MYPOP (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 6 | 52,203,703 - 52,212,163 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 6 | 52,203,090 - 52,212,202 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 6 | 47,465,792 - 47,474,019 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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MYPOP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 19 | 45,890,023 - 45,902,613 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 19 | 45,890,023 - 45,902,613 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 19 | 46,393,281 - 46,405,871 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 19 | 51,085,121 - 51,097,702 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 19 | 43,198,306 - 43,210,886 (-) | NCBI | | Celera | | | Cytogenetic Map | 19 | q13.32 | NCBI | | | | | HuRef | 19 | 42,822,075 - 42,834,207 (-) | NCBI | | HuRef | | | CHM1_1 | 19 | 46,395,776 - 46,408,357 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 19 | 48,717,466 - 48,730,055 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Mypop (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 7 | 18,725,230 - 18,735,691 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 7 | 18,725,170 - 18,735,691 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 7 | 18,991,240 - 19,001,766 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 7 | 18,991,245 - 19,001,766 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 7 | 19,576,594 - 19,587,115 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 7 | 18,149,839 - 18,160,285 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 7 | 16,403,131 - 16,413,671 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | A3 | NCBI | | | | | cM Map | 7 | 9.45 | NCBI | | | | |
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Mypop (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 1 | 87,767,747 - 87,778,602 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 78,639,699 - 78,650,555 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 78,639,769 - 78,650,552 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 84,028,700 - 84,039,592 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 92,586,291 - 92,597,187 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 85,783,800 - 85,794,692 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 79,898,492 - 79,909,336 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 79,898,551 - 79,911,513 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 81,159,039 - 81,169,786 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 78,345,206 - 78,355,988 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 1 | 73,105,856 - 73,116,631 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | q21 | NCBI | | | | |
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Mypop (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955574 | 312,744 - 325,288 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955574 | 316,188 - 325,288 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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MYPOP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 20 | 52,056,027 - 52,069,747 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 19 | 53,927,411 - 53,940,196 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 19 | 42,899,792 - 42,912,256 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 19 | 51,436,544 - 51,447,385 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 19 | 51,437,143 - 51,447,333 (-) | Ensembl | panpan1.1 | | panPan2 | |
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MYPOP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 1 | 109,727,852 - 109,736,825 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 1 | 109,728,192 - 109,735,402 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 1 | 109,214,046 - 109,222,187 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 1 | 110,264,878 - 110,269,607 (+) | NCBI | | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | 1 | 109,937,476 - 109,945,612 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 1 | 109,572,184 - 109,580,328 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 1 | 110,440,947 - 110,449,088 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Mypop (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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MYPOP (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 6 | 39,335,878 - 39,348,846 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 6 | 39,336,480 - 39,347,355 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666073 | 18,978,069 - 18,990,868 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Mypop (Heterocephalus glaber - naked mole-rat) |
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