Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: PDE6C (phosphodiesterase 6C) Sus scrofa
Analyze
Symbol: PDE6C
Name: phosphodiesterase 6C
Description: ENCODES a protein that exhibits 3',5'-cyclic-nucleotide phosphodiesterase activity (inferred); G protein-coupled receptor activity (inferred); metal ion binding (inferred); INVOLVED IN brown fat cell differentiation (inferred); detection of chemical stimulus involved in sensory perception of taste (inferred); G protein-coupled receptor signaling pathway (inferred); PARTICIPATES IN purine metabolic pathway; visual phototransduction pathway; ASSOCIATED WITH achromatopsia (ortholog); Achromatopsia 5 (ortholog); amphetamine abuse (ortholog); FOUND IN cilium (inferred); endocytic vesicle (inferred); integral component of membrane (inferred); INTERACTS WITH 3',5'-cyclic GMP
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha'; G protein-coupled receptor 120; GPR120; O3FAR1; omega-3 fatty acid receptor 1
Orthologs:
Homo sapiens (human) : PDE6C (phosphodiesterase 6C)  HGNC  Alliance
Mus musculus (house mouse) : Pde6c (phosphodiesterase 6C, cGMP specific, cone, alpha prime)  MGI  Alliance
Rattus norvegicus (Norway rat) : Pde6c (phosphodiesterase 6C)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pde6c (phosphodiesterase 6C)
Pan paniscus (bonobo/pygmy chimpanzee) : PDE6C (phosphodiesterase 6C)
Canis lupus familiaris (dog) : PDE6C (phosphodiesterase 6C)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pde6c (phosphodiesterase 6C)
Chlorocebus sabaeus (African green monkey) : PDE6C (phosphodiesterase 6C)
Heterocephalus glaber (naked mole-rat) : Pde6c (phosphodiesterase 6C)
more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14105,051,920 - 105,123,022 (+)Ensembl
Sscrofa11.1 Ensembl14105,011,922 - 105,037,498 (+)Ensembl
Sscrofa11.114105,010,974 - 105,122,628 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214114,743,150 - 114,854,527 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - uncurated

Genomics

Comparative Map Data

Expression


Sequence

Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
 
More on PDE6C
NCBI Gene
Ensembl Gene
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 14028181
Created: 2019-01-29
Species: Sus scrofa
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.