ACP7 (acid phosphatase 7, tartrate resistant (putative)) - Rat Genome Database

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Gene: ACP7 (acid phosphatase 7, tartrate resistant (putative)) Sus scrofa
Analyze
Symbol: ACP7
Name: acid phosphatase 7, tartrate resistant (putative)
RGD ID: 14057313
Description: ENCODES a protein that exhibits acid phosphatase activity (inferred); hydrolase activity (inferred); metal ion binding (inferred); ASSOCIATED WITH genetic disease (ortholog); maturity-onset diabetes of the young type 1 (ortholog); type 2 diabetes mellitus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: acid phosphatase type 7
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl647,840,213 - 47,859,834 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1647,839,504 - 47,860,629 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2643,413,251 - 43,432,327 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
ACP7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl647,840,213 - 47,859,834 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1647,839,504 - 47,860,629 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2643,413,251 - 43,432,327 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ACP7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381939,083,788 - 39,111,493 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1939,083,913 - 39,111,493 (+)EnsemblGRCh38hg38GRCh38
GRCh371939,575,008 - 39,602,133 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361944,266,785 - 44,293,318 (+)NCBINCBI36Build 36hg18NCBI36
Celera1936,377,378 - 36,404,537 (+)NCBICelera
Cytogenetic Map19q13.2NCBI
HuRef1936,021,747 - 36,049,070 (+)NCBIHuRef
CHM1_11939,575,308 - 39,602,545 (+)NCBICHM1_1
T2T-CHM13v2.01941,887,741 - 41,915,473 (+)NCBIT2T-CHM13v2.0
Acp7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39728,304,055 - 28,330,755 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl728,306,701 - 28,330,757 (-)EnsemblGRCm39 Ensembl
GRCm38728,607,322 - 28,631,332 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl728,607,276 - 28,631,332 (-)EnsemblGRCm38mm10GRCm38
MGSCv37729,392,656 - 29,416,034 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36728,316,397 - 28,339,775 (-)NCBIMGSCv36mm8
Celera723,172,719 - 23,196,100 (-)NCBICelera
Cytogenetic Map7B1NCBI
cM Map716.86NCBI
Acp7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8193,022,801 - 93,048,484 (-)NCBIGRCr8
mRatBN7.2183,896,485 - 83,923,436 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl183,898,153 - 83,920,634 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0185,141,383 - 85,162,449 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl185,143,789 - 85,153,210 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0186,357,115 - 86,406,398 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera178,283,514 - 78,314,164 (-)NCBICelera
Cytogenetic Map1q21NCBI
Acp7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955468434,769 - 446,477 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955468432,907 - 452,848 (-)NCBIChiLan1.0ChiLan1.0
ACP7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22045,374,843 - 45,406,669 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11947,237,020 - 47,282,622 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01936,182,793 - 36,211,695 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11944,731,722 - 44,758,298 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1944,733,177 - 44,757,204 (+)Ensemblpanpan1.1panPan2
ACP7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11114,059,670 - 114,077,208 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1114,062,005 - 114,076,079 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1113,462,897 - 113,478,352 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01114,660,903 - 114,676,388 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1114,660,889 - 114,675,505 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11114,218,966 - 114,234,219 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01113,852,118 - 113,867,525 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01114,847,529 - 114,862,976 (-)NCBIUU_Cfam_GSD_1.0
Acp7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934913,562,753 - 13,577,076 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366611,990,638 - 2,004,359 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366611,991,033 - 2,004,359 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ACP7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1633,677,191 - 33,703,272 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl633,678,672 - 33,701,889 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607311,704,010 - 11,730,294 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Acp7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462479412,421,101 - 12,437,696 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462479412,420,419 - 12,440,210 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ACP7
646 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

nervous system
High
Medium 1
Low 9
Below cutoff

Sequence


RefSeq Acc Id: ENSSSCT00000003296   ⟹   ENSSSCP00000003214
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl647,840,213 - 47,858,783 (+)Ensembl
RefSeq Acc Id: ENSSSCT00000077807   ⟹   ENSSSCP00000069970
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl647,840,213 - 47,859,834 (+)Ensembl
RefSeq Acc Id: XM_003355900   ⟹   XP_003355948
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1647,839,706 - 47,860,629 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021094359   ⟹   XP_020950018
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1647,839,703 - 47,852,014 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021094360   ⟹   XP_020950019
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1647,839,504 - 47,852,014 (+)NCBI
Sequence:
RefSeq Acc Id: XP_020950019   ⟸   XM_021094360
- Peptide Label: isoform X1
- UniProtKB: A0A8D1URK5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_020950018   ⟸   XM_021094359
- Peptide Label: isoform X1
- UniProtKB: A0A8D1URK5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003355948   ⟸   XM_003355900
- Peptide Label: isoform X2
- UniProtKB: A0A4X1SXF6 (UniProtKB/TrEMBL),   A0A5G2R0R5 (UniProtKB/TrEMBL),   A0A8D0SB77 (UniProtKB/TrEMBL),   A0A8D0LVW1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000003214   ⟸   ENSSSCT00000003296
RefSeq Acc Id: ENSSSCP00000069970   ⟸   ENSSSCT00000077807

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000002971 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005039580 UniProtKB/TrEMBL
  ENSSSCG00015076944 UniProtKB/TrEMBL
  ENSSSCG00025049808 UniProtKB/TrEMBL
  ENSSSCG00030062404 UniProtKB/TrEMBL
  ENSSSCG00035018015 UniProtKB/TrEMBL
  ENSSSCG00040041688 UniProtKB/TrEMBL
  ENSSSCG00045033633 UniProtKB/TrEMBL
  ENSSSCG00050012744 UniProtKB/TrEMBL
  ENSSSCG00055024943 UniProtKB/TrEMBL
  ENSSSCG00060022520 UniProtKB/TrEMBL
  ENSSSCG00065036909 UniProtKB/TrEMBL
  ENSSSCG00070005068 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000003296.5 UniProtKB/TrEMBL
  ENSSSCT00000077807 ENTREZGENE
  ENSSSCT00000077807.2 UniProtKB/TrEMBL
  ENSSSCT00005063667.1 UniProtKB/TrEMBL
  ENSSSCT00015104110.1 UniProtKB/TrEMBL
  ENSSSCT00025067882.1 UniProtKB/TrEMBL
  ENSSSCT00030087317.1 UniProtKB/TrEMBL
  ENSSSCT00030087339.1 UniProtKB/TrEMBL
  ENSSSCT00035023215.1 UniProtKB/TrEMBL
  ENSSSCT00040055720.1 UniProtKB/TrEMBL
  ENSSSCT00045057532.1 UniProtKB/TrEMBL
  ENSSSCT00050017211.1 UniProtKB/TrEMBL
  ENSSSCT00055049263.1 UniProtKB/TrEMBL
  ENSSSCT00055049358.1 UniProtKB/TrEMBL
  ENSSSCT00060030570.1 UniProtKB/TrEMBL
  ENSSSCT00065050350.1 UniProtKB/TrEMBL
  ENSSSCT00070009608.1 UniProtKB/TrEMBL
  ENSSSCT00070009617.1 UniProtKB/TrEMBL
Gene3D-CATH 3.60.21.10 UniProtKB/TrEMBL
  Purple acid phosphatase-like, N-terminal UniProtKB/TrEMBL
InterPro Calcineurin-like_PHP_ApaH UniProtKB/TrEMBL
  Metallo-depent_PP-like UniProtKB/TrEMBL
  MPP_PAP UniProtKB/TrEMBL
  Purple_acid_Pase-like_N UniProtKB/TrEMBL
  Purple_acid_Pase_N UniProtKB/TrEMBL
  Purple_acid_PPase_C_dom UniProtKB/TrEMBL
KEGG Report ssc:100621910 UniProtKB/TrEMBL
NCBI Gene ACP7 ENTREZGENE
PANTHER ACID PHOSPHATASE TYPE 7 UniProtKB/TrEMBL
  PURPLE ACID PHOSPHATASE UniProtKB/TrEMBL
Pfam Metallophos UniProtKB/TrEMBL
  Metallophos_C UniProtKB/TrEMBL
  Pur_ac_phosph_N UniProtKB/TrEMBL
Superfamily-SCOP SSF49363 UniProtKB/TrEMBL
  SSF56300 UniProtKB/TrEMBL
UniProt A0A4X1SXF6 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1SZS7_PIG UniProtKB/TrEMBL
  A0A5G2R0R5 ENTREZGENE
  A0A8D0LVW1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0SB77 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1URK5 ENTREZGENE, UniProtKB/TrEMBL
  F1RI33_PIG UniProtKB/TrEMBL
UniProt Secondary A0A5G2R0R5 UniProtKB/TrEMBL
VGNC ID VGNC:96901 ENTREZGENE