AUNIP (aurora kinase A and ninein interacting protein) - Rat Genome Database

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Gene: AUNIP (aurora kinase A and ninein interacting protein) Sus scrofa
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Symbol: AUNIP
Name: aurora kinase A and ninein interacting protein
RGD ID: 14011264
Description: ENCODES a protein that exhibits damaged DNA binding (inferred); INVOLVED IN double-strand break repair via homologous recombination (inferred); negative regulation of double-strand break repair via nonhomologous end joining (inferred); spindle organization (inferred); ASSOCIATED WITH autosomal recessive hypercholesterolemia (ortholog); genetic disease (ortholog); retinitis pigmentosa 59 (ortholog); FOUND IN centrosome (inferred); site of DNA damage (inferred); spindle pole (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: aurora kinase A and ninein-interacting protein
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl683,272,788 - 83,316,418 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1683,276,977 - 83,316,642 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2676,834,010 - 76,872,388 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
centrosome  (IBA,IEA)
site of DNA damage  (IEA)
spindle pole  (IBA,IEA)

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
AUNIP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl683,272,788 - 83,316,418 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1683,276,977 - 83,316,642 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2676,834,010 - 76,872,388 (-)NCBISscrofa10.2Sscrofa10.2susScr3
AUNIP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38125,831,906 - 25,859,457 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl125,831,913 - 25,859,458 (-)EnsemblGRCh38hg38GRCh38
GRCh37126,158,397 - 26,185,948 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36126,033,084 - 26,058,435 (-)NCBINCBI36Build 36hg18NCBI36
Celera124,556,593 - 24,581,939 (-)NCBICelera
Cytogenetic Map1p36.11NCBI
HuRef124,416,431 - 24,441,778 (-)NCBIHuRef
CHM1_1126,273,766 - 26,299,115 (-)NCBICHM1_1
T2T-CHM13v2.0125,669,339 - 25,696,890 (-)NCBIT2T-CHM13v2.0
Aunip
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394134,238,310 - 134,251,233 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4134,238,310 - 134,251,238 (+)EnsemblGRCm39 Ensembl
GRCm384134,510,999 - 134,523,922 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4134,510,999 - 134,523,927 (+)EnsemblGRCm38mm10GRCm38
MGSCv374134,066,914 - 134,079,837 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364133,783,075 - 133,795,998 (+)NCBIMGSCv36mm8
Celera4132,704,383 - 132,706,845 (+)NCBICelera
Cytogenetic Map4D2.3- D3NCBI
cM Map466.82NCBI
Aunip
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85152,006,021 - 152,018,614 (+)NCBIGRCr8
mRatBN7.25146,722,329 - 146,734,924 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5146,722,337 - 146,736,501 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5149,424,297 - 149,436,863 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05151,194,467 - 151,207,061 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05151,180,540 - 151,193,107 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05152,721,799 - 152,734,577 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5152,721,940 - 152,734,572 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05156,507,397 - 156,520,175 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45153,267,331 - 153,280,190 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera5145,137,245 - 145,149,834 (+)NCBICelera
Cytogenetic Map5q36NCBI
Aunip
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554525,325,426 - 5,336,833 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554525,323,345 - 5,336,589 (-)NCBIChiLan1.0ChiLan1.0
AUNIP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21201,014,645 - 201,042,028 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11200,112,601 - 200,139,944 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0125,090,690 - 25,118,062 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1126,158,124 - 26,185,578 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl126,157,953 - 26,185,578 (-)Ensemblpanpan1.1panPan2
AUNIP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1274,097,435 - 74,116,824 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl274,097,508 - 74,118,085 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha270,672,437 - 70,691,825 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0274,659,379 - 74,678,769 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1271,482,989 - 71,502,360 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0272,489,873 - 72,509,251 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0273,493,750 - 73,513,141 (+)NCBIUU_Cfam_GSD_1.0
Aunip
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505844,584,681 - 44,605,399 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647410,409,022 - 10,430,187 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647410,409,463 - 10,430,158 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AUNIP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120106,912,338 - 106,936,183 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl20106,912,431 - 106,939,583 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660339,480,686 - 9,504,516 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Aunip
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247649,920,935 - 9,948,850 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247649,920,772 - 9,950,133 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in AUNIP
1084 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium
Low 8 2 3 5 2 23 2 1 3
Below cutoff 2 2 2

Sequence


RefSeq Acc Id: ENSSSCT00000003946   ⟹   ENSSSCP00000003855
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl683,272,788 - 83,316,418 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000070449   ⟹   ENSSSCP00000071846
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl683,275,717 - 83,316,418 (-)Ensembl
RefSeq Acc Id: XM_013999063   ⟹   XP_013854517
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1683,276,977 - 83,316,642 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013854517 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000003855
  ENSSSCP00000003855.3
  ENSSSCP00000071846.1
  ENSSSCP00025010047.1
  ENSSSCP00030030834.1
  ENSSSCP00035045224.1
  ENSSSCP00070044630.1
RefSeq Acc Id: XP_013854517   ⟸   XM_013999063
- UniProtKB: A0A4X1VTW7 (UniProtKB/TrEMBL),   A0A5G2R431 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000071846   ⟸   ENSSSCT00000070449
RefSeq Acc Id: ENSSSCP00000003855   ⟸   ENSSSCT00000003946


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000003552 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00025017631 UniProtKB/TrEMBL
  ENSSSCG00030048206 UniProtKB/TrEMBL
  ENSSSCG00035077359 UniProtKB/TrEMBL
  ENSSSCG00070026291 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000003946 ENTREZGENE
  ENSSSCT00000003946.5 UniProtKB/TrEMBL
  ENSSSCT00000070449.2 UniProtKB/TrEMBL
  ENSSSCT00025023869.1 UniProtKB/TrEMBL
  ENSSSCT00030067319.1 UniProtKB/TrEMBL
  ENSSSCT00035105338.1 UniProtKB/TrEMBL
  ENSSSCT00070052705.1 UniProtKB/TrEMBL
InterPro AUNIP UniProtKB/TrEMBL
NCBI Gene AUNIP ENTREZGENE
PANTHER AURORA KINASE A AND NINEIN-INTERACTING PROTEIN UniProtKB/TrEMBL
  PTHR14526 UniProtKB/TrEMBL
Pfam AIB UniProtKB/TrEMBL
UniProt A0A4X1VTW7 ENTREZGENE, UniProtKB/TrEMBL
  A0A5G2R431 ENTREZGENE, UniProtKB/TrEMBL
  F1STT7_PIG UniProtKB/TrEMBL
VGNC ID VGNC:85695 ENTREZGENE