HAUS8 (HAUS augmin like complex subunit 8)

Gene: HAUS8 (HAUS augmin like complex subunit 8) Sus scrofa

Analyze

Symbol:

HAUS8

Name:

HAUS augmin like complex subunit 8

RGD ID:

14007018

Description:

ENCODES a protein that exhibits microtubule binding (inferred); INVOLVED IN centrosome cycle (inferred); spindle assembly (inferred); ASSOCIATED WITH genetic disease (ortholog); FOUND IN HAUS complex (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

HAUS augmin-like complex subunit 8

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	60,567,581 - 60,593,375 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	60,567,575 - 60,593,378 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	59,946,802 - 59,972,728 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

centrosome cycle (IBA,IEA)

spindle assembly (IBA,IEA)

Cellular Component

centrosome (IBA,IEA)

cytoplasm (IBA,IEA)

HAUS complex (IEA,ISO)

mitotic spindle microtubule (IEA)

nuclear microtubule (IBA,IEA)

Molecular Function

microtubule binding (IBA,IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:14681463

Genomics

Comparative Map Data

HAUS8
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	60,567,581 - 60,593,375 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	60,567,575 - 60,593,378 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	59,946,802 - 59,972,728 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

HAUS8
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	17,049,729 - 17,075,533 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	17,049,729 - 17,075,625 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	17,160,539 - 17,186,343 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	17,021,571 - 17,047,343 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	19	17,062,089 - 17,087,860 (-)	NCBI		Celera
Cytogenetic Map	19	p13.11	NCBI
HuRef	19	16,729,030 - 16,754,566 (-)	NCBI		HuRef
CHM1_1	19	17,160,304 - 17,185,922 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	17,184,651 - 17,210,456 (-)	NCBI		T2T-CHM13v2.0

Haus8
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	71,703,241 - 71,725,234 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	71,701,205 - 71,725,578 (-)	Ensembl		GRCm39 Ensembl
GRCm38	8	71,250,597 - 71,272,627 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	71,248,561 - 71,272,934 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	73,775,023 - 73,796,489 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	74,180,114 - 74,201,365 (-)	NCBI		MGSCv36	mm8
Celera	8	73,774,426 - 73,795,873 (-)	NCBI		Celera
Cytogenetic Map	8	B3.3	NCBI
cM Map	8	34.43	NCBI

Haus8
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	17,964,813 - 17,979,313 (-)	NCBI		GRCr8
mRatBN7.2	16	17,930,819 - 17,945,254 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	17,930,820 - 17,945,237 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	17,982,171 - 17,996,547 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	19,115,027 - 19,129,457 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	18,035,096 - 18,049,468 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	19,654,785 - 19,669,221 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	19,654,798 - 19,669,196 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	19,512,404 - 19,529,320 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	18,418,561 - 18,434,014 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	16	18,418,577 - 18,434,001 (-)	NCBI
Celera	16	18,138,535 - 18,152,913 (-)	NCBI		Celera
Cytogenetic Map	16	p14	NCBI

Haus8
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955524	1,042,643 - 1,042,951 (+)	NCBI	ChiLan1.0	ChiLan1.0

HAUS8
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	21,919,708 - 21,945,592 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	20,926,373 - 20,952,251 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	16,537,004 - 16,562,860 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	17,511,043 - 17,536,897 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	17,511,043 - 17,536,897 (-)	Ensembl	panpan1.1		panPan2

HAUS8
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	45,600,120 - 45,622,569 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	45,600,135 - 45,622,566 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	45,513,373 - 45,535,847 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	46,086,272 - 46,108,746 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	46,086,297 - 46,108,743 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	45,322,850 - 45,345,314 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	45,732,695 - 45,755,149 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	46,008,730 - 46,031,203 (+)	NCBI		UU_Cfam_GSD_1.0

Haus8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	204,165,700 - 204,187,053 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936596	3,714,851 - 3,735,046 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

HAUS8
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	15,545,415 - 15,571,144 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	15,544,900 - 15,571,115 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666074	3,862,769 - 3,888,506 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Haus8
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624908	752,005 - 760,786 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in HAUS8
540 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	hemolymphoid system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system
High
Medium
Low	9	4	3	5	1	23	2	3	3
Below cutoff	1				1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021083576	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK234243	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01095698	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSSCT00000053368 ⟹ ENSSSCP00000044319

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	60,567,581 - 60,593,375 (+)	Ensembl

RefSeq Acc Id:

XM_021083576 ⟹ XP_020939235

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	60,567,575 - 60,593,378 (+)	NCBI

Sequence:

show sequence

ACTTCCGACCCGGCCCCTGCCACCGGCCCATGCCACCGCCCCCTGCCACTGGTGGGCGAAACCA
AGTGTGAGGGGAAGGCAGAGAGGCGCACGCGGAGGAGTCGCCCGCTCTGCCTACAGCCACACTC
ATCACGGCCCGCGGCAACCCCTCCTGAGGCGTCTCAATGTGGCCTGGTCGAGGTGGGGGCGGGG
GCGCGGGCGCGGACTTGAAGAGCAGGCCTTTGAGTTGAAGGCGGGAAAATGGCGGATACCTCGG
GGCGTGGCGCTGGGAAGCCTTCCTCAGGGGGTCCCAGTACTCCTAGTGGTGCTAAGACGAGAGG
GAGAAGAACACAAGGTGGAAGAGTGGTGGAGTCCCGGTACTTGCAATATGAGAAGGAAGCCACC
AAAAAGGCTCCTGCAGCAGATACGTTAAAGAACAGTGGGAAGATGCCTGAAGGTGGAAGAAAAC
CCAGCCTCCTCCAGAAGAGCAAAGATAGCAGTGGAATTGGCAAGGGTGACCTGCAGTCCACCTT
GCTGGAAGGGCATGGCACTGCCCCGCCTGACCTGGATCTCTCGGCCATTAATGACAAAAGTATG
GTTCGAAAGACTCCACAATTAGAAAAAACGATGTTACAGAAAACTGAGTCTTCATCATTTTCTG
CCTTGAAGAAAAAGAGCCCAGATCTTTCCCAAGCGATGGAAATGGTGGAATCCCAGACACTGCT
CCTGAGTCTACTGGCCTTGAAGATGGAGAATGGTCTTGCAGCATTCGAAGAAAAGGCAGAGAAG
AATCTATTACTAATGTGCAAAGAGAAGGAGAAGCTACAGAAAAAGACCCATGAGCTGAAGCGCA
AACTTCTCCTCTGTCAGAGGAAGCGGGAGCTGACGGATGTCCTAGACGCTCAGATCGAGATGCT
CAGCCCCTTTGAGGCCGTGGCCAGCCGCTTCAAGGAGCAGTACAAGACGTTTGCCACTGCCCTG
GACACGACGAGGCACGAACTGCCCATGAGATCGATCCACCTGAAAGATGGAGACGGGCAGCGGC
TCTTGGATGAATTGCAGCCAGAATTGATGACCACGCGCCATCTGCTGGGAGAACTTGGCATCGG
CAGCTCAGAGGAAAACATGAAGGCTTTGGACCTGCTGAACGAACTCAAGGAAGTGACCCAGATG
AAGGATCTGGAGCTCCGAAGGAGCTTTGCCCAGGTTCTGGAACTCTCCGCCCAGGCAAGTAAAG
AAGCAGCCTTAATCAACCAGGAGGTCTGGGAAGAGGCCCAGGGCTCCAAGGCCTCCAGCCAGTG
GTATTTCAATCCCGAAGAGGCCACTGGTGGGGAAACTCGGGGTGAGCCTGGGAGCCTCCTCCTC
CCGGGCCACGATGAGCTGTGAATCTACCTGCAAGCCAGGTCTCCCTGGGAATGGGTGGTGGGGG
GAGCCCATGCTCTGCCTCCTGTGGGGGTGGGGGTGGGGAACCTGCAGTGACCCACGTGTAATAT
TCTGGAAACTTAAGCACTTTATGTACTTAGTCTAGTTGTATAGCTGTTTTTGTATGATAATCTC
TTTTGCTATTTAACAAAACAGTTTTGCAATTGAACCTTGGTAATTTAACAAATAAAACTATTCT
GCAGTTGAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_020939235	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000044319
	ENSSSCP00000044319.1
	ENSSSCP00015034600.1
	ENSSSCP00030027677.1
	ENSSSCP00030027701.1
	ENSSSCP00035014765.1
	ENSSSCP00035014768.1
	ENSSSCP00045043593.1
	ENSSSCP00050037570.1
	ENSSSCP00055030043.1
	ENSSSCP00060021130.1
	ENSSSCP00065002242.1
	ENSSSCP00070032818.1

RefSeq Acc Id:

XP_020939235 ⟸ XM_021083576

- UniProtKB:

A0A287AK92 (UniProtKB/TrEMBL), A0A4X1UVQ6 (UniProtKB/TrEMBL), A0A480UTQ0 (UniProtKB/TrEMBL), A0A8D0WXM5 (UniProtKB/TrEMBL), A0A8D1VAS7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MADTSGRGAGKPSSGGPSTPSGAKTRGRRTQGGRVVESRYLQYEKEATKKAPAADTLKNSGKMP
EGGRKPSLLQKSKDSSGIGKGDLQSTLLEGHGTAPPDLDLSAINDKSMVRKTPQLEKTMLQKTE
SSSFSALKKKSPDLSQAMEMVESQTLLLSLLALKMENGLAAFEEKAEKNLLLMCKEKEKLQKKT
HELKRKLLLCQRKRELTDVLDAQIEMLSPFEAVASRFKEQYKTFATALDTTRHELPMRSIHLKD
GDGQRLLDELQPELMTTRHLLGELGIGSSEENMKALDLLNELKEVTQMKDLELRRSFAQVLELS
AQASKEAALINQEVWEEAQGSKASSQWYFNPEEATGGETRGEPGSLLLPGHDEL

hide sequence

RefSeq Acc Id:

ENSSSCP00000044319 ⟸ ENSSSCT00000053368

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000036584	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015063684	UniProtKB/TrEMBL
	ENSSSCG00030043348	UniProtKB/TrEMBL
	ENSSSCG00035027988	UniProtKB/TrEMBL
	ENSSSCG00045036091	UniProtKB/TrEMBL
	ENSSSCG00050064319	UniProtKB/TrEMBL
	ENSSSCG00055019322	UniProtKB/TrEMBL
	ENSSSCG00060036432	UniProtKB/TrEMBL
	ENSSSCG00065003788	UniProtKB/TrEMBL
	ENSSSCG00070019789	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000053368	ENTREZGENE
	ENSSSCT00000053368.3	UniProtKB/TrEMBL
	ENSSSCT00015085165.1	UniProtKB/TrEMBL
	ENSSSCT00030060427.1	UniProtKB/TrEMBL
	ENSSSCT00030060479.1	UniProtKB/TrEMBL
	ENSSSCT00035037027.1	UniProtKB/TrEMBL
	ENSSSCT00035037030.1	UniProtKB/TrEMBL
	ENSSSCT00045061981.1	UniProtKB/TrEMBL
	ENSSSCT00050087582.1	UniProtKB/TrEMBL
	ENSSSCT00055037800.1	UniProtKB/TrEMBL
	ENSSSCT00060049360.1	UniProtKB/TrEMBL
	ENSSSCT00065005163.1	UniProtKB/TrEMBL
	ENSSSCT00070039190.1	UniProtKB/TrEMBL
NCBI Gene	HAUS8	ENTREZGENE
PANTHER	AUGMIN FAMILY MEMBER	UniProtKB/TrEMBL
	HAUS AUGMIN-LIKE COMPLEX SUBUNIT 8	UniProtKB/TrEMBL
UniProt	A0A287AK92	ENTREZGENE, UniProtKB/TrEMBL
	A0A480UTQ0	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1UVQ6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0WXM5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0WXP5_PIG	UniProtKB/TrEMBL
	A0A8D1R2R5_PIG	UniProtKB/TrEMBL
	A0A8D1VAS7	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:88790	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar