LOC100623024 (olfactory receptor 2T8-like) - Rat Genome Database

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Gene: LOC100623024 (olfactory receptor 2T8-like) Sus scrofa
Analyze
Symbol: LOC100623024
Name: olfactory receptor 2T8-like
RGD ID: 14058081
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of smell (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1253,581,083 - 53,582,055 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22161,099,733 - 161,100,707 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Variants

.
Variants in LOC100623024
161 total Variants

Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003354399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_003354399   ⟹   XP_003354447
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1253,581,083 - 53,582,055 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003354447 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00030032808.1
  ENSSSCP00035015387.1
  ENSSSCP00040007247.1
  ENSSSCP00065017325.1
  ENSSSCP00070021140.1
RefSeq Acc Id: XP_003354447   ⟸   XM_003354399
- UniProtKB: A0A4X1TXD0 (UniProtKB/TrEMBL),   A0A8D1Y7H5 (UniProtKB/TrEMBL)
- Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00030051650 UniProtKB/TrEMBL
  ENSSSCG00035029125 UniProtKB/TrEMBL
  ENSSSCG00040013318 UniProtKB/TrEMBL
  ENSSSCG00065030292 UniProtKB/TrEMBL
  ENSSSCG00070013081 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00030071955.1 UniProtKB/TrEMBL
  ENSSSCT00035038540.1 UniProtKB/TrEMBL
  ENSSSCT00040017697.1 UniProtKB/TrEMBL
  ENSSSCT00065040901.1 UniProtKB/TrEMBL
  ENSSSCT00070025503.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
KEGG Report ssc:100623024 UniProtKB/TrEMBL
NCBI Gene LOC100623024 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 2T33-RELATED UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
SMART 7TM_GPCR_Srsx UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A4X1TXD0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0X8Z1_PIG UniProtKB/TrEMBL
  A0A8D1K2V3_PIG UniProtKB/TrEMBL
  A0A8D1Y7H5 ENTREZGENE, UniProtKB/TrEMBL