAGCAAGAC
AGGAAAAGCTGGGATTTTCTGTGCCTAAGTTTAAAGAGACTTGCTGAGAGATCTCCCTGGAGTG
GGCTGGATAAGCACTTATGTAGTGCCACAGGGCTGGTGGGGGCAACTGGCAGGTGGAGGTCTGT
GGAAAGACAGCATGGCCTGTTACCTTCCTACATCTCTGTTGATAGCCCCTTCACCTGGCCTCTT
GCTGTGCCCCTCATCTACTTGTTAGCTCTTTGCCTGTTCTCAATCCTTCCTTTTCCCTCTCTGG
GGAATAGGTGCAGGGGAAACCTCCCAGACCTCTCAGTGAAAGAATGCCCAAGTATTGGTGTGTT
GCATCCCTGCTGCTGTGCTCATATGTTTCCTGTTTTCCCACCAGTGTTCTGTCTTCTCCCATCT
CTTTTTTCAGCCTGAGTCTCCTCTACCTCTCCTTTCTGGGTACTTTCGGTATCCTTCCTTTTCA
GGTAATGATCACAGGCTTGGCCAGGGTCAAATTCCTGTGGTCTTCTTATCTCTGTAGTCTTCTT
GCCCTGTGGTCTTCTTGCCTCTTCCTTCTACTTGACTGTTAGTCTCTTTGCAGCTTTCTCCCGT
AGCTTCTGAGAGATGGGAAACTTGCAGAGAGATAGTGAGAGAGCTCACATCACTGAAAGAGATC
TCCATACCAGAAACAACCAAAGAAGTGTTTCACATCATGTAAAGGTGGGCAGGAGCCCTCAGCA
TGGCACCTACCTGTCCTATGGGACAGATCTGCTGGTGTACAGATCAAGGTGCCTCTCAGGACAA
TGTTCTCCAACCAGGTGGAGGACATTAGTCCTGGGACCTGGGCAAGACTACATGGGTCCACAAA
GCCAGGCACTGCCAACTAGAGTAAGAGAATGATATATACAAATCAAACTTGGAGCCATGGAGAA
ACTGAGCTCTACAGAGGCAACAGTGCAGGGTGGAAAATTACCTGGAATTGTCAGTGATTTTTTT
TGTTTGCAGGTGGTGAAATAAAGAATTTGTTTGGTTCCAAA

hide sequence

RefSeq Acc Id:

XM_005661168 ⟹ XP_005661225

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	52,297,668 - 52,304,639 (-)	NCBI

Sequence:

show sequence

AACCACAGCAATGTGGAATCTGAGCCATGCCAGAGACCTACACCACAGTTCAGGGCAACACCAG
ATCCCTAACCCACTGAGTAAGGTTGGGGATCATACCCACATCCTCATGGATACTAGTCAAGTTT
GGAACCTGCTGAGCCACAATGGGAACTTTGGGTACAGCACATCCTGCTCCAGAGGCATAGGAAG
AGAACATTGTACATGTGCAATTCCCACCTAATGTGTCACTCCTGCCAAATGCAGAGGGTAGCAG
AAGCTCCAGAGCCCATACCTGCAGGACTCAGGCAAACCTCTCTGCTGGCCACCTTGAAAAGGCT
GTAGCACCTGCCCCTGAGAGAAGGAACACTGGAATCTACAGACCAGTTTTCCAGGCCTCCCCGT
TTTCCCTTTGTTACCTTTCCAGGCCTTAAGAAAACTGAAAATAACTGTCAGCTTGAGGACGTGG
ACCCTGGAGTGTGAGTGCCACACTGCACCCTGAGGGCTACCGGCCCAGCGCTCACCATGTTTGC
TGCATCAGAGGCAGGAGTGGGCAGGCCTTACACGTGCAGTGAATGTGGCAAGAGCTTCCGCTAC
AGTTCAGTGCTGCTACGGCATGAGCGCGCCCATGGCAGTGATAGCCATTTGCGCTGTCTAGAGT
GTGGTGAGCATTGTGCACAGGCTGCAGACCTCCGTTCACACCGACGTGTCCATGCCGGCCAGAC
CCTCTATATCTGCAGCGAATGTGGCCAGAGCTTCCGCCACAGCGGCCGCCTTGACCTGCACCAG
AGTGTGCACAGGCGGCGTGGCCGCTCCTGCCGCTGCCGCACTTGTGGCCGTTGCTTCCCACACC
TCCCGGCCCTACTACTGCACAGGCGTCACTGGCACCCTCCCGAGCGGCCCTGCCGCTGTCCTCT
GTGCCCTCGCGCCTTCCGGCAGAGCGCCCTGCGTTTCCACCAAGCACGGGCGCATCCCTGGGGG
ATACCAGCTGTGCCCACTGACACGCTCCACCACTGTACACAGTGCTCACGGGTTTTCTGCAGTG
GCGTGGGACTTCGGAGGCATTTGCGTGTCCACGTGGCCAGGAGCCCTGGTGACTCCACACTCCA
GCAGCCAGCTACTCTGGACGCACACCAGTGTGGTGTGTGTGGCAAGAGCTTTGCCAAGAGTTCC
ACGTTAACACGACATCTGCAGGCGCACTCAGGCGAGAAGCCTTTCAAATGCCCTGAGTGCGGTA
AGGGCTTCTTGGAGAGTGCCACGCTGGTGCGCCATCAGCGCACGCACACAGGCGAGAAGCCCTA
TGCCTGTGGTGACTGTGGGCGCCGCTTTAGCGAAAGCTCAACACTGCTACGCCATCGTCGCAGC
CACCAGGGAGAGCGACCACATGCATGCGCCACGTGTGGCAAGGGCTTTGGTCAGCGCTCCGACC
TCATAGTGCACCAGCGCATCCATACGGGCGAAAGGCCCTTCCCATGTACTGAGTGTGGCCGCTG
CTTCAGCGACCGTTCAGACCTCACTAAGCACTGGCGCACACACACAGGCGAGAAGCCTTATCGT
TGTGAGCTGTGTGGCAAGCGCTTCACATGCGTGTCCAACCTCAACGTCCACTTGCGCAATCACG
CTGGCCACAAGCCCCACAAGTGCCCTGAATGTGGCAAAGCCTTCAGTGTGAGCTCCAAGCTGGC
CCTACACCGCAAGACACATCTGGGTGAGCGGCCAGCAGAATGTGCAGAGTGTGGCAAATGCTTT
AGCCACAGCCGCTCGCTGTCGCAGCACCAGCGGGCTCATACCCGTGCTCGTGCAGCAACTACTG
CTGCCACTGCCACTCAGGACAAGGCAAGCACTGCGCTCATCTTTGCTGAGCAAGCAAGACAGGA
AAAGCTGGGATTTTCTGTGCCTAAGTTTAAAGAGACTTGCTGAGAGATCTCCCTGGAGTGGGCT
GGATAAGCACTTATGTAGTGCCACAGGGCTGGTGGGGGCAACTGGCAGGTGGAGGTCTGTGGAA
AGACAGCATGGCCTGTTACCTTCCTACATCTCTGTTGATAGCCCCTTCACCTGGCCTCTTGCTG
TGCCCCTCATCTACTTGTTAGCTCTTTGCCTGTTCTCAATCCTTCCTTTTCCCTCTCTGGGGAA
TAGGTGCAGGGGAAACCTCCCAGACCTCTCAGTGAAAGAATGCCCAAGTATTGGTGTGTTGCAT
CCCTGCTGCTGTGCTCATATGTTTCCTGTTTTCCCACCAGTGTTCTGTCTTCTCCCATCTCTTT
TTTCAGCCTGAGTCTCCTCTACCTCTCCTTTCTGGGTACTTTCGGTATCCTTCCTTTTCAGGTA
ATGATCACAGGCTTGGCCAGGGTCAAATTCCTGTGGTCTTCTTATCTCTGTAGTCTTCTTGCCC
TGTGGTCTTCTTGCCTCTTCCTTCTACTTGACTGTTAGTCTCTTTGCAGCTTTCTCCCGTAGCT
TCTGAGAGATGGGAAACTTGCAGAGAGATAGTGAGAGAGCTCACATCACTGAAAGAGATCTCCA
TACCAGAAACAACCAAAGAAGTGTTTCACATCATGTAAAGGTGGGCAGGAGCCCTCAGCATGGC
ACCTACCTGTCCTATGGGACAGATCTGCTGGTGTACAGATCAAGGTGCCTCTCAGGACAATGTT
CTCCAACCAGGTGGAGGACATTAGTCCTGGGACCTGGGCAAGACTACATGGGTCCACAAAGCCA
GGCACTGCCAACTAGAGTAAGAGAATGATATATACAAATCAAACTTGGAGCCATGGAGAAACTG
AGCTCTACAGAGGCAACAGTGCAGGGTGGAAAATTACCTGGAATTGTCAGTGATTTTTTTTGTT
TGCAGGTGGTGAAATAAAGAATTTGTTTGGTTCCAAA

hide sequence

RefSeq Acc Id:

XM_021083393 ⟹ XP_020939052

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	52,297,668 - 52,309,309 (-)	NCBI

Sequence:

show sequence

CACAGCTCATGGCAATGGGGATCCTTAATCCACTGAATGAGGCCAGAGAGCAAACCCACATCCT
CATGGACGGTAGGGTTCTGAACCTGCTAAGCCACAACAGGAACTCCTCTCCCTTTGTATATTGC
TGCAAGATTTGGAAAGGCTATTTGGCAAACACTACCCAATAGAAATAAAATGTGAGCCACATTT
GAAATCCTCACTTTTCTTGAAAACTGGTGAAATTTAAAAAATAGATTTCACTTAACTCAATATA
TCCAAAATATTATGTTTAACATAATCAATATTAAACATTATTGATATTTTACATTTTTTTCATA
CTCTTTGAAATTAGCAGTGTATTTTGCCCTTACAGTTGGTCCAATCACATTTTAAGTTTCAGTT
GCCAGATGTGGCTTGTGGCTACTCTAGTGGACAGCACAGCCTGGACAGCCCTCATCCCTGCTTC
TGTAGCCCAAAGCAGTTTTGTCCAACTCTGGCTTCAATATGAAGAAACTGCAAGATGATCCCTT
GCCTCTTCATCATGCACCAGAAATGCTGGCCTGGCAGAAAAGATAACCAGGGAAAAAAGTTTTT
ATACTGACTGAACAATACAACTCAGAAAAAAAGAACTGCACTGCTCTCACAGCAGATTGTTAGT
AAATGTGCTAAATCCTGAATAAGTCCAAAATTCTTGTGAATGGTTAGATATGGCATGAAATGTC
TGCAGTGTCTATTGAATAAAAATAGATGAAGCTCAGAAATTTATCTTTATTGTAAATTTTTGCC
ATTAGCTTATCTTCTTAGTACCTGTTTTTTATTAGTTATATATAGTATTTATAAATGTTCATAT
TAAATACTTGAAAATTATCCAAAAAAAGTATTGAGCATTTAGAACTTTTCACCAGTCACACATA
ATTACCTCCTTCCCTCTATTGAAGCCTACTTTTTTTTTCTCTCCAAAATCAAATCTGATGGTAT
AGCAACTTCAAAACTCAAAATCAGGAAAATGGTGGTTAGGACAGTCTAGAAATAGTTATTTTGG
CACACTAATATTTTATTTTTCTTTCAGATTTCATCCTAGGCATAGACTCTTTCCTTTCAGGGCA
AGCTCCAACATGAGGCGAGGGTACAGCACATCCTGCTCCAGAGGCATAGGAAGAGAACATTGTA
CATGTGCAATTCCCACCTAATGTGTCACTCCTGCCAAATGCAGAGGGTAGCAGAAGCTCCAGAG
CCCATACCTGCAGGACTCAGGCAAACCTCTCTGCTGGCCACCTTGAAAAGGCTGTAGCACCTGC
CCCTGAGAGAAGGAACACTGGAATCTACAGACCAGTTTTCCAGGCCTCCCCGTTTTCCCTTTGT
TACCTTTCCAGGCCTTAAGAAAACTGAAAATAACTGTCAGCTTGAGGACGTGGACCCTGGAGTG
TGAGTGCCACACTGCACCCTGAGGGCTACCGGCCCAGCGCTCACCATGTTTGCTGCATCAGAGG
CAGGAGTGGGCAGGCCTTACACGTGCAGTGAATGTGGCAAGAGCTTCCGCTACAGTTCAGTGCT
GCTACGGCATGAGCGCGCCCATGGCAGTGATAGCCATTTGCGCTGTCTAGAGTGTGGTGAGCAT
TGTGCACAGGCTGCAGACCTCCGTTCACACCGACGTGTCCATGCCGGCCAGACCCTCTATATCT
GCAGCGAATGTGGCCAGAGCTTCCGCCACAGCGGCCGCCTTGACCTGCACCAGAGTGTGCACAG
GCGGCGTGGCCGCTCCTGCCGCTGCCGCACTTGTGGCCGTTGCTTCCCACACCTCCCGGCCCTA
CTACTGCACAGGCGTCACTGGCACCCTCCCGAGCGGCCCTGCCGCTGTCCTCTGTGCCCTCGCG
CCTTCCGGCAGAGCGCCCTGCGTTTCCACCAAGCACGGGCGCATCCCTGGGGGATACCAGCTGT
GCCCACTGACACGCTCCACCACTGTACACAGTGCTCACGGGTTTTCTGCAGTGGCGTGGGACTT
CGGAGGCATTTGCGTGTCCACGTGGCCAGGAGCCCTGGTGACTCCACACTCCAGCAGCCAGCTA
CTCTGGACGCACACCAGTGTGGTGTGTGTGGCAAGAGCTTTGCCAAGAGTTCCACGTTAACACG
ACATCTGCAGGCGCACTCAGGCGAGAAGCCTTTCAAATGCCCTGAGTGCGGTAAGGGCTTCTTG
GAGAGTGCCACGCTGGTGCGCCATCAGCGCACGCACACAGGCGAGAAGCCCTATGCCTGTGGTG
ACTGTGGGCGCCGCTTTAGCGAAAGCTCAACACTGCTACGCCATCGTCGCAGCCACCAGGGAGA
GCGACCACATGCATGCGCCACGTGTGGCAAGGGCTTTGGTCAGCGCTCCGACCTCATAGTGCAC
CAGCGCATCCATACGGGCGAAAGGCCCTTCCCATGTACTGAGTGTGGCCGCTGCTTCAGCGACC
GTTCAGACCTCACTAAGCACTGGCGCACACACACAGGCGAGAAGCCTTATCGTTGTGAGCTGTG
TGGCAAGCGCTTCACATGCGTGTCCAACCTCAACGTCCACTTGCGCAATCACGCTGGCCACAAG
CCCCACAAGTGCCCTGAATGTGGCAAAGCCTTCAGTGTGAGCTCCAAGCTGGCCCTACACCGCA
AGACACATCTGGGTGAGCGGCCAGCAGAATGTGCAGAGTGTGGCAAATGCTTTAGCCACAGCCG
CTCGCTGTCGCAGCACCAGCGGGCTCATACCCGTGCTCGTGCAGCAACTACTGCTGCCACTGCC
ACTCAGGACAAGGCAAGCACTGCGCTCATCTTTGCTGAGCAAGCAAGACAGGAAAAGCTGGGAT
TTTCTGTGCCTAAGTTTAAAGAGACTTGCTGAGAGATCTCCCTGGAGTGGGCTGGATAAGCACT
TATGTAGTGCCACAGGGCTGGTGGGGGCAACTGGCAGGTGGAGGTCTGTGGAAAGACAGCATGG
CCTGTTACCTTCCTACATCTCTGTTGATAGCCCCTTCACCTGGCCTCTTGCTGTGCCCCTCATC
TACTTGTTAGCTCTTTGCCTGTTCTCAATCCTTCCTTTTCCCTCTCTGGGGAATAGGTGCAGGG
GAAACCTCCCAGACCTCTCAGTGAAAGAATGCCCAAGTATTGGTGTGTTGCATCCCTGCTGCTG
TGCTCATATGTTTCCTGTTTTCCCACCAGTGTTCTGTCTTCTCCCATCTCTTTTTTCAGCCTGA
GTCTCCTCTACCTCTCCTTTCTGGGTACTTTCGGTATCCTTCCTTTTCAGGTAATGATCACAGG
CTTGGCCAGGGTCAAATTCCTGTGGTCTTCTTATCTCTGTAGTCTTCTTGCCCTGTGGTCTTCT
TGCCTCTTCCTTCTACTTGACTGTTAGTCTCTTTGCAGCTTTCTCCCGTAGCTTCTGAGAGATG
GGAAACTTGCAGAGAGATAGTGAGAGAGCTCACATCACTGAAAGAGATCTCCATACCAGAAACA
ACCAAAGAAGTGTTTCACATCATGTAAAGGTGGGCAGGAGCCCTCAGCATGGCACCTACCTGTC
CTATGGGACAGATCTGCTGGTGTACAGATCAAGGTGCCTCTCAGGACAATGTTCTCCAACCAGG
TGGAGGACATTAGTCCTGGGACCTGGGCAAGACTACATGGGTCCACAAAGCCAGGCACTGCCAA
CTAGAGTAAGAGAATGATATATACAAATCAAACTTGGAGCCATGGAGAAACTGAGCTCTACAGA
GGCAACAGTGCAGGGTGGAAAATTACCTGGAATTGTCAGTGATTTTTTTTGTTTGCAGGTGGTG
AAATAAAGAATTTGTTTGGTTCCAAA

hide sequence

RefSeq Acc Id:

XM_021083394 ⟹ XP_020939053

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	52,297,668 - 52,312,075 (-)	NCBI

Sequence:

show sequence

ACCGAGGGCCCGGGAAGGAGGGTTGGCACGGGCAGAGGTCCCCAACTGTCGCCCAGCTTCTACC
CTCCGCTCTGGGCGGCTCTCTTCTGCGGAGGTGGAGGACGCCGCTCCCGCAACCAATGACGTCG
GCCTCAGCGCAGCGCGCGATTGGCCGGCGCTCGCACGCTGCTGCTGCGTGGCCTGCTTCTTCCA
GGCCTTGCCCTTTTTCTGTCCTCGCTAGTTCTCCCTCTGGGACCTTCCTGGCTGGCGGCCGACG
ATGCAGACATCACCAAGCTGAGCCGTATTAAAACGGAGCGACTGCCACCAGGATCCGTCGATAC
TCCACTATGTTTTTGGTGCCCTGTCTTGTCTTTCAGGGTACAGCACATCCTGCTCCAGAGGCAT
AGGAAGAGAACATTGTACATGTGCAATTCCCACCTAATGTGTCACTCCTGCCAAATGCAGAGGG
TAGCAGAAGCTCCAGAGCCCATACCTGCAGGACTCAGGCAAACCTCTCTGCTGGCCACCTTGAA
AAGGCTGTAGCACCTGCCCCTGAGAGAAGGAACACTGGAATCTACAGACCAGTTTTCCAGGCCT
CCCCGTTTTCCCTTTGTTACCTTTCCAGGCCTTAAGAAAACTGAAAATAACTGTCAGCTTGAGG
ACGTGGACCCTGGAGTGTGAGTGCCACACTGCACCCTGAGGGCTACCGGCCCAGCGCTCACCAT
GTTTGCTGCATCAGAGGCAGGAGTGGGCAGGCCTTACACGTGCAGTGAATGTGGCAAGAGCTTC
CGCTACAGTTCAGTGCTGCTACGGCATGAGCGCGCCCATGGCAGTGATAGCCATTTGCGCTGTC
TAGAGTGTGGTGAGCATTGTGCACAGGCTGCAGACCTCCGTTCACACCGACGTGTCCATGCCGG
CCAGACCCTCTATATCTGCAGCGAATGTGGCCAGAGCTTCCGCCACAGCGGCCGCCTTGACCTG
CACCAGAGTGTGCACAGGCGGCGTGGCCGCTCCTGCCGCTGCCGCACTTGTGGCCGTTGCTTCC
CACACCTCCCGGCCCTACTACTGCACAGGCGTCACTGGCACCCTCCCGAGCGGCCCTGCCGCTG
TCCTCTGTGCCCTCGCGCCTTCCGGCAGAGCGCCCTGCGTTTCCACCAAGCACGGGCGCATCCC
TGGGGGATACCAGCTGTGCCCACTGACACGCTCCACCACTGTACACAGTGCTCACGGGTTTTCT
GCAGTGGCGTGGGACTTCGGAGGCATTTGCGTGTCCACGTGGCCAGGAGCCCTGGTGACTCCAC
ACTCCAGCAGCCAGCTACTCTGGACGCACACCAGTGTGGTGTGTGTGGCAAGAGCTTTGCCAAG
AGTTCCACGTTAACACGACATCTGCAGGCGCACTCAGGCGAGAAGCCTTTCAAATGCCCTGAGT
GCGGTAAGGGCTTCTTGGAGAGTGCCACGCTGGTGCGCCATCAGCGCACGCACACAGGCGAGAA
GCCCTATGCCTGTGGTGACTGTGGGCGCCGCTTTAGCGAAAGCTCAACACTGCTACGCCATCGT
CGCAGCCACCAGGGAGAGCGACCACATGCATGCGCCACGTGTGGCAAGGGCTTTGGTCAGCGCT
CCGACCTCATAGTGCACCAGCGCATCCATACGGGCGAAAGGCCCTTCCCATGTACTGAGTGTGG
CCGCTGCTTCAGCGACCGTTCAGACCTCACTAAGCACTGGCGCACACACACAGGCGAGAAGCCT
TATCGTTGTGAGCTGTGTGGCAAGCGCTTCACATGCGTGTCCAACCTCAACGTCCACTTGCGCA
ATCACGCTGGCCACAAGCCCCACAAGTGCCCTGAATGTGGCAAAGCCTTCAGTGTGAGCTCCAA
GCTGGCCCTACACCGCAAGACACATCTGGGTGAGCGGCCAGCAGAATGTGCAGAGTGTGGCAAA
TGCTTTAGCCACAGCCGCTCGCTGTCGCAGCACCAGCGGGCTCATACCCGTGCTCGTGCAGCAA
CTACTGCTGCCACTGCCACTCAGGACAAGGCAAGCACTGCGCTCATCTTTGCTGAGCAAGCAAG
ACAGGAAAAGCTGGGATTTTCTGTGCCTAAGTTTAAAGAGACTTGCTGAGAGATCTCCCTGGAG
TGGGCTGGATAAGCACTTATGTAGTGCCACAGGGCTGGTGGGGGCAACTGGCAGGTGGAGGTCT
GTGGAAAGACAGCATGGCCTGTTACCTTCCTACATCTCTGTTGATAGCCCCTTCACCTGGCCTC
TTGCTGTGCCCCTCATCTACTTGTTAGCTCTTTGCCTGTTCTCAATCCTTCCTTTTCCCTCTCT
GGGGAATAGGTGCAGGGGAAACCTCCCAGACCTCTCAGTGAAAGAATGCCCAAGTATTGGTGTG
TTGCATCCCTGCTGCTGTGCTCATATGTTTCCTGTTTTCCCACCAGTGTTCTGTCTTCTCCCAT
CTCTTTTTTCAGCCTGAGTCTCCTCTACCTCTCCTTTCTGGGTACTTTCGGTATCCTTCCTTTT
CAGGTAATGATCACAGGCTTGGCCAGGGTCAAATTCCTGTGGTCTTCTTATCTCTGTAGTCTTC
TTGCCCTGTGGTCTTCTTGCCTCTTCCTTCTACTTGACTGTTAGTCTCTTTGCAGCTTTCTCCC
GTAGCTTCTGAGAGATGGGAAACTTGCAGAGAGATAGTGAGAGAGCTCACATCACTGAAAGAGA
TCTCCATACCAGAAACAACCAAAGAAGTGTTTCACATCATGTAAAGGTGGGCAGGAGCCCTCAG
CATGGCACCTACCTGTCCTATGGGACAGATCTGCTGGTGTACAGATCAAGGTGCCTCTCAGGAC
AATGTTCTCCAACCAGGTGGAGGACATTAGTCCTGGGACCTGGGCAAGACTACATGGGTCCACA
AAGCCAGGCACTGCCAACTAGAGTAAGAGAATGATATATACAAATCAAACTTGGAGCCATGGAG
AAACTGAGCTCTACAGAGGCAACAGTGCAGGGTGGAAAATTACCTGGAATTGTCAGTGATTTTT
TTTGTTTGCAGGTGGTGAAATAAAGAATTTGTTTGGTTCCAAA

hide sequence

RefSeq Acc Id:

XR_001306970

Type:

NON-CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	52,300,954 - 52,313,291 (-)	NCBI

Sequence:

show sequence

GACTCAAAAAATTGCAGAGTATGCGTCCATGTATATAAAGTCAAAACTATAAATTAGCCAATAC
TATTTATGGTATTGGGGTTATGGTTACTCTTTGTATAGTAGAGACAAGAAGTGGTCCAAAAGGT
TTTCTTGGGTTCTGGTATATTCCATTTCATAATATGGGAGCTGGTTGCATAGGTTTGTTAGGAA
AAGCCGGCAGAAAGGCTTGCGGGATGGAAGTACAATGATTTAGGGGCAGAGCAGAGGGGCAGAA
GCTCTGGATGGGTGACAGGATATGTGGTAACAAGTGACTTCAAAAGGAAGCTTAGAACTGGTAA
AGAAGGGTCCTGAGAACCATCATTTGGCAGCCCTGAAGAGGGAATGGTCTCCTTCCCTTGTGTT
TCCAGAAAACAACACTAATAGCACATCTCAGTGGAACAAAACATTGCAGACAGCTCAGCCAGCA
AGCTCTTGGAGCAACAGCTGGCCAGGAGTCCCCACAACCCGGGCAGTGAGACCCTGGATGGTCA
TTAACTTGTGGGTGCCTCCAGTGGCAAGGCTGTGGCGAGGATTAAGCTAAGTCTGACCTCACCG
TAAGAAATCATAATTTACTTGCAAGGACTAGTCAAATGGGTGGCCCCGAAAACTACTCCGCTCC
GGGGACCACTACCCCGACTGCAGCACCTGCAGGGACACCCTTTGGTGGCCAGTGGGCTCACGTA
AGCCACAAGAACATCAAACCAGGGTACTGACTCCTCCACTGGGCACCCAGGCGGTGTGCAAGGT
TCAATGCTTTTTCCTCAGGGCGGGGAGTGGACAAAGGAGGAGGCAGGGATTGGTTAATCCTGAG
AAGAAGGCGGGGCCTTGACAAAGGAGGGAGGCAGGACCAGAGTCTCCCTGAGAGCCCATTAGCT
CCGCCCCCTTAGTGGGATTCCTGCCTGGGCCTGCAACTCTGAACCGTTAGAGGCGTTTTCTTTC
GTTTCCTAGTTTTCCCAGCAACCCGTGACGCAGCCAGCATGAGGCCGACCACTGGCCAACCCGG
GAGAACGGGACTAGAGCGTGACCCCCTATCACGAGACGCCTCGCAGCTCCCCCCAGTTGGCGGC
CCAGCGCTCGGTCAGGTCCTTCCCTTCGTTCCTCGTCCCAGTCCTCCAGTCCGGGAGGCGGGGT
TCGGCGAGCCAGCTGAGTGGGACCCTCGCGGTGTCCGAGGAGCTAGTCGGCGACCGGTGGGCTG
GCTCTTTAAGGGCGAAATTTCGCCCAAGGAGAATCTGACCAGCAACTCCTGAGGAAAACTGAGG
CACCTGGGATTGGCTGCACTTCGAGGGGACCAGGGAAGGCGACCTGCTCAGATTTCATCCTAGG
CATAGACTCTTTCCTTTCAGGGCAAGCTCCAACATGAGGCGAGGGTACAGCACATCCTGCTCCA
GAGGCATAGGAAGAGAACATTGTACATGTGCAATTCCCACCTAATGTGTCACTCCTGCCAAATG
CAGAGGGTAGCAGAAGCTCCAGAGCCCATACCTGCAGTTTTCAGATCCTTGGAGCTGGAGCAAA
GGAGTAAAGTCTACAGAGTGTTTGCAAAGAAGTTGAATGCCCAGAGAATTAGAAACAATGTTCC
TTCCTTTTCCCCAGACTTTCCTAAAAATGGCAAAAGCACTTCTTGAATAATAGTATCAGCTTTT
GATAATA

hide sequence

RefSeq Acc Id:

XR_002341583

Type:

NON-CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	52,308,074 - 52,313,269 (-)	NCBI

Sequence:

show sequence

GCGTCCATGTATATAAAGTCAAAACTATAAATTAGCCAATACTATTTATGGTATTGGGGTTATG
GTTACTCTTTGTATAGTAGAGACAAGAAGTGGTCCAAAAGGTTTTCTTGGGTTCTGGTATATTC
CATTTCATAATATGGGAGCTGGTTGCATAGGTTTGTTAGGAAAAGCCGGCAGAAAGGCTTGCGG
GATGGAAGTACAATGATTTAGGGGCAGAGCAGAGGGGCAGAAGCTCTGGATGGGTGACAGGATA
TGTGGTAACAAGTGACTTCAAAAGGAAGCTTAGAACTGGTAAAGAAGGGTCCTGAGAACCATCA
TTTGGCAGCCCTGAAGAGGGAATGGTCTCCTTCCCTTGTGTTTCCAGAAAACAACACTAATAGC
ACATCTCAGTGGAACAAAACATTGCAGACAGCTCAGCCAGCAAGCTCTTGGAGCAACAGCTGGC
CAGGAGTCCCCACAACCCGGGCAGTGAGACCCTGGATGGTCATTAACTTGTGGGTGCCTCCAGT
GGCAAGGCTGTGGCGAGGATTAAGCTAAGTCTGACCTCACCGTAAGAAATCATAATTTACTTGC
AAGGACTAGTCAAATGGGTGGCCCCGAAAACTACTCCGCTCCGGGGACCACTACCCCGACTGCA
GCACCTGCAGGGACACCCTTTGGTGGCCAGTGGGCTCACGTAAGCCACAAGAACATCAAACCAG
GGTACTGACTCCTCCACTGGGCACCCAGGCGGTGTGCAAGGTTCAATGCTTTTTCCTCAGGGCG
GGGAGTGGACAAAGGAGGAGGCAGGGATTGGTTAATCCTGAGAAGAAGGCGGGGCCTTGACAAA
GGAGGGAGGCAGGACCAGAGTCTCCCTGAGAGCCCATTAGCTCCGCCCCCTTAGTGGGATTCCT
GCCTGGGCCTGCAACTCTGAACCGTTAGAGGCGTTTTCTTTCGTTTCCTAGTTTTCCCAGCAAC
CCGTGACGCAGCCAGCATGAGGCCGACCACTGGCCAACCCGGGAGAACGGGACTAGAGCGTGAC
CCCCTATCACGAGACGCCTCGCAGCTCCCCCCAGTTGGCGGCCCAGCGCTCGGTCAGGTCCTTC
CCTTCGTTCCTCGTCCCAGTCCTCCAGTCCGGGAGGCGGGGTTCGGCGAGCCAGCTGAGTGGGA
CCCTCGCGGTGTCCGAGGAGCTAGTCGGCGACCGGTGGGCTGGCTCTTTAAGGGCGAAATTTCG
CCCAAGGAGAATCTGACCAGCAACTCCTGAGGAAAACTGAGGCACCTGGGATTGGCTGCACTTC
GAGGGGACCAGGGAAGGCGACCTGCTCAGATTTCATCCTAGGCATAGACTCTTTCCTTTCAGGG
CAAGCTCCAACATGAGGCGAGGTACAGAAGAGAGACTTGAATGATACACTCTGGCACTCAAGCA
CCAAACCTGCACCCTAGACCTGGGTCTCTTACTCCACCTCTGTAATGGGGGAAGTGGTATTTTT
TTTATAAATCATTTATATGTGC

hide sequence

Protein Sequences


Protein RefSeqs	XP_003123645	(Get FASTA)	NCBI Sequence Viewer
	XP_005661221	(Get FASTA)	NCBI Sequence Viewer
	XP_005661222	(Get FASTA)	NCBI Sequence Viewer
	XP_005661224	(Get FASTA)	NCBI Sequence Viewer
	XP_005661225	(Get FASTA)	NCBI Sequence Viewer
	XP_020939052	(Get FASTA)	NCBI Sequence Viewer
	XP_020939053	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000014862
	ENSSSCP00000014862.1
	ENSSSCP00000044516.1
	ENSSSCP00000062875
	ENSSSCP00000062875.1
	ENSSSCP00035026477.1
	ENSSSCP00035026482.1
	ENSSSCP00035026483.1
	ENSSSCP00035026485.1
	ENSSSCP00065023932.1
	ENSSSCP00065023934.1
	ENSSSCP00065023935.1
	ENSSSCP00065023936.1
	ENSSSCP00070021153.1
	ENSSSCP00070021159.1

RefSeq Acc Id:

XP_003123645 ⟸ XM_003123597

- UniProtKB:

F1S5U0 (UniProtKB/TrEMBL), A0A4X1TZY6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MFAASEAGVGRPYTCSECGKSFRYSSVLLRHERAHGSDSHLRCLECGEHCAQAADLRSHRRVHA
GQTLYICSECGQSFRHSGRLDLHQSVHRRRGRSCRCRTCGRCFPHLPALLLHRRHWHPPERPCR
CPLCPRAFRQSALRFHQARAHPWGIPAVPTDTLHHCTQCSRVFCSGVGLRRHLRVHVARSPGDS
TLQQPATLDAHQCGVCGKSFAKSSTLTRHLQAHSGEKPFKCPECGKGFLESATLVRHQRTHTGE
KPYACGDCGRRFSESSTLLRHRRSHQGERPHACATCGKGFGQRSDLIVHQRIHTGERPFPCTEC
GRCFSDRSDLTKHWRTHTGEKPYRCELCGKRFTCVSNLNVHLRNHAGHKPHKCPECGKAFSVSS
KLALHRKTHLGERPAECAECGKCFSHSRSLSQHQRAHTRARAATTAATATQDKASTALIFAEQA
RQEKLGFSVPKFKETC

hide sequence

RefSeq Acc Id:

XP_005661224 ⟸ XM_005661167

- UniProtKB:

F1S5U0 (UniProtKB/TrEMBL), A0A4X1TZY6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MFAASEAGVGRPYTCSECGKSFRYSSVLLRHERAHGSDSHLRCLECGEHCAQAADLRSHRRVHA
GQTLYICSECGQSFRHSGRLDLHQSVHRRRGRSCRCRTCGRCFPHLPALLLHRRHWHPPERPCR
CPLCPRAFRQSALRFHQARAHPWGIPAVPTDTLHHCTQCSRVFCSGVGLRRHLRVHVARSPGDS
TLQQPATLDAHQCGVCGKSFAKSSTLTRHLQAHSGEKPFKCPECGKGFLESATLVRHQRTHTGE
KPYACGDCGRRFSESSTLLRHRRSHQGERPHACATCGKGFGQRSDLIVHQRIHTGERPFPCTEC
GRCFSDRSDLTKHWRTHTGEKPYRCELCGKRFTCVSNLNVHLRNHAGHKPHKCPECGKAFSVSS
KLALHRKTHLGERPAECAECGKCFSHSRSLSQHQRAHTRARAATTAATATQDKASTALIFAEQA
RQEKLGFSVPKFKETC

hide sequence

RefSeq Acc Id:

XP_005661222 ⟸ XM_005661165

- UniProtKB:

F1S5U0 (UniProtKB/TrEMBL), A0A4X1TZY6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MFAASEAGVGRPYTCSECGKSFRYSSVLLRHERAHGSDSHLRCLECGEHCAQAADLRSHRRVHA
GQTLYICSECGQSFRHSGRLDLHQSVHRRRGRSCRCRTCGRCFPHLPALLLHRRHWHPPERPCR
CPLCPRAFRQSALRFHQARAHPWGIPAVPTDTLHHCTQCSRVFCSGVGLRRHLRVHVARSPGDS
TLQQPATLDAHQCGVCGKSFAKSSTLTRHLQAHSGEKPFKCPECGKGFLESATLVRHQRTHTGE
KPYACGDCGRRFSESSTLLRHRRSHQGERPHACATCGKGFGQRSDLIVHQRIHTGERPFPCTEC
GRCFSDRSDLTKHWRTHTGEKPYRCELCGKRFTCVSNLNVHLRNHAGHKPHKCPECGKAFSVSS
KLALHRKTHLGERPAECAECGKCFSHSRSLSQHQRAHTRARAATTAATATQDKASTALIFAEQA
RQEKLGFSVPKFKETC

hide sequence

RefSeq Acc Id:

XP_005661221 ⟸ XM_005661164

- UniProtKB:

F1S5U0 (UniProtKB/TrEMBL), A0A4X1TZY6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MFAASEAGVGRPYTCSECGKSFRYSSVLLRHERAHGSDSHLRCLECGEHCAQAADLRSHRRVHA
GQTLYICSECGQSFRHSGRLDLHQSVHRRRGRSCRCRTCGRCFPHLPALLLHRRHWHPPERPCR
CPLCPRAFRQSALRFHQARAHPWGIPAVPTDTLHHCTQCSRVFCSGVGLRRHLRVHVARSPGDS
TLQQPATLDAHQCGVCGKSFAKSSTLTRHLQAHSGEKPFKCPECGKGFLESATLVRHQRTHTGE
KPYACGDCGRRFSESSTLLRHRRSHQGERPHACATCGKGFGQRSDLIVHQRIHTGERPFPCTEC
GRCFSDRSDLTKHWRTHTGEKPYRCELCGKRFTCVSNLNVHLRNHAGHKPHKCPECGKAFSVSS
KLALHRKTHLGERPAECAECGKCFSHSRSLSQHQRAHTRARAATTAATATQDKASTALIFAEQA
RQEKLGFSVPKFKETC

hide sequence

RefSeq Acc Id:

XP_020939053 ⟸ XM_021083394

- UniProtKB:

A0A4X1TZY6 (UniProtKB/TrEMBL), F1S5U0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MFAASEAGVGRPYTCSECGKSFRYSSVLLRHERAHGSDSHLRCLECGEHCAQAADLRSHRRVHA
GQTLYICSECGQSFRHSGRLDLHQSVHRRRGRSCRCRTCGRCFPHLPALLLHRRHWHPPERPCR
CPLCPRAFRQSALRFHQARAHPWGIPAVPTDTLHHCTQCSRVFCSGVGLRRHLRVHVARSPGDS
TLQQPATLDAHQCGVCGKSFAKSSTLTRHLQAHSGEKPFKCPECGKGFLESATLVRHQRTHTGE
KPYACGDCGRRFSESSTLLRHRRSHQGERPHACATCGKGFGQRSDLIVHQRIHTGERPFPCTEC
GRCFSDRSDLTKHWRTHTGEKPYRCELCGKRFTCVSNLNVHLRNHAGHKPHKCPECGKAFSVSS
KLALHRKTHLGERPAECAECGKCFSHSRSLSQHQRAHTRARAATTAATATQDKASTALIFAEQA
RQEKLGFSVPKFKETC

hide sequence

RefSeq Acc Id:

XP_020939052 ⟸ XM_021083393

- UniProtKB:

A0A4X1TZY6 (UniProtKB/TrEMBL), F1S5U0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MFAASEAGVGRPYTCSECGKSFRYSSVLLRHERAHGSDSHLRCLECGEHCAQAADLRSHRRVHA
GQTLYICSECGQSFRHSGRLDLHQSVHRRRGRSCRCRTCGRCFPHLPALLLHRRHWHPPERPCR
CPLCPRAFRQSALRFHQARAHPWGIPAVPTDTLHHCTQCSRVFCSGVGLRRHLRVHVARSPGDS
TLQQPATLDAHQCGVCGKSFAKSSTLTRHLQAHSGEKPFKCPECGKGFLESATLVRHQRTHTGE
KPYACGDCGRRFSESSTLLRHRRSHQGERPHACATCGKGFGQRSDLIVHQRIHTGERPFPCTEC
GRCFSDRSDLTKHWRTHTGEKPYRCELCGKRFTCVSNLNVHLRNHAGHKPHKCPECGKAFSVSS
KLALHRKTHLGERPAECAECGKCFSHSRSLSQHQRAHTRARAATTAATATQDKASTALIFAEQA
RQEKLGFSVPKFKETC

hide sequence

RefSeq Acc Id:

XP_005661225 ⟸ XM_005661168

- UniProtKB:

F1S5U0 (UniProtKB/TrEMBL), A0A4X1TZY6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MFAASEAGVGRPYTCSECGKSFRYSSVLLRHERAHGSDSHLRCLECGEHCAQAADLRSHRRVHA
GQTLYICSECGQSFRHSGRLDLHQSVHRRRGRSCRCRTCGRCFPHLPALLLHRRHWHPPERPCR
CPLCPRAFRQSALRFHQARAHPWGIPAVPTDTLHHCTQCSRVFCSGVGLRRHLRVHVARSPGDS
TLQQPATLDAHQCGVCGKSFAKSSTLTRHLQAHSGEKPFKCPECGKGFLESATLVRHQRTHTGE
KPYACGDCGRRFSESSTLLRHRRSHQGERPHACATCGKGFGQRSDLIVHQRIHTGERPFPCTEC
GRCFSDRSDLTKHWRTHTGEKPYRCELCGKRFTCVSNLNVHLRNHAGHKPHKCPECGKAFSVSS
KLALHRKTHLGERPAECAECGKCFSHSRSLSQHQRAHTRARAATTAATATQDKASTALIFAEQA
RQEKLGFSVPKFKETC

hide sequence

RefSeq Acc Id:

ENSSSCP00000044516 ⟸ ENSSSCT00000064129

RefSeq Acc Id:

ENSSSCP00000014862 ⟸ ENSSSCT00000015268

RefSeq Acc Id:

ENSSSCP00000062875 ⟸ ENSSSCT00000068694

RefSeq Acc Id:

ENSSSCP00000070961 ⟸ ENSSSCT00000077445

Protein Domains

C2H2-type

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000013978	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00035049053	UniProtKB/TrEMBL
	ENSSSCG00065040273	UniProtKB/TrEMBL
	ENSSSCG00070013086	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000015268	ENTREZGENE
	ENSSSCT00000015268.2	UniProtKB/TrEMBL
	ENSSSCT00000064129.3	UniProtKB/TrEMBL
	ENSSSCT00000068694	ENTREZGENE
	ENSSSCT00000068694.2	UniProtKB/TrEMBL
	ENSSSCT00035065343.1	UniProtKB/TrEMBL
	ENSSSCT00035065349.1	UniProtKB/TrEMBL
	ENSSSCT00035065350.1	UniProtKB/TrEMBL
	ENSSSCT00035065353.1	UniProtKB/TrEMBL
	ENSSSCT00065055068.1	UniProtKB/TrEMBL
	ENSSSCT00065055073.1	UniProtKB/TrEMBL
	ENSSSCT00065055075.1	UniProtKB/TrEMBL
	ENSSSCT00065055078.1	UniProtKB/TrEMBL
	ENSSSCT00070025517.1	UniProtKB/TrEMBL
	ENSSSCT00070025524.1	UniProtKB/TrEMBL
Gene3D-CATH	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	Znf_C2H2_sf	UniProtKB/TrEMBL
	Znf_C2H2_type	UniProtKB/TrEMBL
KEGG Report	ssc:100524362	UniProtKB/TrEMBL
NCBI Gene	ZNF672	ENTREZGENE
PANTHER	CHROMATIN-LINKED ADAPTOR FOR MSL PROTEINS, ISOFORM B-RELATED	UniProtKB/TrEMBL
	ZINC FINGER PROTEIN	UniProtKB/TrEMBL
Pfam	zf-C2H2	UniProtKB/TrEMBL
	zf-C2H2_4	UniProtKB/TrEMBL
	zf-C2H2_6	UniProtKB/TrEMBL
PROSITE	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
SMART	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57667	UniProtKB/TrEMBL
UniProt	A0A4X1TZY6	ENTREZGENE, UniProtKB/TrEMBL
	F1S5U0	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:100890	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar