AUNIP (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 6 | 83,272,788 - 83,316,418 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 6 | 83,276,977 - 83,316,642 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 6 | 76,834,010 - 76,872,388 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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AUNIP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 1 | 25,831,906 - 25,859,457 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 25,831,913 - 25,859,458 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 26,158,397 - 26,185,948 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 26,033,084 - 26,058,435 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 1 | 24,556,593 - 24,581,939 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | p36.11 | NCBI | | | | | HuRef | 1 | 24,416,431 - 24,441,778 (-) | NCBI | | HuRef | | | CHM1_1 | 1 | 26,273,766 - 26,299,115 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 25,669,339 - 25,696,890 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Aunip (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 4 | 134,238,310 - 134,251,233 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 4 | 134,238,310 - 134,251,238 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 4 | 134,510,999 - 134,523,922 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 4 | 134,510,999 - 134,523,927 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 4 | 134,066,914 - 134,079,837 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 4 | 133,783,075 - 133,795,998 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 4 | 132,704,383 - 132,706,845 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | D2.3- D3 | NCBI | | | | | cM Map | 4 | 66.82 | NCBI | | | | |
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Aunip (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 5 | 152,006,021 - 152,018,614 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 5 | 146,722,329 - 146,734,924 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 5 | 146,722,337 - 146,736,501 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 5 | 149,424,297 - 149,436,863 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 5 | 151,194,467 - 151,207,061 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 5 | 151,180,540 - 151,193,107 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 5 | 152,721,799 - 152,734,577 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 5 | 152,721,940 - 152,734,572 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 5 | 156,507,397 - 156,520,175 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 5 | 153,267,331 - 153,280,190 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 5 | 145,137,245 - 145,149,834 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | q36 | NCBI | | | | |
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Aunip (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955452 | 5,325,426 - 5,336,833 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955452 | 5,323,345 - 5,336,589 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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AUNIP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 1 | 201,014,645 - 201,042,028 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 200,112,601 - 200,139,944 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 25,090,690 - 25,118,062 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 26,158,124 - 26,185,578 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 26,157,953 - 26,185,578 (-) | Ensembl | panpan1.1 | | panPan2 | |
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AUNIP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 2 | 74,097,435 - 74,116,824 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 2 | 74,097,508 - 74,118,085 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 2 | 70,672,437 - 70,691,825 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 2 | 74,659,379 - 74,678,769 (+) | NCBI | | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | 2 | 71,482,989 - 71,502,360 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 2 | 72,489,873 - 72,509,251 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 2 | 73,493,750 - 73,513,141 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Aunip (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405058 | 44,584,681 - 44,605,399 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936474 | 10,409,022 - 10,430,187 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936474 | 10,409,463 - 10,430,158 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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AUNIP (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 20 | 106,912,338 - 106,936,183 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 20 | 106,912,431 - 106,939,583 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666033 | 9,480,686 - 9,504,516 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Aunip (Heterocephalus glaber - naked mole-rat) |
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