ADGRF5 (adhesion G protein-coupled receptor F5) - Rat Genome Database

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Gene: ADGRF5 (adhesion G protein-coupled receptor F5) Sus scrofa
Analyze
Symbol: ADGRF5
Name: adhesion G protein-coupled receptor F5
RGD ID: 14034294
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); INVOLVED IN energy reserve metabolic process (ortholog); erythrocyte development (ortholog); fat cell differentiation (ortholog); FOUND IN apical part of cell (inferred); cell surface (inferred); cytoplasmic vesicle (inferred)
Type: protein-coding
RefSeq Status: MODEL
Also known as: G protein-coupled receptor 116; GPR116; LOW QUALITY PROTEIN: adhesion G protein-coupled receptor F5
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl741,640,258 - 41,769,286 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1741,640,256 - 41,769,422 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2748,301,437 - 48,429,345 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:14681463   PMID:17145712  


Genomics

Comparative Map Data
ADGRF5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl741,640,258 - 41,769,286 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1741,640,256 - 41,769,422 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2748,301,437 - 48,429,345 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ADGRF5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl646,852,522 - 46,954,943 (-)EnsemblGRCh38hg38GRCh38
GRCh38646,852,522 - 46,954,954 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37646,820,259 - 46,922,676 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36646,928,201 - 47,030,634 (-)NCBINCBI36hg18NCBI36
Build 34646,928,297 - 46,990,825NCBI
Celera648,372,598 - 48,475,024 (-)NCBI
Cytogenetic Map6p12.3NCBI
HuRef646,543,478 - 46,645,785 (-)NCBIHuRef
CHM1_1646,823,487 - 46,925,912 (-)NCBICHM1_1
Adgrf5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391743,671,224 - 43,770,448 (+)NCBIGRCm39mm39
GRCm39 Ensembl1743,671,342 - 43,770,448 (+)Ensembl
GRCm381743,360,329 - 43,459,557 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1743,360,451 - 43,459,557 (+)EnsemblGRCm38mm10GRCm38
MGSCv371743,526,415 - 43,596,506 (+)NCBIGRCm37mm9NCBIm37
MGSCv361742,825,075 - 42,924,198 (+)NCBImm8
Celera1746,814,258 - 46,884,453 (+)NCBICelera
Cytogenetic Map17B3NCBI
Adgrf5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2917,517,596 - 17,624,107 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl917,520,009 - 17,623,968 (-)Ensembl
Rnor_6.0920,091,121 - 20,195,706 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl920,091,099 - 20,195,566 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0918,967,333 - 19,071,668 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4913,217,956 - 13,323,415 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1913,215,277 - 13,320,737 (-)NCBI
Celera915,237,160 - 15,339,123 (-)NCBICelera
Cytogenetic Map9q13NCBI
Adgrf5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543711,639,891 - 11,688,257 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543711,639,555 - 11,710,362 (-)NCBIChiLan1.0ChiLan1.0
ADGRF5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1647,703,158 - 47,805,347 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl647,700,570 - 47,772,510 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0646,438,128 - 46,540,325 (-)NCBIMhudiblu_PPA_v0panPan3
ADGRF5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11215,013,567 - 15,115,889 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1215,006,949 - 15,086,116 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1215,045,001 - 15,147,394 (-)NCBI
ROS_Cfam_1.01215,510,094 - 15,612,365 (-)NCBI
UMICH_Zoey_3.11215,024,852 - 15,127,029 (-)NCBI
UNSW_CanFamBas_1.01215,117,916 - 15,219,946 (-)NCBI
UU_Cfam_GSD_1.01215,263,867 - 15,336,692 (-)NCBI
Adgrf5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494650,457,310 - 50,546,121 (-)NCBI
SpeTri2.0NW_00493647613,414,087 - 13,503,926 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ADGRF5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11725,323,613 - 25,427,370 (+)NCBI
ChlSab1.1 Ensembl1725,356,427 - 25,430,061 (+)Ensembl
Vero_WHO_p1.0NW_02366604446,866,043 - 46,976,173 (-)NCBI
Adgrf5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475413,778,573 - 13,843,931 (+)NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 3 3 2 2
Low 9 1 3 2 23 3 1
Below cutoff 1

Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000001929   ⟹   ENSSSCP00000001882
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl741,640,258 - 41,769,286 (-)Ensembl
RefSeq Acc Id: XM_013978015   ⟹   XP_013833469
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1741,640,256 - 41,769,422 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013833469 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_013833469   ⟸   XM_013978015
- Sequence:
RefSeq Acc Id: ENSSSCP00000001882   ⟸   ENSSSCT00000001929
Protein Domains
G_PROTEIN_RECEP_F2_4   GPS   Ig-like   SEA


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000001725 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSSSCP00000001882 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000001929 ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro GPCR_2-like UniProtKB/TrEMBL
  GPCR_2_Ig-hepta-like_rcpt UniProtKB/TrEMBL
  GPCR_2_secretin-like UniProtKB/TrEMBL
  GPCR_2_secretin-like_CS UniProtKB/TrEMBL
  GPS UniProtKB/TrEMBL
  Ig-like_dom UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Ig_sub UniProtKB/TrEMBL
  Ig_sub2 UniProtKB/TrEMBL
  SEA_dom UniProtKB/TrEMBL
  SEA_dom_sf UniProtKB/TrEMBL
NCBI Gene ADGRF5 ENTREZGENE
Pfam 7tm_2 UniProtKB/TrEMBL
  GPS UniProtKB/TrEMBL
  SEA UniProtKB/TrEMBL
PRINTS GPCRSECRETIN UniProtKB/TrEMBL
  IGHEPTARCPTR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F2_2 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F2_4 UniProtKB/TrEMBL
  GPS UniProtKB/TrEMBL
  IG_LIKE UniProtKB/TrEMBL
  SEA UniProtKB/TrEMBL
SMART GPS UniProtKB/TrEMBL
  IGc2 UniProtKB/TrEMBL
  SM00409 UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/TrEMBL
  SSF82671 UniProtKB/TrEMBL
UniProt F1RQ17_PIG UniProtKB/TrEMBL