GSS (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 17 | 38,312,720 - 38,342,298 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 17 | 38,316,199 - 38,342,253 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 17 | 43,511,098 - 43,539,281 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
GSS (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 20 | 34,928,432 - 34,956,027 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 20 | 34,928,432 - 34,956,027 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 20 | 33,516,235 - 33,543,830 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 20 | 32,979,897 - 33,007,262 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 20 | 32,979,897 - 33,007,262 | NCBI | | | | | Celera | 20 | 30,265,329 - 30,292,695 (-) | NCBI | | Celera | | | Cytogenetic Map | 20 | q11.22 | NCBI | | | | | HuRef | 20 | 30,294,556 - 30,321,979 (-) | NCBI | | HuRef | | | CHM1_1 | 20 | 33,417,456 - 33,444,826 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 20 | 36,649,086 - 36,676,682 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Gss (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 2 | 155,405,101 - 155,434,730 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 155,405,101 - 155,434,730 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 155,563,181 - 155,592,810 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 155,563,181 - 155,592,810 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 155,388,919 - 155,418,442 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 155,254,624 - 155,284,147 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 161,495,432 - 161,524,969 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | H1 | NCBI | | | | | cM Map | 2 | 77.26 | NCBI | | | | |
|
Gss (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 3 | 164,508,005 - 164,538,343 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 144,047,849 - 144,078,197 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 144,047,850 - 144,078,198 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 147,914,375 - 147,944,469 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 156,531,652 - 156,561,750 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 154,271,186 - 154,301,288 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 151,076,254 - 151,106,557 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 151,076,254 - 151,106,557 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 157,443,738 - 157,474,042 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 146,057,517 - 146,087,820 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 145,963,138 - 145,993,442 (-) | NCBI | | | | | Celera | 3 | 142,772,407 - 142,802,700 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q42 | NCBI | | | | |
|
Gss (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955422 | 26,427,581 - 26,463,781 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955422 | 26,427,581 - 26,483,380 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
GSS (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 21 | 40,661,205 - 40,688,813 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 20 | 40,654,308 - 40,682,219 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 20 | 31,256,734 - 31,284,356 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 20 | 32,381,745 - 32,409,327 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 20 | 32,381,745 - 32,409,297 (-) | Ensembl | panpan1.1 | | panPan2 | |
|
GSS (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 24 | 23,973,807 - 24,000,281 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 24 | 23,901,045 - 23,997,286 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 24 | 23,619,971 - 23,646,466 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 24 | 24,665,657 - 24,692,375 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 24 | 24,665,043 - 24,692,288 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 24 | 23,952,937 - 23,979,420 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 24 | 24,048,251 - 24,074,736 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 24 | 24,487,171 - 24,513,688 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Gss (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024408640 | 172,955,595 - 172,983,992 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936561 | 5,765,610 - 5,793,567 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936561 | 5,765,637 - 5,793,951 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
GSS (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 2 | 39,230,629 - 39,258,511 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 2 | 39,230,487 - 39,254,648 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666050 | 87,554,278 - 87,582,240 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Gss (Heterocephalus glaber - naked mole-rat) |
|