LOC100511211 (olfactory receptor 6-like) - Rat Genome Database

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Pathways
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Gene: LOC100511211 (olfactory receptor 6-like) Sus scrofa
Analyze
Symbol: LOC100511211
Name: olfactory receptor 6-like
RGD ID: 14025441
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); odorant binding (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of smell (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.192,718,937 - 2,724,492 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.293,423,646 - 3,424,740 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Variants

.
Variants in LOC100511211
228 total Variants

Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021062318 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_021062318   ⟹   XP_020917977
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.192,718,937 - 2,724,492 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_020917977   ⟸   XM_021062318
- UniProtKB: A0A287AGM4 (UniProtKB/TrEMBL),   A0A8D1PAI1 (UniProtKB/TrEMBL),   A0A8D0RS25 (UniProtKB/TrEMBL),   A0A8D1PAB1 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000059395 ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00025036354 UniProtKB/TrEMBL
  ENSSSCG00025036505 UniProtKB/TrEMBL
  ENSSSCG00035002160 UniProtKB/TrEMBL
  ENSSSCG00035002228 UniProtKB/TrEMBL
  ENSSSCG00040037473 UniProtKB/TrEMBL
  ENSSSCG00045039062 UniProtKB/TrEMBL
  ENSSSCG00055002243 UniProtKB/TrEMBL
  ENSSSCG00055002254 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000049862 ENTREZGENE
  ENSSSCT00000049862.2 UniProtKB/TrEMBL
  ENSSSCT00025049522.1 UniProtKB/TrEMBL
  ENSSSCT00025049706.1 UniProtKB/TrEMBL
  ENSSSCT00035002694.1 UniProtKB/TrEMBL
  ENSSSCT00035002781.1 UniProtKB/TrEMBL
  ENSSSCT00040050122.1 UniProtKB/TrEMBL
  ENSSSCT00045067896.1 UniProtKB/TrEMBL
  ENSSSCT00055004227.1 UniProtKB/TrEMBL
  ENSSSCT00055004254.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
NCBI Gene LOC100511211 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A287AGM4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0RS25 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1PAB1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1PAI1 ENTREZGENE, UniProtKB/TrEMBL