LOC100624218 (MORN repeat-containing protein 1)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Gene: LOC100624218 (MORN repeat-containing protein 1) Sus scrofa

Analyze

Symbol:

LOC100624218 (Ensembl: MORN1)

Name:

MORN repeat-containing protein 1 (Ensembl:MORN repeat containing 1)

RGD ID:

14037583

Description:

ASSOCIATED WITH chromosome 1p36 deletion syndrome (ortholog); dilated cardiomyopathy 1LL (ortholog); Ehlers-Danlos syndrome spondylodysplastic type 2 (ortholog); INTERACTS WITH deoxynivalenol

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

MORN repeat containing 1; MORN1

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MORN1 (MORN repeat containing 1)	HGNC	EggNOG, Ensembl, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Morn1 (MORN repeat containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Morn1 (MORN repeat containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Morn1 (MORN repeat containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	MORN1 (MORN repeat containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	MORN1 (MORN repeat containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Morn1 (MORN repeat containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	MORN1 (MORN repeat containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Morn1 (MORN repeat containing 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	64,253,268 - 64,300,897 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	64,266,184 - 64,300,980 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	58,721,207 - 58,757,010 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

chromosome 1p36 deletion syndrome (ISO)

dilated cardiomyopathy 1LL (ISO)

Ehlers-Danlos syndrome spondylodysplastic type 2 (ISO)

genetic disease (ISO)

Goldberg-Shprintzen syndrome (ISO)

idiopathic generalized epilepsy (ISO)

immunodeficiency 16 (ISO)

immunodeficiency 38 (ISO)

Joubert syndrome 25 (ISO)

Neurodevelopmental Disorders (ISO)

Peroxisome Biogenesis Disorder, Complementation Group 7 (ISO)

polycystic ovary syndrome (ISO)

Shprintzen-Goldberg Craniosynostosis (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

deoxynivalenol (EXP)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

LOC100624218
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	64,253,268 - 64,300,897 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	64,266,184 - 64,300,980 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	58,721,207 - 58,757,010 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MORN1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	2,321,253 - 2,391,554 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	2,321,253 - 2,391,707 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	2,252,692 - 2,322,993 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	2,242,556 - 2,312,853 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	263,756 - 338,268 (+)	NCBI		Celera
Cytogenetic Map	1	p36.32	NCBI
HuRef	1	1,527,136 - 1,601,554 (-)	NCBI		HuRef
CHM1_1	1	2,238,943 - 2,310,019 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	1,757,185 - 1,830,823 (-)	NCBI		T2T-CHM13v2.0

Morn1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	155,167,771 - 155,229,964 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	155,171,034 - 155,229,962 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	155,083,643 - 155,145,507 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	155,086,577 - 155,145,505 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	154,460,686 - 154,519,616 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	153,930,377 - 153,989,307 (+)	NCBI		MGSCv36	mm8
Celera	4	157,359,013 - 157,419,112 (+)	NCBI		Celera
Cytogenetic Map	4	E2	NCBI
cM Map	4	86.17	NCBI

Morn1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	170,928,086 - 170,987,219 (+)	NCBI		GRCr8
mRatBN7.2	5	165,646,817 - 165,704,892 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	165,646,991 - 165,704,892 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	168,352,949 - 168,410,850 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	170,174,363 - 170,232,262 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	170,136,892 - 170,194,795 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	172,489,160 - 172,547,102 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	172,488,708 - 172,547,058 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	175,945,054 - 176,002,864 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	171,888,125 - 171,944,965 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	171,898,619 - 171,955,458 (+)	NCBI
Celera	5	163,852,763 - 163,910,639 (+)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

Morn1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955486	8,802,975 - 8,850,445 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955486	8,802,800 - 8,850,635 (+)	NCBI	ChiLan1.0	ChiLan1.0

MORN1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	225,864,623 - 225,940,755 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	224,525,567 - 224,606,413 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	1,040,735 - 1,109,847 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	2,184,025 - 2,257,031 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	2,185,815 - 2,257,031 (-)	Ensembl	panpan1.1		panPan2

MORN1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	57,227,265 - 57,275,292 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	57,227,315 - 57,277,669 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	57,303,718 - 57,354,889 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	57,429,439 - 57,480,615 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	57,429,463 - 57,480,320 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	57,420,684 - 57,471,883 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	57,313,070 - 57,364,240 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	57,702,680 - 57,753,876 (-)	NCBI		UU_Cfam_GSD_1.0

Morn1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	28,251,431 - 28,299,991 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936737	1,166,183 - 1,214,517 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MORN1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	129,163,876 - 129,231,520 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	129,169,893 - 129,231,604 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666054	33,514,514 - 33,580,411 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Morn1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624818	7,616,738 - 7,667,130 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624818	7,616,542 - 7,667,487 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in LOC100624218
504 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005655982	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005655983	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005655984	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005655985	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013988730	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000044	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK396953	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FP565908	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01031313	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000028272 ⟹ ENSSSCP00000025221

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	6	64,272,806 - 64,300,897 (-)	Ensembl

RefSeq Acc Id:

ENSSSCT00000069194 ⟹ ENSSSCP00000059669

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	6	64,252,360 - 64,255,564 (+)	Ensembl

RefSeq Acc Id:

ENSSSCT00000074883 ⟹ ENSSSCP00000063475

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	6	64,253,268 - 64,298,529 (-)	Ensembl

RefSeq Acc Id:

XM_005655982 ⟹ XP_005656039

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	64,266,184 - 64,300,980 (-)	NCBI

Sequence:

show sequence

TTGGTAACGCCCAGAAACTGAAACCAGGCCACGCCCCCCGCGACCAACGAGCCAATGGAGGAGG
GCTGTGAGGTTGCTAAGGGAAACCTCTAGCGGCAAGATGGCTTCTGCCAGGGAGGGGAGCACGA
ACTCCCGCCTGACAGACCGCGACCCGCCAGGGCGGCCACCGCAGGACGGTTACGGAGTCTACGT
TTACCCGAATTCCTTCTTTCGATACGAAGGAGAATGGAAAGGAGGCAAGAAACACGGGCGCGGG
AAGCTGCTGTTTAAGGACGGGAGCTACTACGAAGGCGAGTTCGCAGAGGGCGAGATCACGGGAG
AGGGCTGCCGGCACTGGGCCCTGTCAGGGAACACCTATACCGGACAGTTTGTGCTGGGAGAGCC
TCAAGGCCACGGCGTGATGAAGTACAAAGCCGGTGGACGTTACGAGGGAGAGCTGTCCCACGGC
ATGAGAGAAGGACACGGGCATCTGGTGGACGCAGATGGACAAGTGTACTGGGGGTCGTTCCACA
AGAACAAGCAGCACGGCCAGGGGCGGATGGTCTTCCGGAACGGAGATGAGTATGAAGGTGACTG
GGTCCAAGGCCAGCGCCAGGGCCATGGGGTGCTGCGCCGCGCCGACGGCTCCACCTACGAGGGC
CAGTGGCACAGGGGCGTCTTCAGTGGACTGGGCAACATGGCCCACTGCTCCGGGGTCGTCTACC
GAGGGATATGGATCAACGGCCACCCTGTGGCACGAGCCACCAGGATGGTGATCTTGGGCCCAGA
GATGATGGACGTGGTCCAAGGGTGCTCCCTCACGCTGACCGTCGAGCTGCAGCAGGACAATGGG
GAGATCGCCACGAGCGAGGACGGCCGGGTTCTGGAGATTTCCGCGGGCATCAGGTACGTGCAGC
TCGCAGCCTACTCGGACGTCAGCTTCTTCAGAGTGGACGACGGCCACACGCGGACCCCTATCCA
GACCCCGTTCGGGTTCCAGTGCATCCCCTACCCTCTGACCAGCTCCACGTCCGGGGCCCAGGAG
CCTGAAGCTGCCCTGGGAGGTGCCGGAGCCAACTCAGCCATCCCCAAGGAAGACCCCAGCGGCC
TGCCCGCCAGGACACGGGCGGCCCGCTGCCCTGAGGCCTGTCGGCGAGTGGAGCGAGGCTGTGC
CCAGTTCTCTGATGTCCGCCTCAGGCCCCCTCCGCCCGGGTACCACCCCATCCTCTTCCTGGAC
AGCCCCCTCGAGGGCGGGGGCAGACCCGGCGGCCCAGAGCCCGGGAGGACGGCACCCACAGCGC
AGGACCCGCCCGGAGGCAGCAGCCCACAGGAGCCAAGGTCAGCATGCCGTGGACACCTCTTGAT
GCCAGCTCAGGGCACACGTTGAAATAGCCACGTGAAAGAGCAGAGAGGCCTGTGAGCACAGACG
GAGCAACAAAACTCTAGGAAAACGAGAAACACGGAGTGGGCAGAGGGCCCGCAGAGCCGTCCTG
AGCTGCTGCGGCCGCCGACGCTCCCTGCAGTTAGCTTGCTCTCAGCTGGTGCCAGCGGGCATGG
GATGGACTGGGACGACGGAGGCTGGCGCGGCGTCAGCAGGCTGACAGGCCTTTCCTACTTACAA
GGTGGAGCTGGGATGCGCCGTTTCCAGGGGGAGGTGCCCTCCTTCTGCATTGTTCTGAGTCACG
GTTTGTGCATTAAATATGAAGCTCACTTTACACGA

hide sequence

RefSeq Acc Id:

XM_005655983 ⟹ XP_005656040

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	64,266,184 - 64,300,980 (-)	NCBI

Sequence:

show sequence

TTGGTAACGCCCAGAAACTGAAACCAGGCCACGCCCCCCGCGACCAACGAGCCAATGGAGGAGG
GCTGTGAGGTTGCTAAGGGAAACCTCTAGCGGCAAGATGGCTTCTGCCAGGGAGGGGAGCACGA
ACTCCCGCCTGACAGACCGCGACCCGCCAGGGCGGCCACCGCAGGACGGTTACGGAGTCTACGT
TTACCCGAATTCCTTCTTTCGATACGAAGGAGAATGGAAAGGAGGCAAGAAACACGGGCGCGGG
AAGCTGCTGTTTAAGGACGGGAGCTACTACGAAGGCGAGTTCGCAGAGGGCGAGATCACGGGAG
AGGGCTGCCGGCACTGGGCCCTGTCAGGGAACACCTATACCGGACAGTTTGTGCTGGGAGAGCC
TCAAGGCCACGGCGTGATGAAGTACAAAGCCGGTGGACGTTACGAGGGAGAGCTGTCCCACGGC
ATGAGAGAAGGACACGGGCATCTGGTGGACGCAGATGGACAAGTGTACTGGGGGTCGTTCCACA
AGAACAAGCAGCACGGCCAGGGGCGGATGGTCTTCCGGAACGGAGATGAGTATGAAGGTGACTG
GGTCCAAGGCCAGCGCCAGGGCCATGGGGTGCTGCGCCGCGCCGACGGCTCCACCTACGAGGGC
CAGTGGCACAGGGGCGTCTTCAGTGGACTGGGCAACATGGCCCACTGCTCCGGGGTCGTCTACC
GAGGGATATGGATCAACGGCCACCCTGTGGCACGAGCCACCAGGATGGTGATCTTGGGCCCAGA
GATGATGGACGTGGTCCAAGGGTGCTCCCTCACGCTGACCGTCGAGCTGCAGCAGGACAATGGG
GAGATCGCCACGAGCGAGGACGGCCGGGTTCTGGAGATTTCCGCGGGCATCAGGTACGTGCAGC
TCGCAGCCTACTCGGACGTCAGCTTCTTCAGAGTGGACGACGGCCACACGCGGACCCCTATCCA
GACCCCGTTCTCCACGTCCGGGGCCCAGGAGCCTGAAGCTGCCCTGGGAGGTGCCGGAGCCAAC
TCAGCCATCCCCAAGGAAGACCCCAGCGGCCTGCCCGCCAGGACACGGGCGGCCCGCTGCCCTG
AGGCCTGTCGGCGAGTGGAGCGAGGCTGTGCCCAGTTCTCTGATGTCCGCCTCAGGCCCCCTCC
GCCCGGGTACCACCCCATCCTCTTCCTGGACAGCCCCCTCGAGGGCGGGGGCAGACCCGGCGGC
CCAGAGCCCGGGAGGACGGCACCCACAGCGCAGGACCCGCCCGGAGGCAGCAGCCCACAGGAGC
CAAGGTCAGCATGCCGTGGACACCTCTTGATGCCAGCTCAGGGCACACGTTGAAATAGCCACGT
GAAAGAGCAGAGAGGCCTGTGAGCACAGACGGAGCAACAAAACTCTAGGAAAACGAGAAACACG
GAGTGGGCAGAGGGCCCGCAGAGCCGTCCTGAGCTGCTGCGGCCGCCGACGCTCCCTGCAGTTA
GCTTGCTCTCAGCTGGTGCCAGCGGGCATGGGATGGACTGGGACGACGGAGGCTGGCGCGGCGT
CAGCAGGCTGACAGGCCTTTCCTACTTACAAGGTGGAGCTGGGATGCGCCGTTTCCAGGGGGAG
GTGCCCTCCTTCTGCATTGTTCTGAGTCACGGTTTGTGCATTAAATATGAAGCTCACTTTACAC
GA

hide sequence

RefSeq Acc Id:

XM_005655984 ⟹ XP_005656041

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	64,266,184 - 64,300,980 (-)	NCBI

Sequence:

show sequence

TTGGTAACGCCCAGAAACTGAAACCAGGCCACGCCCCCCGCGACCAACGAGCCAATGGAGGAGG
GCTGTGAGGTTGCTAAGGGAAACCTCTAGCGGCAAGATGGCTTCTGCCAGGGAGGGGAGCACGA
ACTCCCGCCTGACAGACCGCGACCCGCCAGGGCGGCCACCGCAGGACGGTTACGGAGTCTACGT
TTACCCGAATTCCTTCTTTCGATACGAAGGAGAATGGAAAGGAGGCAAGAAACACGGGAACACC
TATACCGGACAGTTTGTGCTGGGAGAGCCTCAAGGCCACGGCGTGATGAAGTACAAAGCCGGTG
GACGTTACGAGGGAGAGCTGTCCCACGGCATGAGAGAAGGACACGGGCATCTGGTGGACGCAGA
TGGACAAGTGTACTGGGGGTCGTTCCACAAGAACAAGCAGCACGGCCAGGGGCGGATGGTCTTC
CGGAACGGAGATGAGTATGAAGGTGACTGGGTCCAAGGCCAGCGCCAGGGCCATGGGGTGCTGC
GCCGCGCCGACGGCTCCACCTACGAGGGCCAGTGGCACAGGGGCGTCTTCAGTGGACTGGGCAA
CATGGCCCACTGCTCCGGGGTCGTCTACCGAGGGATATGGATCAACGGCCACCCTGTGGCACGA
GCCACCAGGATGGTGATCTTGGGCCCAGAGATGATGGACGTGGTCCAAGGGTGCTCCCTCACGC
TGACCGTCGAGCTGCAGCAGGACAATGGGGAGATCGCCACGAGCGAGGACGGCCGGGTTCTGGA
GATTTCCGCGGGCATCAGGTACGTGCAGCTCGCAGCCTACTCGGACGTCAGCTTCTTCAGAGTG
GACGACGGCCACACGCGGACCCCTATCCAGACCCCGTTCGGGTTCCAGTGCATCCCCTACCCTC
TGACCAGCTCCACGTCCGGGGCCCAGGAGCCTGAAGCTGCCCTGGGAGGTGCCGGAGCCAACTC
AGCCATCCCCAAGGAAGACCCCAGCGGCCTGCCCGCCAGGACACGGGCGGCCCGCTGCCCTGAG
GCCTGTCGGCGAGTGGAGCGAGGCTGTGCCCAGTTCTCTGATGTCCGCCTCAGGCCCCCTCCGC
CCGGGTACCACCCCATCCTCTTCCTGGACAGCCCCCTCGAGGGCGGGGGCAGACCCGGCGGCCC
AGAGCCCGGGAGGACGGCACCCACAGCGCAGGACCCGCCCGGAGGCAGCAGCCCACAGGAGCCA
AGGTCAGCATGCCGTGGACACCTCTTGATGCCAGCTCAGGGCACACGTTGAAATAGCCACGTGA
AAGAGCAGAGAGGCCTGTGAGCACAGACGGAGCAACAAAACTCTAGGAAAACGAGAAACACGGA
GTGGGCAGAGGGCCCGCAGAGCCGTCCTGAGCTGCTGCGGCCGCCGACGCTCCCTGCAGTTAGC
TTGCTCTCAGCTGGTGCCAGCGGGCATGGGATGGACTGGGACGACGGAGGCTGGCGCGGCGTCA
GCAGGCTGACAGGCCTTTCCTACTTACAAGGTGGAGCTGGGATGCGCCGTTTCCAGGGGGAGGT
GCCCTCCTTCTGCATTGTTCTGAGTCACGGTTTGTGCATTAAATATGAAGCTCACTTTACACGA

hide sequence

RefSeq Acc Id:

XM_005655985 ⟹ XP_005656042

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	64,272,805 - 64,300,980 (-)	NCBI

Sequence:

show sequence

TTGGTAACGCCCAGAAACTGAAACCAGGCCACGCCCCCCGCGACCAACGAGCCAATGGAGGAGG
GCTGTGAGGTTGCTAAGGGAAACCTCTAGCGGCAAGATGGCTTCTGCCAGGGAGGGGAGCACGA
ACTCCCGCCTGACAGACCGCGACCCGCCAGGGCGGCCACCGCAGGACGGTTACGGAGTCTACGT
TTACCCGAATTCCTTCTTTCGATACGAAGGAGAATGGAAAGGAGGCAAGAAACACGGGCGCGGG
AAGCTGCTGTTTAAGGACGGGAGCTACTACGAAGGCGAGTTCGCAGAGGGCGAGATCACGGGAG
AGGGCTGCCGGCACTGGGCCCTGTCAGGGAACACCTATACCGGACAGTTTGTGCTGGGAGAGCC
TCAAGGCCACGGCGTGATGAAGTACAAAGCCGGTGGACGTTACGAGGGAGAGCTGTCCCACGGC
ATGAGAGAAGGACACGGGCATCTGGTGGACGCAGATGGACAAGTGTACTGGGGGTCGTTCCACA
AGAACAAGCAGCACGGCCAGGGGCGGATGGTCTTCCGGAACGGAGATGAGTATGAAGGTGACTG
GGTCCAAGGCCAGCGCCAGGGCCATGGGGTGCTGCGCCGCGCCGACGGCTCCACCTACGAGGGC
CAGTGGCACAGGGGCGTCTTCAGTGGACTGGGCAACATGGCCCACTGCTCCGGGGTCGTCTACC
GAGGGATATGGATCAACGGCCACCCTGTGGCACGAGCCACCAGGATGGTGATCTTGGGCCCAGA
GATGATGGACGTGGTCCAAGGGTGCTCCCTCACGCTGACCGTCGAGCTGCAGCAGGACAATGGG
GAGATCGCCACGAGCGAGGACGGCCGGGTTCTGGAGATTTCCGCGGGCATCAGGTACGTGCAGC
TCGCAGCCTACTCGGACGTCAGCTTCTTCAGAGTGGACGACGGCCACACGCGGACCCCTATCCA
GACCCCGTTCGGGTTCCAGTGCATCCCCTACCCTCTGACCAGCTCCACGTCCGGGGCCCAGGAG
CCTGAAGCTGCCCTGGGAGGTGCCGGAGCCAACTCAGCCATCCCCAAGGAAGACCCCAGCGGCC
TGCCCGGTGCTGGCAATTGCCAGGAGGACATTGTCAGGCCGGCTGAGCCCGGCAGCAACAGTCC
CCGGTAAACGGGATCTGGGGACCTAAAAACGCCACAGCCTCGAGAGAGAAGCCCGGCTCACTTT
TGGAGGCACAGAACCCTCCCCAGAAACGTTTCCATGGATCCTAGGGTCCCTCCTCCTCCCTGAA
CTGCGCTTCTGAGCGCCCTTCAGGCGGGATATGGGGAACCACCACCCGCAGCCAAGAGAGGGTC
TTCCAAACCCAACCAAGGTGCCCTTTGCCGCCAACCCGGTCTTGCCAATAAAAGTGACAGAACG
TGTGGCA

hide sequence

RefSeq Acc Id:

XM_013988730 ⟹ XP_013844184

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	6	64,266,184 - 64,300,980 (-)	NCBI

Sequence:

show sequence

TTGGTAACGCCCAGAAACTGAAACCAGGCCACGCCCCCCGCGACCAACGAGCCAATGGAGGAGG
GCTGTGAGGTTGCTAAGGGAAACCTCTAGCGGCAAGATGGCTTCTGCCAGGGAGGGGAGCACGA
ACTCCCGCCTGACAGACCGCGACCCGCCAGGGCGGCCACCGCAGGACGGTTACGGAGTCTACGT
TTACCCGAATTCCTTCTTTCGATACGAAGGAGAATGGAAAGGAGGCAAGAAACACGGGCGCGGG
AAGCTGCTGTTTAAGGACGGGAGCTACTACGAAGGCGAGTTCGCAGAGGGCGAGATCACGGGAG
AGGGCTGCCGGCACTGGGCCCTGTCAGGGAACACCTATACCGGACAGTTTGTGCTGGGAGAGCC
TCAAGGCCACGGCGTGATGAAGTACAAAGCCGGTGGACGTTACGAGGGAGAGCTGTCCCACGGC
ATGAGAGAAGGACACGGGCATCTGGTGGACGCAGATGGACAAGTGTACTGGGGGTCGTTCCACA
AGAACAAGCAGCACGGCCAGGGGCGGATGGTCTTCCGGAACGGAGATGAGTATGAAGGTGACTG
GGTCCAAGGCCAGCGCCAGGGCCATGGGGTGCTGCGCCGCGCCGACGGCTCCACCTACGAGGGC
CAGTGGCACAGGGGCGTCTTCAGTGGACTGGGCAACATGGCCCACTGCTCCGGGGTCGTCTACC
GAGGGATATGGATCAACGGCCACCCTGTGGCACGAGCCACCAGGATGGTGATCTTGGGCCCAGA
GATGATGGACGTGGTCCAAGGGTGCTCCCTCACGCTGACCGTCGAGCTGCAGCAGGACAATGGG
GAGATCGCCACGAGCGAGGACGGCCGGGTTCTGGAGATTTCCGCGGGCATCAGGTACGTGCAGC
TCGCAGCCTACTCGGACGTCAGCTTCTTCAGAGTGGACGACGGCCACACGCGGACCCCTATCCA
GACCCCGTTCGGGTTCCAGTGCATCCCCTACCCTCTGACCAGCTCCACGTCCGGGGCCCAGGAG
CCTGAAGCTGCCCTGGGAGGTGCCGGAGCCAACTCAGCCATCCCCAAGGAAGACCCCAGCGGCC
TGCCCGCCAGGACACGGGCGGCCCGCTGCCCTGAGGCCTGTCGGCGAGTGGAGCGAGGCTGTGC
CCAGTTCTCTGATGTCCGCCTCAGGCCCCCTCCGCCCGGGTACCACCCCATCCTCTTCCTGGAC
AGCCCCCTCGAGGGCGGGGGCAGACCCGGCGGCCCAGAGCCCGGGAGGACGGCACCCACAGCGC
AGGACCCGCCCGGAGGCAGCAGGTAGGCCAGGGCACCTCTCATGGGCTTGGGGCTCGGTTGGAC
CGCTTATCCGCTGGGCCCCTCTCCGCTCACCTGCCCCGACTCCTCTGGGGCCTGGGACGGCACA
GACACCGCGAGCAAGGCTCGGCCTGCCCGGGACTGCACACACTTCCTGAACCCAGGGCCTCGCC
TGGGATGGGGCAGCGCGAGTGGAGCCCACTCCTGCCCCGTGGCTGTCCTACTCGGGGACAAGGC
AGGCAGGGTGGAGCCGCCACAGGGGCCTGCGGGACCCTCGGGCATGTAGACAGAGGTTGGGGCC
CCACGGGGCAGGCACCACAGCCTGATGCTTTGTCTCTGCACATCTCACACGGGCTCAGGCCGCT
GTGGGCCGCCACACCCCTGGGGCCGCAACCAGCCTGTCCTGCAGAGAGACAGCAGCTGATCCGG
GCCAGGTTCAGGCTTCTGTCTGCCAGTGGTCAGAGCTGGTGCGTGGTCCCGTGGGCAGGTGAGG
GCACACAGGGACTTGCTCCTCCAGCCCCGACCCTGCCCTGCGGGCGGAAGCCTGGATTCCAGAG
AACTTTCCAAAGAGAACCTCCTACCCCCAACCCCCGCCGAGCCACGCAGCCCCAGAGGCTCAGG
TGGGACTGACCCTCACCTCCCCCTAGACCCCAAGCTCCGGGGAGCCCTCAGCCCAGGGCTGGCC
CCTCCTGAGGCCACCCGAGGCCTCCTTTGCAGATAGAACCTGTAGGGTGTGGCCAAGTGGAGCC
AACTTGGGCCAGAAGCAGGATGTGCTGGCAACTTGGCCATGGACTCCAAGAAAAAAATCACGGC
TTTTGAAAGACAGGCTGGGTGAGGCAGGAGGACATCGCCGCTCAAGTGAAAGAGAAGGGCCTCA
GCCAGGGCGGGGTGCCAGGCCCTCCAAGATGCCCGCCTGCCACCAAAGCCCGGCCTCCGACCTG
AGCGTGAGGCCCATCAGCCCACAGGAGCCAAGGTCAGCATGCCGTGGACACCTCTTGATGCCAG
CTCAGGGCACACGTTGAAATAGCCACGTGAAAGAGCAGAGAGGCCTGTGAGCACAGACGGAGCA
ACAAAACTCTAGGAAAACGAGAAACACGGAGTGGGCAGAGGGCCCGCAGAGCCGTCCTGAGCTG
CTGCGGCCGCCGACGCTCCCTGCAGTTAGCTTGCTCTCAGCTGGTGCCAGCGGGCATGGGATGG
ACTGGGACGACGGAGGCTGGCGCGGCGTCAGCAGGCTGACAGGCCTTTCCTACTTACAAGGTGG
AGCTGGGATGCGCCGTTTCCAGGGGGAGGTGCCCTCCTTCTGCATTGTTCTGAGTCACGGTTTG
TGCATTAAATATGAAGCTCACTTTACACGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005656039	(Get FASTA)	NCBI Sequence Viewer
	XP_005656040	(Get FASTA)	NCBI Sequence Viewer
	XP_005656041	(Get FASTA)	NCBI Sequence Viewer
	XP_005656042	(Get FASTA)	NCBI Sequence Viewer
	XP_013844184	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000025221.4
	ENSSSCP00030008523.1
	ENSSSCP00030008527.1
	ENSSSCP00045026293.1

RefSeq Acc Id:

XP_005656041 ⟸ XM_005655984

- Peptide Label:

isoform X4

- Sequence:

show sequence

MASAREGSTNSRLTDRDPPGRPPQDGYGVYVYPNSFFRYEGEWKGGKKHGNTYTGQFVLGEPQG
HGVMKYKAGGRYEGELSHGMREGHGHLVDADGQVYWGSFHKNKQHGQGRMVFRNGDEYEGDWVQ
GQRQGHGVLRRADGSTYEGQWHRGVFSGLGNMAHCSGVVYRGIWINGHPVARATRMVILGPEMM
DVVQGCSLTLTVELQQDNGEIATSEDGRVLEISAGIRYVQLAAYSDVSFFRVDDGHTRTPIQTP
FGFQCIPYPLTSSTSGAQEPEAALGGAGANSAIPKEDPSGLPARTRAARCPEACRRVERGCAQF
SDVRLRPPPPGYHPILFLDSPLEGGGRPGGPEPGRTAPTAQDPPGGSSPQEPRSACRGHLLMPA
QGTR

hide sequence

RefSeq Acc Id:	XP_005656040 ⟸ XM_005655983
- Peptide Label:	isoform X2
- UniProtKB:	A0A8D0VMK6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASAREGSTNSRLTDRDPPGRPPQDGYGVYVYPNSFFRYEGEWKGGKKHGRGKLLFKDGSYYEG EFAEGEITGEGCRHWALSGNTYTGQFVLGEPQGHGVMKYKAGGRYEGELSHGMREGHGHLVDAD GQVYWGSFHKNKQHGQGRMVFRNGDEYEGDWVQGQRQGHGVLRRADGSTYEGQWHRGVFSGLGN MAHCSGVVYRGIWINGHPVARATRMVILGPEMMDVVQGCSLTLTVELQQDNGEIATSEDGRVLE ISAGIRYVQLAAYSDVSFFRVDDGHTRTPIQTPFSTSGAQEPEAALGGAGANSAIPKEDPSGLP ARTRAARCPEACRRVERGCAQFSDVRLRPPPPGYHPILFLDSPLEGGGRPGGPEPGRTAPTAQD PPGGSSPQEPRSACRGHLLMPAQGTR hide sequence

RefSeq Acc Id:	XP_005656039 ⟸ XM_005655982
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D0VMK6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASAREGSTNSRLTDRDPPGRPPQDGYGVYVYPNSFFRYEGEWKGGKKHGRGKLLFKDGSYYEG EFAEGEITGEGCRHWALSGNTYTGQFVLGEPQGHGVMKYKAGGRYEGELSHGMREGHGHLVDAD GQVYWGSFHKNKQHGQGRMVFRNGDEYEGDWVQGQRQGHGVLRRADGSTYEGQWHRGVFSGLGN MAHCSGVVYRGIWINGHPVARATRMVILGPEMMDVVQGCSLTLTVELQQDNGEIATSEDGRVLE ISAGIRYVQLAAYSDVSFFRVDDGHTRTPIQTPFGFQCIPYPLTSSTSGAQEPEAALGGAGANS AIPKEDPSGLPARTRAARCPEACRRVERGCAQFSDVRLRPPPPGYHPILFLDSPLEGGGRPGGP EPGRTAPTAQDPPGGSSPQEPRSACRGHLLMPAQGTR hide sequence

RefSeq Acc Id:	XP_013844184 ⟸ XM_013988730
- Peptide Label:	isoform X3
- UniProtKB:	A0A8D0VMK6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASAREGSTNSRLTDRDPPGRPPQDGYGVYVYPNSFFRYEGEWKGGKKHGRGKLLFKDGSYYEG EFAEGEITGEGCRHWALSGNTYTGQFVLGEPQGHGVMKYKAGGRYEGELSHGMREGHGHLVDAD GQVYWGSFHKNKQHGQGRMVFRNGDEYEGDWVQGQRQGHGVLRRADGSTYEGQWHRGVFSGLGN MAHCSGVVYRGIWINGHPVARATRMVILGPEMMDVVQGCSLTLTVELQQDNGEIATSEDGRVLE ISAGIRYVQLAAYSDVSFFRVDDGHTRTPIQTPFGFQCIPYPLTSSTSGAQEPEAALGGAGANS AIPKEDPSGLPARTRAARCPEACRRVERGCAQFSDVRLRPPPPGYHPILFLDSPLEGGGRPGGP EPGRTAPTAQDPPGGSR hide sequence

RefSeq Acc Id:	XP_005656042 ⟸ XM_005655985
- Peptide Label:	isoform X5
- UniProtKB:	A0A8D0VNJ2 (UniProtKB/TrEMBL), A0A8D1HXH5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASAREGSTNSRLTDRDPPGRPPQDGYGVYVYPNSFFRYEGEWKGGKKHGRGKLLFKDGSYYEG EFAEGEITGEGCRHWALSGNTYTGQFVLGEPQGHGVMKYKAGGRYEGELSHGMREGHGHLVDAD GQVYWGSFHKNKQHGQGRMVFRNGDEYEGDWVQGQRQGHGVLRRADGSTYEGQWHRGVFSGLGN MAHCSGVVYRGIWINGHPVARATRMVILGPEMMDVVQGCSLTLTVELQQDNGEIATSEDGRVLE ISAGIRYVQLAAYSDVSFFRVDDGHTRTPIQTPFGFQCIPYPLTSSTSGAQEPEAALGGAGANS AIPKEDPSGLPGAGNCQEDIVRPAEPGSNSPR hide sequence

RefSeq Acc Id:

ENSSSCP00000063475 ⟸ ENSSSCT00000074883

RefSeq Acc Id:

ENSSSCP00000059669 ⟸ ENSSSCT00000069194

RefSeq Acc Id:

ENSSSCP00000025221 ⟸ ENSSSCT00000028272

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000028706	Ensembl
	ENSSSCG00000060855	UniProtKB/TrEMBL
	ENSSSCG00030013927	UniProtKB/TrEMBL
	ENSSSCG00045022136	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000028272.4	UniProtKB/TrEMBL
	ENSSSCT00030019143.1	UniProtKB/TrEMBL
	ENSSSCT00030019151.1	UniProtKB/TrEMBL
	ENSSSCT00045037828.1	UniProtKB/TrEMBL
Gene3D-CATH	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain	UniProtKB/TrEMBL
InterPro	MORN	UniProtKB/TrEMBL
NCBI Gene	LOC100624218	ENTREZGENE
PANTHER	MORN REPEAT-CONTAINING PROTEIN 1	UniProtKB/TrEMBL
	PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED	UniProtKB/TrEMBL
Pfam	MORN	UniProtKB/TrEMBL
SMART	MORN	UniProtKB/TrEMBL
Superfamily-SCOP	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain	UniProtKB/TrEMBL
UniProt	A0A8D0VMK6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0VNJ2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1HXH5	ENTREZGENE, UniProtKB/TrEMBL
	I3LMA0_PIG	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

alimentary part of gastrointestinal system

endocrine system

hemolymphoid system

nervous system

renal system

reproductive system

Below cutoff