SINHCAF (Sus scrofa - pig) |
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SINHCAF (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 12 | 31,280,584 - 31,326,150 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 12 | 31,280,584 - 31,327,058 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 12 | 31,433,518 - 31,479,084 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 12 | 31,324,785 - 31,370,340 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 12 | 31,324,784 - 31,370,340 | NCBI | | | | | Celera | 12 | 11,254,383 - 11,300,023 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | p11.21 | NCBI | | | | | HuRef | 12 | 31,186,852 - 31,232,433 (-) | NCBI | | HuRef | | | CHM1_1 | 12 | 31,398,520 - 31,444,157 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 12 | 31,157,116 - 31,202,680 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Sinhcaf (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 6 | 148,822,538 - 148,847,968 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 6 | 148,822,533 - 148,847,965 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 6 | 148,921,057 - 148,946,470 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 6 | 148,921,035 - 148,946,467 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 6 | 148,869,579 - 148,894,954 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 6 | 148,878,227 - 148,903,602 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 6 | 151,959,092 - 151,984,485 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | G3 | NCBI | | | | | cM Map | 6 | 78.67 | NCBI | | | | |
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Sinhcaf (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 4 | 183,619,647 - 183,644,628 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 4 | 181,888,301 - 181,913,294 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 4 | 181,888,312 - 181,910,276 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 4 | 188,163,184 - 188,188,284 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 4 | 183,947,713 - 183,972,815 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 4 | 182,568,207 - 182,593,309 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 4 | 183,401,314 - 183,426,439 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 4 | 183,401,318 - 183,426,439 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 4 | 247,532,024 - 247,556,126 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | Celera | 4 | 170,356,442 - 170,381,382 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | q44 | NCBI | | | | |
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Sinhcaf (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955505 | 4,365,386 - 4,379,232 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955505 | 4,344,465 - 4,377,463 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SINHCAF (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 10 | 65,447,437 - 65,492,192 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 12 | 65,442,956 - 65,487,773 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 12 | 54,914,625 - 54,960,258 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 12 | 57,498,428 - 57,544,498 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 12 | 57,498,428 - 57,544,489 (+) | Ensembl | panpan1.1 | | panPan2 | |
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SINHCAF (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 27 | 17,421,065 - 17,456,628 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 27 | 17,429,052 - 17,455,144 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 27 | 28,961,376 - 28,996,459 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 27 | 17,604,428 - 17,639,788 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 27 | 17,604,757 - 17,639,726 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 27 | 17,413,787 - 17,449,047 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 27 | 17,444,696 - 17,480,029 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 27 | 29,114,405 - 29,149,788 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Sinhcaf (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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SINHCAF (Chlorocebus sabaeus - green monkey) |
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Sinhcaf (Heterocephalus glaber - naked mole-rat) |
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