OR10AC1 (olfactory receptor family 10 subfamily AC member 1) - Rat Genome Database

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Gene: OR10AC1 (olfactory receptor family 10 subfamily AC member 1) Sus scrofa
Analyze
Symbol: OR10AC1
Name: olfactory receptor family 10 subfamily AC member 1
RGD ID: 14027288
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of smell (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC110257586; olfactory receptor 10AC1-like
RGD Orthologs
Human
Mouse
Rat
Dog
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1186,757,179 - 6,758,503 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
membrane  (IEA)
plasma membrane  (IBA,IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
OR10AC1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1186,757,179 - 6,758,503 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
OR10AC1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387143,510,867 - 143,512,011 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7143,509,256 - 143,519,469 (-)EnsemblGRCh38hg38GRCh38
GRCh377143,207,960 - 143,209,104 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 367142,917,948 - 142,919,326 (-)NCBINCBI36Build 36hg18NCBI36
Celera7138,045,062 - 138,046,440 (-)NCBICelera
Cytogenetic Map7q35NCBI
HuRef7137,545,110 - 137,546,054 (-)NCBIHuRef
CHM1_17143,145,014 - 143,145,957 (-)NCBICHM1_1
T2T-CHM13v2.07144,866,250 - 144,867,393 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27142,610,159 - 142,611,103 (-)NCBI
Or10ac1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39642,515,001 - 42,515,954 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl642,512,598 - 42,524,521 (-)EnsemblGRCm39 Ensembl
GRCm38642,538,067 - 42,539,020 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl642,535,664 - 42,547,587 (-)EnsemblGRCm38mm10GRCm38
MGSCv37642,488,066 - 42,489,019 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36642,467,674 - 42,469,051 (-)NCBIMGSCv36mm8
Celera642,482,930 - 42,483,935 (-)NCBICelera
Cytogenetic Map6B2.1NCBI
cM Map620.77NCBI
Or10ac1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8472,416,985 - 72,417,938 (-)NCBIGRCr8
mRatBN7.2471,450,363 - 71,451,316 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl471,450,363 - 71,451,316 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx476,376,926 - 76,377,879 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0472,290,166 - 72,291,119 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0470,706,417 - 70,707,370 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0471,955,640 - 71,969,446 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl471,957,821 - 71,958,774 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04136,752,557 - 136,753,510 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4470,336,682 - 70,337,635 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1470,612,811 - 70,613,765 (-)NCBI
Celera466,373,424 - 66,374,377 (-)NCBICelera
Cytogenetic Map4q24NCBI
OR10AC1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1166,188,097 - 6,189,062 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl166,188,460 - 6,189,240 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha167,177,091 - 7,178,056 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0166,041,704 - 6,042,669 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1165,989,729 - 5,990,694 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0165,840,117 - 5,841,082 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0165,916,420 - 5,917,385 (+)NCBIUU_Cfam_GSD_1.0

Variants

.
Variants in OR10AC1
44 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

nervous system
High
Medium
Low 1
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021079022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_021079022   ⟹   XP_020934681
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1186,757,179 - 6,758,503 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_020934681   ⟸   XM_021079022
- UniProtKB: A0A4X1UYE6 (UniProtKB/TrEMBL),   A0A287BNB3 (UniProtKB/TrEMBL),   A0A8D1VGE5 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000036539 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00025066576 UniProtKB/TrEMBL
  ENSSSCG00035023059 UniProtKB/TrEMBL
  ENSSSCG00045000964 UniProtKB/TrEMBL
  ENSSSCG00055022129 UniProtKB/TrEMBL
  ENSSSCG00060041488 UniProtKB/TrEMBL
  ENSSSCG00065071712 UniProtKB/TrEMBL
  ENSSSCG00070020587 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000046913 ENTREZGENE
  ENSSSCT00000046913.2 UniProtKB/TrEMBL
  ENSSSCT00025091415.1 UniProtKB/TrEMBL
  ENSSSCT00035030169.1 UniProtKB/TrEMBL
  ENSSSCT00045001424.1 UniProtKB/TrEMBL
  ENSSSCT00055043409.1 UniProtKB/TrEMBL
  ENSSSCT00060056229.1 UniProtKB/TrEMBL
  ENSSSCT00065098534.1 UniProtKB/TrEMBL
  ENSSSCT00070040923.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
NCBI Gene LOC110257586 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 10AC1 UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A287BNB3 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1UYE6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1VGE5 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:112586 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-10-23 OR10AC1  olfactory receptor family 10 subfamily AC member 1  LOC110257586  olfactory receptor 10AC1-like  Symbol and/or name change 19259463 PROVISIONAL