ERAP2 (endoplasmic reticulum aminopeptidase 2) - Rat Genome Database

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Gene: ERAP2 (endoplasmic reticulum aminopeptidase 2) Sus scrofa
Analyze
Symbol: ERAP2
Name: endoplasmic reticulum aminopeptidase 2
RGD ID: 14046594
Description: ENCODES a protein that exhibits endopeptidase activity (ortholog); INVOLVED IN proteolysis (inferred); ASSOCIATED WITH ankylosing spondylitis (ortholog); birdshot chorioretinopathy (ortholog); Crohn's disease (ortholog); FOUND IN endoplasmic reticulum lumen (inferred); membrane (inferred); INTERACTS WITH deoxynivalenol
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Bonobo
Dog
Squirrel
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2103,510,441 - 103,564,437 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12103,510,425 - 103,563,482 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22107,271,180 - 107,294,987 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:14681463   PMID:17145712   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ERAP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2103,510,441 - 103,564,437 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12103,510,425 - 103,563,482 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22107,271,180 - 107,294,987 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ERAP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38596,875,939 - 96,919,716 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl596,875,986 - 96,919,703 (+)EnsemblGRCh38hg38GRCh38
GRCh37596,211,643 - 96,255,420 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36596,241,024 - 96,279,397 (+)NCBINCBI36Build 36hg18NCBI36
Celera592,096,045 - 92,139,932 (+)NCBICelera
Cytogenetic Map5q15NCBI
HuRef591,401,917 - 91,445,503 (+)NCBIHuRef
CHM1_1595,644,340 - 95,688,104 (+)NCBICHM1_1
T2T-CHM13v2.0597,376,720 - 97,420,596 (+)NCBIT2T-CHM13v2.0
ERAP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2492,124,830 - 92,183,295 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1590,276,919 - 90,323,134 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0592,186,786 - 92,231,020 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1597,741,678 - 97,785,071 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl597,741,678 - 97,785,071 (+)Ensemblpanpan1.1panPan2
ERAP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1312,780,084 - 12,819,795 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl312,781,849 - 12,817,025 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha314,120,397 - 14,160,024 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0312,663,616 - 12,703,551 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1312,624,614 - 12,664,222 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0312,619,730 - 12,659,351 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0312,819,388 - 12,859,050 (-)NCBIUU_Cfam_GSD_1.0
Erap2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213168,359,873 - 168,399,137 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365236,544,207 - 6,584,452 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365236,545,281 - 6,584,403 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ERAP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1490,707,064 - 90,754,413 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl490,707,181 - 90,752,325 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604939,346,443 - 39,394,781 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in ERAP2
1418 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence


Ensembl Acc Id: ENSSSCT00000015484   ⟹   ENSSSCP00000015074
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2103,511,453 - 103,561,715 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000022458   ⟹   ENSSSCP00000020372
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2103,510,441 - 103,564,437 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000082224   ⟹   ENSSSCP00000072378
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2103,510,441 - 103,564,437 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000084013   ⟹   ENSSSCP00000065659
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2103,510,459 - 103,523,948 (+)Ensembl
Ensembl Acc Id: ENSSSCT00000097550   ⟹   ENSSSCP00000079510
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl2103,511,433 - 103,561,708 (+)Ensembl
RefSeq Acc Id: XM_003123801   ⟹   XP_003123849
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.12103,510,444 - 103,562,187 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013994998   ⟹   XP_013850452
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.12103,510,446 - 103,562,187 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021085395   ⟹   XP_020941054
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.12103,510,425 - 103,563,482 (+)NCBI
Sequence:
RefSeq Acc Id: XP_020941054   ⟸   XM_021085395
- Peptide Label: isoform X3
- UniProtKB: F1RNU0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003123849   ⟸   XM_003123801
- Peptide Label: isoform X2
- UniProtKB: I3L8L2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013850452   ⟸   XM_013994998
- Peptide Label: isoform X1
- UniProtKB: I3L8L2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000015074   ⟸   ENSSSCT00000015484
Ensembl Acc Id: ENSSSCP00000065659   ⟸   ENSSSCT00000084013
Ensembl Acc Id: ENSSSCP00000020372   ⟸   ENSSSCT00000022458
Ensembl Acc Id: ENSSSCP00000072378   ⟸   ENSSSCT00000082224
Ensembl Acc Id: ENSSSCP00000079510   ⟸   ENSSSCT00000097550

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000027860 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000015484 ENTREZGENE
  ENSSSCT00000015484.5 UniProtKB/TrEMBL
  ENSSSCT00000022458.4 UniProtKB/TrEMBL
  ENSSSCT00000082224.2 UniProtKB/TrEMBL
  ENSSSCT00000084013.2 UniProtKB/TrEMBL
  ENSSSCT00000097550 ENTREZGENE
  ENSSSCT00000097550.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.390.10 UniProtKB/TrEMBL
  1.25.50.20 UniProtKB/TrEMBL
  2.60.40.1730 UniProtKB/TrEMBL
  2.60.40.1910 UniProtKB/TrEMBL
  3.30.2010.30 UniProtKB/TrEMBL
InterPro Aminopeptidase_N-like_N UniProtKB/TrEMBL
  Aminopeptidase_N-like_N UniProtKB/TrEMBL
  ERAP1-like_C_dom UniProtKB/TrEMBL
  M1_APN-typ UniProtKB/TrEMBL
  Peptidase_M1 UniProtKB/TrEMBL
  Peptidase_M1_aminopeptidases UniProtKB/TrEMBL
  Peptidase_M1_dom UniProtKB/TrEMBL
  Peptidase_M4/M1_CTD_sf UniProtKB/TrEMBL
NCBI Gene ERAP2 ENTREZGENE
PANTHER PROTEASE M1 ZINC METALLOPROTEASE UniProtKB/TrEMBL
  PTHR11533:SF239 UniProtKB/TrEMBL
Pfam ERAP1_C UniProtKB/TrEMBL
  Peptidase_M1 UniProtKB/TrEMBL
  Peptidase_M1_N UniProtKB/TrEMBL
PRINTS ALADIPTASE UniProtKB/TrEMBL
Superfamily-SCOP Metalloproteases ('zincins'), catalytic domain UniProtKB/TrEMBL
  SSF63737 UniProtKB/TrEMBL
UniProt A0A5G2R513_PIG UniProtKB/TrEMBL
  A0A5G2RDD5_PIG UniProtKB/TrEMBL
  A0A8W4FJ71_PIG UniProtKB/TrEMBL
  F1RNU0 ENTREZGENE, UniProtKB/TrEMBL
  I3L8L2 ENTREZGENE, UniProtKB/TrEMBL
  K9J4P1_PIG UniProtKB/TrEMBL
VGNC ID VGNC:87758 ENTREZGENE