MN1 (MN1 proto-oncogene, transcriptional regulator) - Rat Genome Database

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Gene: MN1 (MN1 proto-oncogene, transcriptional regulator) Sus scrofa
Analyze
Symbol: MN1
Name: MN1 proto-oncogene, transcriptional regulator
RGD ID: 14022625
Description: INVOLVED IN intramembranous ossification (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); CEBALID Syndrome (ortholog); FOUND IN nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOW QUALITY PROTEIN: transcriptional activator MN1; meningioma (disrupted in balanced translocation) 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1445,096,485 - 45,140,570 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11445,093,660 - 45,142,476 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21447,943,781 - 47,990,706 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
nucleus  (IEA)

Molecular Function

References

Genomics

Comparative Map Data
MN1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1445,096,485 - 45,140,570 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11445,093,660 - 45,142,476 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21447,943,781 - 47,990,706 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MN1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2227,748,277 - 27,801,756 (-)EnsemblGRCh38hg38GRCh38
GRCh382227,748,277 - 27,801,756 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh372228,144,265 - 28,197,744 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362226,474,265 - 26,527,486 (-)NCBINCBI36hg18NCBI36
Build 342226,468,819 - 26,522,040NCBI
Celera2211,944,239 - 11,997,449 (-)NCBI
Cytogenetic Map22q12.1ENTREZGENE
HuRef2211,108,458 - 11,161,677 (-)NCBIHuRef
CHM1_12228,103,532 - 28,156,750 (-)NCBICHM1_1
Mn1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395111,565,166 - 111,604,896 (+)NCBIGRCm39mm39
GRCm39 Ensembl5111,565,228 - 111,604,899 (+)Ensembl
GRCm385111,417,300 - 111,457,030 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5111,417,362 - 111,457,033 (+)EnsemblGRCm38mm10GRCm38
MGSCv375111,847,186 - 111,886,045 (+)NCBIGRCm37mm9NCBIm37
MGSCv365111,657,665 - 111,697,328 (+)NCBImm8
Celera5108,545,721 - 108,584,945 (+)NCBICelera
Cytogenetic Map5FNCBI
cM Map553.86NCBI
Mn1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21245,184,060 - 45,220,102 (-)NCBI
Rnor_6.0 Ensembl1251,214,192 - 51,250,230 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01251,214,192 - 51,250,230 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01252,955,948 - 52,991,986 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41245,318,155 - 45,355,115 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1246,751,609 - 46,787,208 (-)NCBICelera
Cytogenetic Map12q16NCBI
Mn1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554552,127,377 - 2,171,850 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554552,130,104 - 2,171,868 (-)NCBIChiLan1.0ChiLan1.0
MN1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12226,519,251 - 26,571,373 (-)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v0228,799,832 - 8,854,695 (-)NCBIMhudiblu_PPA_v0panPan3
MN1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12621,216,912 - 21,261,518 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2621,216,837 - 21,261,031 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2621,087,978 - 21,132,430 (-)NCBI
ROS_Cfam_1.02621,583,778 - 21,628,255 (-)NCBI
UMICH_Zoey_3.12621,301,607 - 21,346,030 (-)NCBI
UNSW_CanFamBas_1.02621,557,327 - 21,601,736 (-)NCBI
UU_Cfam_GSD_1.02621,626,045 - 21,670,478 (-)NCBI
Mn1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118113,804,928 - 113,846,405 (+)NCBI
SpeTri2.0NW_0049366572,024,302 - 2,066,196 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MN1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11910,652,940 - 10,706,989 (-)NCBI
ChlSab1.1 Ensembl1910,652,939 - 10,706,762 (-)Ensembl
Vero_WHO_p1.0NW_023666045115,411,325 - 115,467,616 (+)NCBI
Mn1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247474,090,664 - 4,135,822 (-)NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium 2
Low 3 3 3 13 2 1 1
Below cutoff 7 1 1 2 6 1 1

Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000010922   ⟹   ENSSSCP00000010637
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1445,096,485 - 45,140,570 (-)Ensembl
RefSeq Acc Id: XM_021072488   ⟹   XP_020928147
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11445,093,660 - 45,142,476 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_020928147 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_020928147   ⟸   XM_021072488
- Sequence:
RefSeq Acc Id: ENSSSCP00000010637   ⟸   ENSSSCT00000010922


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000009966 Ensembl, UniProtKB/TrEMBL
Ensembl Protein ENSSSCP00000010637 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000010922 UniProtKB/TrEMBL
InterPro MN1 UniProtKB/TrEMBL
NCBI Gene MN1 ENTREZGENE
PANTHER PTHR15821 UniProtKB/TrEMBL
UniProt F1RG68_PIG UniProtKB/TrEMBL
VGNC ID VGNC:90285 ENTREZGENE