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Gene: STING1 (stimulator of interferon response cGAMP interactor 1) Sus scrofa

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Symbol:

STING1

Name:

stimulator of interferon response cGAMP interactor 1

RGD ID:

13984414

Description:

ENCODES a protein that exhibits 2',3'-cyclic GMP-AMP binding (ortholog); cyclic-di-GMP binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN activation of innate immune response (ortholog); autophagosome assembly (ortholog); cGAS/STING signaling pathway (ortholog); ASSOCIATED WITH Animal Toxoplasmosis (ortholog); brucellosis (ortholog); Chediak-Higashi syndrome (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog); INTERACTS WITH deoxynivalenol

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

stimulator of interferon genes protein; STING; TMEM173; transmembrane protein 173

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	141,358,993 - 141,367,198 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	2	141,359,402 - 141,367,222 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	147,169,469 - 147,177,263 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Animal Toxoplasmosis (ISO)

brucellosis (ISO)

Chediak-Higashi syndrome (ISO)

Chemical and Drug Induced Liver Injury (ISO)

Chilblain Lupus 1 (ISO)

Chronic Hepatitis B (ISO)

chronic obstructive pulmonary disease (ISO)

Cytomegalovirus Infections (ISO)

esophagus squamous cell carcinoma (ISO)

genetic disease (ISO)

Haemophilus Infections (ISO)

hepatitis B (ISO)

human immunodeficiency virus infectious disease (ISO)

listeriosis (ISO)

lymphadenitis (ISO)

Pneumococcal Pneumonia (ISO)

schistosomiasis (ISO)

Silicotuberculosis (ISO)

STING-associated vasculopathy with onset in infancy (ISO)

tuberculosis (ISO)

West Nile encephalitis (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

deoxynivalenol (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

activation of innate immune response (IBA,IEA,ISS)

antiviral innate immune response (IEA)

autophagosome assembly (IBA,IEA,ISS)

autophagy (IEA)

cellular response to exogenous dsRNA (IEA)

cellular response to interferon-beta (IEA)

cGAS/STING signaling pathway (IEA,ISS)

cytoplasmic pattern recognition receptor signaling pathway (IEA)

defense response to virus (IBA,IEA,ISO,ISS)

immune system process (IEA)

innate immune response (IBA,IEA,ISS)

monoatomic ion transmembrane transport (IEA)

monoatomic ion transport (IEA)

pattern recognition receptor signaling pathway (IEA)

positive regulation of cGAS/STING signaling pathway (IEA)

positive regulation of defense response to virus by host (IEA)

positive regulation of interferon-beta production (IEA,ISS)

positive regulation of macroautophagy (IBA,IEA,ISS)

positive regulation of transcription by RNA polymerase II (IEA)

positive regulation of type I interferon production (IBA,IEA,ISS)

positive regulation of type I interferon-mediated signaling pathway (IEA)

protein complex oligomerization (IEA,ISO)

protein exit from endoplasmic reticulum (IEA)

protein localization to endoplasmic reticulum (IEA,ISO)

proton transmembrane transport (IEA)

regulation of gene expression (IEA)

regulation of inflammatory response (IEA)

reticulophagy (IBA,IEA,ISS)

Cellular Component

autophagosome (IBA,IEA)

autophagosome membrane (IEA)

ciliary basal body (IEA)

cilium (IEA)

cytoplasm (IEA,ISS)

cytoplasmic vesicle (IEA)

cytosol (IEA)

endoplasmic reticulum (IEA)

endoplasmic reticulum membrane (IBA,IEA,ISS)

endoplasmic reticulum-Golgi intermediate compartment membrane (IEA)

endosome (IEA)

Golgi apparatus (IEA,ISO)

Golgi membrane (IEA,ISO)

mitochondrial outer membrane (IEA)

nucleoplasm (IEA)

perinuclear region of cytoplasm (IEA,ISS)

peroxisome (IEA)

plasma membrane (IEA)

STING complex (IEA)

Molecular Function

2',3'-cyclic GMP-AMP binding (IBA,IEA,ISS)

cyclic-di-GMP binding (IBA,IEA,ISS)

identical protein binding (IEA)

nucleotide binding (IEA)

protein binding (ISO)

protein homodimerization activity (IEA,ISS)

protein kinase binding (IEA)

protein serine/threonine kinase binding (IEA)

proton channel activity (IEA,ISS)

RNA polymerase II-specific DNA-binding transcription factor binding (IEA)

signaling adaptor activity (IEA,ISS)

transcription coactivator activity (IEA)

ubiquitin protein ligase binding (IEA)

References

Additional References at PubMed

PMID:14681463	PMID:20346968	PMID:22301074	PMID:22312267	PMID:30032202

Genomics

Comparative Map Data

STING1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	141,358,993 - 141,367,198 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	2	141,359,402 - 141,367,222 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	147,169,469 - 147,177,263 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

STING1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	5	139,475,533 - 139,482,758 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	5	139,475,528 - 139,482,935 (-)	Ensembl			hg38	GRCh38
GRCh37	5	138,855,118 - 138,862,343 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	5	138,835,733 - 138,842,476 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	5	134,930,158 - 134,937,391 (-)	NCBI		Celera
Cytogenetic Map	5	q31.2	NCBI
HuRef	5	133,997,951 - 134,005,182 (-)	NCBI		HuRef
CHM1_1	5	138,287,678 - 138,294,915 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	5	140,000,594 - 140,007,823 (-)	NCBI		T2T-CHM13v2.0

Sting1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	18	35,866,731 - 35,873,607 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	18	35,866,732 - 35,873,607 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	18	35,733,678 - 35,740,554 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	18	35,733,679 - 35,740,554 (-)	Ensembl			mm10	GRCm38
MGSCv37	18	35,893,332 - 35,900,208 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	18	35,859,652 - 35,866,528 (-)	NCBI		MGSCv36	mm8
Celera	18	36,189,779 - 36,196,655 (-)	NCBI		Celera
Cytogenetic Map	18	B2	NCBI
cM Map	18	19.23	NCBI

Sting1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	18	27,606,196 - 27,612,544 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	18	27,606,196 - 27,611,947 (-)	Ensembl				GRCr8
mRatBN7.2	18	27,332,119 - 27,338,371 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	18	27,332,119 - 27,338,335 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	18	27,459,541 - 27,465,793 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	18	28,221,584 - 28,227,830 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	18	27,556,463 - 27,562,709 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	18	28,529,537 - 28,535,828 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	18	28,529,576 - 28,535,828 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	18	28,242,119 - 28,248,371 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	18	28,355,029 - 28,357,171 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	18	27,065,352 - 27,071,596 (-)	NCBI		Celera
Cytogenetic Map	18	p11	NCBI

Sting1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955418	1,083,613 - 1,100,448 (+)	Ensembl
ChiLan1.0	NW_004955418	1,091,022 - 1,097,064 (+)	NCBI	ChiLan1.0	ChiLan1.0

STING1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	4	134,741,514 - 134,750,786 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	5	132,881,061 - 132,890,364 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	5	134,845,689 - 134,852,938 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	5	140,967,399 - 140,989,653 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	5	140,967,399 - 140,973,846 (-)	Ensembl			panPan2	panpan1.1

STING1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	34,783,947 - 34,792,204 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	34,784,232 - 34,789,072 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	31,886,015 - 31,894,282 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	35,237,857 - 35,246,124 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	35,217,688 - 35,243,000 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	32,290,300 - 32,298,567 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	33,156,814 - 33,165,081 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	33,908,726 - 33,916,993 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Sting1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	153,048,662 - 153,055,631 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936531	8,555,637 - 8,562,885 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936531	8,555,966 - 8,562,829 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

STING1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	23	42,153,576 - 42,160,903 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	23	42,153,026 - 42,160,907 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666034	35,727,193 - 35,734,956 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Sting1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624743	32,273,385 - 32,283,235 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624743	32,277,197 - 32,283,346 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Sting1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	15	8,632,773 - 8,639,865 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in STING1
314 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001142838	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005661703	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005661704	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013995167	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013995168	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013995169	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013995170	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013995171	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021077058	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK236607	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK396045	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FJ455509	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FP102079	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01113504	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JN226147	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KC860780	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000015677 ⟹ ENSSSCP00000015264

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	141,359,405 - 141,367,198 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000036520 ⟹ ENSSSCP00000028503

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	141,359,790 - 141,367,198 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000088164 ⟹ ENSSSCP00000070997

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	2	141,358,993 - 141,365,565 (-)	Ensembl

RefSeq Acc Id:

NM_001142838 ⟹ NP_001136310

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	141,359,689 - 141,365,563 (-)	NCBI

Sequence:

show sequence

ATGCCCTACTCCAGCCTGCATCCATCCATCCCACAGCCCAGGGGCCTCAGGGCTCAGGTGGCAG
CCTTGGTCCTTCTAGGTGCCTGCTTGGTGGCCCTTTGGGGGCTGGGGGAGCTGCCAGAATACAC
GCTCCGGTGGCTGGTGCTCCACCTGGCCTCCCAGCAGATAGGACTGCTGGTGAAGGGGCTCTGC
AGTCTGGCGGAGGAGCTGTGCCACGTCCACTCCAGGTACCAGAGCAGCTACTGGAGGGCTGCGC
GGGCCTGCCTGGGCTGCCCCATCCGCTGTGGAGCCCTGCTGCTGCTGTCCTGCTACTTCTACTT
CTCCATCCGAGACAAGGCTGGCCTGCCCCTCCCCTGGATGCTGGCCCTCCTGGGCCTCTCGCAG
GCCCTAAACATCCTCCTGGGCCTCCAGCACCTGGCCCCAGCTGAAGTCTCTGCAATCTGTGAAA
AAAGGAACTTCAACGTGGCTCATGGACTGGCCTGGTCTTATTACATCGGGTACCTGCGGCTGAT
CCTCCCAGGGCTCCGGGCTCGGATCCAAGCTTATAATCAGCGCCACAAGAACGTACTCGGGGGC
ATAGGGAACCACCGGCTGCACATCCTCTTCCCGTTGGACTGTGGGGTGCCCGATGACCTGAGCG
TGGCTGACCCCAACATTCGCTTCCTGCACGAGCTGCCCCAGCAAAGTGCCGACCGTGCTGGCAT
CAAGGGCCGGGTGTACACCAACAGCATCTATGAGCTTCTGGAGAACGGGCAGCCGGCAGGCGTC
TGTGTCCTGGGGTACGCCACTCCCTTGCAGACCTTGTTCGCCATGTCACAGGATGGCCGCGCTG
GCTTCAGCCGGGAGGATCGGCTCGAGCAGGCCAAACTCTTCTGCCGGACCCTCGAAGACATCCT
GGCAGATGCGCCTGAGGCTCAGAACAACTGCCGCCTCATTGTCTACCAGGAACCCACAGAGGGA
GGCAGCTTCTCCCTGTCGCAGGAGATTCTCCGGCACCTTCGGCAGGAGGAAAGGGAGGTTACCA
TGGGCAGTGCGGAGACCTCAGTGGTGCCCACTTCCTCCACGCTGTCCCAAGAGCCTGAGCTCCT
CATCAGTGGCATGGAACAGCCTCTTCCACTCCGCTCAGATATCTTCTGA

hide sequence

RefSeq Acc Id:

XM_005661703 ⟹ XP_005661760

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	141,359,402 - 141,367,222 (-)	NCBI

Sequence:

show sequence

TCCCCACTTCCTCCTCTGTTAGCCACGATGGGAGTGGGGCAAGTCAGTTCACCTCACTGTGGAA
AGTTCTGTAGCTTCCTGACAGGGTGGCTGCACAGATTAAATGAAAACATGAGCAATTCTCGGCA
TAATGTCTGAAGCATGGAAATCACGGTTCATTTCCCCACCTCCAGCCTGATTGCCCCGGCTTCA
GAGAAAGAGGATCTGCTTCTGGAAATTGGAATGAAACCACTCAGGCAGGGCAGCGTCCTGAAAG
GCCCCGTGGGGCTGGGAGCCCTTGGACAGGACCTTCTCCCCTTGCCGTCTTCCAGAAACAACCT
GCGGTCTGGGAGGCAGAAGATGCCCTACTCCAGCCTGCATCCATCCATCCCACAGCCCAGGGGC
CTCAGGGCTCAGGTGGCAGCCTTGGTCCTTCTAGGTGCCTGCTTGGTGGCCCTTTGGGGGCTGG
GGGAGCTGCCAGAATACACGCTCCGGTGGCTGGTGCTCCACCTGGCCTCCCAGCAGATAGGACT
GCTGGTGAAGGGGCTCTGCAGTCTGGCGGAGGAGCTGTGCCACGTCCACTCCAGGTACCAGAGC
AGCTACTGGAGGGCTGCGCGGGCCTGCCTGGGCTGCCCCATCCGCTGTGGAGCCCTGCTGCTGC
TGTCCTGCTACTTCTACTTCTCCATCCGAGACAAGGCTGGCCTGCCCCTCCCCTGGATGCTGGC
CCTCCTGGGCCTCTCGCAGGCCCTAAACATCCTCCTGGGCCTCCAGCACCTGGCCCCAGCTGAA
GTCTCTGCAATCTGTGAAAAAAGGAACTTCAACGTGGCTCATGGACTGGCCTGGTCTTATTACA
TCGGGTACCTGCGGCTGATCCTCCCAGGGCTCCGGGCTCGGATCCAAGCTTATAATCAGCGCCA
CAAGAACGTACTCGGGGGCATAGGGAACCACCGGCTGCACATCCTCTTCCCGTTGGACTGTGGG
GTGCCCGATGACCTGAGCGTGGCTGACCCCAACATTCGCTTCCTGCACGAGCTGCCCCAGCAAA
GTGCCGACCGTGCTGGCATCAAGGGCCGGGTGTACACCAACAGCATCTATGAGCTTCTGGAGAA
CGGGCAGCCGGCAGGCGTCTGTGTCCTGGAGTACGCCACTCCCTTGCAGACCTTGTTCGCCATG
TCACAGGATGGCCGCGCTGGCTTCAGCCGGGAGGATCGGCTCGAGCAGGCCAAACTCTTCTGCC
GGACCCTCGAAGACATCCTGGCAGTTGCGCCTGAGGCTCAGAACAACTGCCGCCTCATTGTCTA
CCAGGAACCCACAGAGGGAGGCAGCTTCTCCCTGTCGCAGGAGATTCTCCGGCACCTTCGGCAG
GAGGAAAGGGAGGTTACCATGGGCAGTGCGGAGACCTCAGTGGTGCCCACTTCCTCCACGCTGT
CCCAAGAGCCTGAGCTCCTCATCAGTGGCATGGAACAGCCTCTTCCACTCCGCTCAGATATCTT
CTGAGGCCCGGGGTCCCCTTGCCTGAGCCCCCGGCCATCGCCAAGAGTCTGGATCAGGGGCTTT
CTTCAGCAGCTGAAGGCCTAGCAGAGCCGTCTCCTCTGCGGAGGGCCTTTCAGAGAAGGTCCCT
GGACTTGACAGCTCACGATGACTCCTGCGACCAGTTGTCCGGGCCTCAGTGTCGGCATCTGTGA
AATGGGATTGTAACCATCGCCCTCCCTACCTCACAGGGCTGTTGTGAGGACCTAGCCACGTGGA
AGTTTTTATAAACCCTACGTGGCAGCCCAACCTAA

hide sequence

RefSeq Acc Id:

XM_005661704 ⟹ XP_005661761

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	141,359,402 - 141,366,482 (-)	NCBI

Sequence:

show sequence

AGCGTGTGCGCTTGGCTGGCCTGAAAGGCCCCGTGGGGCTGGGAGCCCTTGGACAGGACCTTCT
CCCCTTGCCGTCTTCCAGAAACAACCTGCGGTCTGGGAGGCAGAAGATGCCCTACTCCAGCCTG
CATCCATCCATCCCACAGCCCAGGGGCCTCAGGGCTCAGGTGGCAGCCTTGGTCCTTCTAGGTG
CCTGCTTGGTGGCCCTTTGGGGGCTGGGGGAGCTGCCAGAATACACGCTCCGGTGGCTGGTGCT
CCACCTGGCCTCCCAGCAGATAGGACTGCTGGTGAAGGGGCTCTGCAGTCTGGCGGAGGAGCTG
TGCCACGTCCACTCCAGGTACCAGAGCAGCTACTGGAGGGCTGCGCGGGCCTGCCTGGGCTGCC
CCATCCGCTGTGGAGCCCTGCTGCTGCTGTCCTGCTACTTCTACTTCTCCATCCGAGACAAGGC
TGGCCTGCCCCTCCCCTGGATGCTGGCCCTCCTGGGCCTCTCGCAGGCCCTAAACATCCTCCTG
GGCCTCCAGCACCTGGCCCCAGCTGAAGTCTCTGCAATCTGTGAAAAAAGGAACTTCAACGTGG
CTCATGGACTGGCCTGGTCTTATTACATCGGGTACCTGCGGCTGATCCTCCCAGGGCTCCGGGC
TCGGATCCAAGCTTATAATCAGCGCCACAAGAACGTACTCGGGGGCATAGGGAACCACCGGCTG
CACATCCTCTTCCCGTTGGACTGTGGGGTGCCCGATGACCTGAGCGTGGCTGACCCCAACATTC
GCTTCCTGCACGAGCTGCCCCAGCAAAGTGCCGACCGTGCTGGCATCAAGGGCCGGGTGTACAC
CAACAGCATCTATGAGCTTCTGGAGAACGGGCAGCCGGCAGGCGTCTGTGTCCTGGAGTACGCC
ACTCCCTTGCAGACCTTGTTCGCCATGTCACAGGATGGCCGCGCTGGCTTCAGCCGGGAGGATC
GGCTCGAGCAGGCCAAACTCTTCTGCCGGACCCTCGAAGACATCCTGGCAGTTGCGCCTGAGGC
TCAGAACAACTGCCGCCTCATTGTCTACCAGGAACCCACAGAGGGAGGCAGCTTCTCCCTGTCG
CAGGAGATTCTCCGGCACCTTCGGCAGGAGGAAAGGGAGGTTACCATGGGCAGTGCGGAGACCT
CAGTGGTGCCCACTTCCTCCACGCTGTCCCAAGAGCCTGAGCTCCTCATCAGTGGCATGGAACA
GCCTCTTCCACTCCGCTCAGATATCTTCTGAGGCCCGGGGTCCCCTTGCCTGAGCCCCCGGCCA
TCGCCAAGAGTCTGGATCAGGGGCTTTCTTCAGCAGCTGAAGGCCTAGCAGAGCCGTCTCCTCT
GCGGAGGGCCTTTCAGAGAAGGTCCCTGGACTTGACAGCTCACGATGACTCCTGCGACCAGTTG
TCCGGGCCTCAGTGTCGGCATCTGTGAAATGGGATTGTAACCATCGCCCTCCCTACCTCACAGG
GCTGTTGTGAGGACCTAGCCACGTGGAAGTTTTTATAAACCCTACGTGGCAGCCCAACCTAA

hide sequence

RefSeq Acc Id:

XM_013995167 ⟹ XP_013850621

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	141,359,402 - 141,367,096 (-)	NCBI

Sequence:

show sequence

CATAATGTCTGAAGCATGGTTGTTGTTACAGGAAATCACGGTTCATTTCCCCACCTCCAGCCTG
ATTGCCCCGGCTTCAGAGAAAGAGGATCTGCTTCTGGAAATTGGAATGAAACCACTCAGGCAGG
GCAGCGTCCTGAAAGGCCCCGTGGGGCTGGGAGCCCTTGGACAGGACCTTCTCCCCTTGCCGTC
TTCCAGAAACAACCTGCGGTCTGGGAGGCAGAAGGTGCCTGCTTGGTGGCCCTTTGGGGGCTGG
GGGAGCTGCCAGAATACACGCTCCGGTGGCTGGTGCTCCACCTGGCCTCCCAGCAGATAGGACT
GCTGGTGAAGGGGCTCTGCAGTCTGGCGGAGGAGCTGTGCCACGTCCACTCCAGGTACCAGAGC
AGCTACTGGAGGGCTGCGCGGGCCTGCCTGGGCTGCCCCATCCGCTGTGGAGCCCTGCTGCTGC
TGTCCTGCTACTTCTACTTCTCCATCCGAGACAAGGCTGGCCTGCCCCTCCCCTGGATGCTGGC
CCTCCTGGGCCTCTCGCAGGCCCTAAACATCCTCCTGGGCCTCCAGCACCTGGCCCCAGCTGAA
GTCTCTGCAATCTGTGAAAAAAGGAACTTCAACGTGGCTCATGGACTGGCCTGGTCTTATTACA
TCGGGTACCTGCGGCTGATCCTCCCAGGGCTCCGGGCTCGGATCCAAGCTTATAATCAGCGCCA
CAAGAACGTACTCGGGGGCATAGGGAACCACCGGCTGCACATCCTCTTCCCGTTGGACTGTGGG
GTGCCCGATGACCTGAGCGTGGCTGACCCCAACATTCGCTTCCTGCACGAGCTGCCCCAGCAAA
GTGCCGACCGTGCTGGCATCAAGGGCCGGGTGTACACCAACAGCATCTATGAGCTTCTGGAGAA
CGGGCAGCCGGCAGGCGTCTGTGTCCTGGAGTACGCCACTCCCTTGCAGACCTTGTTCGCCATG
TCACAGGATGGCCGCGCTGGCTTCAGCCGGGAGGATCGGCTCGAGCAGGCCAAACTCTTCTGCC
GGACCCTCGAAGACATCCTGGCAGTTGCGCCTGAGGCTCAGAACAACTGCCGCCTCATTGTCTA
CCAGGAACCCACAGAGGGAGGCAGCTTCTCCCTGTCGCAGGAGATTCTCCGGCACCTTCGGCAG
GAGGAAAGGGAGGTTACCATGGGCAGTGCGGAGACCTCAGTGGTGCCCACTTCCTCCACGCTGT
CCCAAGAGCCTGAGCTCCTCATCAGTGGCATGGAACAGCCTCTTCCACTCCGCTCAGATATCTT
CTGAGGCCCGGGGTCCCCTTGCCTGAGCCCCCGGCCATCGCCAAGAGTCTGGATCAGGGGCTTT
CTTCAGCAGCTGAAGGCCTAGCAGAGCCGTCTCCTCTGCGGAGGGCCTTTCAGAGAAGGTCCCT
GGACTTGACAGCTCACGATGACTCCTGCGACCAGTTGTCCGGGCCTCAGTGTCGGCATCTGTGA
AATGGGATTGTAACCATCGCCCTCCCTACCTCACAGGGCTGTTGTGAGGACCTAGCCACGTGGA
AGTTTTTATAAACCCTACGTGGCAGCCCAACCTAA

hide sequence

RefSeq Acc Id:

XM_013995168 ⟹ XP_013850622

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	141,359,402 - 141,367,096 (-)	NCBI

Sequence:

show sequence

CATAATGTCTGAAGCATGGTTGTTGTTACAGGAAATCACGGTTCATTTCCCCACCTCCAGCCTG
ATTGCCCCGGCTTCAGAGAAAGAGGATCTGCTTCTGGAAATTGGAATGAAACCACTCAGCCTGA
AAGGCCCCGTGGGGCTGGGAGCCCTTGGACAGGACCTTCTCCCCTTGCCGTCTTCCAGAAACAA
CCTGCGGTCTGGGAGGCAGAAGGTGCCTGCTTGGTGGCCCTTTGGGGGCTGGGGGAGCTGCCAG
AATACACGCTCCGGTGGCTGGTGCTCCACCTGGCCTCCCAGCAGATAGGACTGCTGGTGAAGGG
GCTCTGCAGTCTGGCGGAGGAGCTGTGCCACGTCCACTCCAGGTACCAGAGCAGCTACTGGAGG
GCTGCGCGGGCCTGCCTGGGCTGCCCCATCCGCTGTGGAGCCCTGCTGCTGCTGTCCTGCTACT
TCTACTTCTCCATCCGAGACAAGGCTGGCCTGCCCCTCCCCTGGATGCTGGCCCTCCTGGGCCT
CTCGCAGGCCCTAAACATCCTCCTGGGCCTCCAGCACCTGGCCCCAGCTGAAGTCTCTGCAATC
TGTGAAAAAAGGAACTTCAACGTGGCTCATGGACTGGCCTGGTCTTATTACATCGGGTACCTGC
GGCTGATCCTCCCAGGGCTCCGGGCTCGGATCCAAGCTTATAATCAGCGCCACAAGAACGTACT
CGGGGGCATAGGGAACCACCGGCTGCACATCCTCTTCCCGTTGGACTGTGGGGTGCCCGATGAC
CTGAGCGTGGCTGACCCCAACATTCGCTTCCTGCACGAGCTGCCCCAGCAAAGTGCCGACCGTG
CTGGCATCAAGGGCCGGGTGTACACCAACAGCATCTATGAGCTTCTGGAGAACGGGCAGCCGGC
AGGCGTCTGTGTCCTGGAGTACGCCACTCCCTTGCAGACCTTGTTCGCCATGTCACAGGATGGC
CGCGCTGGCTTCAGCCGGGAGGATCGGCTCGAGCAGGCCAAACTCTTCTGCCGGACCCTCGAAG
ACATCCTGGCAGTTGCGCCTGAGGCTCAGAACAACTGCCGCCTCATTGTCTACCAGGAACCCAC
AGAGGGAGGCAGCTTCTCCCTGTCGCAGGAGATTCTCCGGCACCTTCGGCAGGAGGAAAGGGAG
GTTACCATGGGCAGTGCGGAGACCTCAGTGGTGCCCACTTCCTCCACGCTGTCCCAAGAGCCTG
AGCTCCTCATCAGTGGCATGGAACAGCCTCTTCCACTCCGCTCAGATATCTTCTGAGGCCCGGG
GTCCCCTTGCCTGAGCCCCCGGCCATCGCCAAGAGTCTGGATCAGGGGCTTTCTTCAGCAGCTG
AAGGCCTAGCAGAGCCGTCTCCTCTGCGGAGGGCCTTTCAGAGAAGGTCCCTGGACTTGACAGC
TCACGATGACTCCTGCGACCAGTTGTCCGGGCCTCAGTGTCGGCATCTGTGAAATGGGATTGTA
ACCATCGCCCTCCCTACCTCACAGGGCTGTTGTGAGGACCTAGCCACGTGGAAGTTTTTATAAA
CCCTACGTGGCAGCCCAACCTAA

hide sequence

RefSeq Acc Id:

XM_013995169 ⟹ XP_013850623

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	141,359,402 - 141,367,212 (-)	NCBI

Sequence:

show sequence

CTCCTCTGTTAGCCACGATGGGAGTGGGGCAAGTCAGTTCACCTCACTGTGGAAAGTTCTGTAG
CTTCCTGACAGGGTGGCTGCACAGATTAAATGAAAACATGAGCAATTCTCGGCATAATGTCTGA
AGCATGCCTGAAAGGCCCCGTGGGGCTGGGAGCCCTTGGACAGGACCTTCTCCCCTTGCCGTCT
TCCAGAAACAACCTGCGGTCTGGGAGGCAGAAGATGCCCTACTCCAGCCTGCATCCATCCATCC
CACAGCCCAGGGGCCTCAGGGCTCAGGTGGCAGCCTTGGTCCTTCTAGGTGCCTGCTTGGTGGC
CCTTTGGGGGCTGGGGGAGCTGCCAGAATACACGCTCCGGTGGCTGGTGCTCCACCTGGCCTCC
CAGCAGATAGGACTGCTGGTGAAGGGGCTCTGCAGTCTGGCGGAGGAGCTGTGCCACGTCCACT
CCAGGTACCAGAGCAGCTACTGGAGGGCTGCGCGGGCCTGCCTGGGCTGCCCCATCCGCTGTGG
AGCCCTGCTGCTGCTGTCCTGCTACTTCTACTTCTCCATCCGAGACAAGGCTGGCCTGCCCCTC
CCCTGGATGCTGGCCCTCCTGGGCCTCTCGCAGGCCCTAAACATCCTCCTGGGCCTCCAGCACC
TGGCCCCAGCTGAAGTCTCTGCAATCTGTGAAAAAAGGAACTTCAACGTGGCTCATGGACTGGC
CTGGTCTTATTACATCGGGTACCTGCGGCTGATCCTCCCAGGGCTCCGGGCTCGGATCCAAGCT
TATAATCAGCGCCACAAGAACGTACTCGGGGGCATAGGGAACCACCGGCTGCACATCCTCTTCC
CGTTGGACTGTGGGGTGCCCGATGACCTGAGCGTGGCTGACCCCAACATTCGCTTCCTGCACGA
GCTGCCCCAGCAAAGTGCCGACCGTGCTGGCATCAAGGGCCGGGTGTACACCAACAGCATCTAT
GAGCTTCTGGAGAACGGGCAGCCGGCAGGCGTCTGTGTCCTGGAGTACGCCACTCCCTTGCAGA
CCTTGTTCGCCATGTCACAGGATGGCCGCGCTGGCTTCAGCCGGGAGGATCGGCTCGAGCAGGC
CAAACTCTTCTGCCGGACCCTCGAAGACATCCTGGCAGTTGCGCCTGAGGCTCAGAACAACTGC
CGCCTCATTGTCTACCAGGAACCCACAGAGGGAGGCAGCTTCTCCCTGTCGCAGGAGATTCTCC
GGCACCTTCGGCAGGAGGAAAGGGAGGTTACCATGGGCAGTGCGGAGACCTCAGTGGTGCCCAC
TTCCTCCACGCTGTCCCAAGAGCCTGAGCTCCTCATCAGTGGCATGGAACAGCCTCTTCCACTC
CGCTCAGATATCTTCTGAGGCCCGGGGTCCCCTTGCCTGAGCCCCCGGCCATCGCCAAGAGTCT
GGATCAGGGGCTTTCTTCAGCAGCTGAAGGCCTAGCAGAGCCGTCTCCTCTGCGGAGGGCCTTT
CAGAGAAGGTCCCTGGACTTGACAGCTCACGATGACTCCTGCGACCAGTTGTCCGGGCCTCAGT
GTCGGCATCTGTGAAATGGGATTGTAACCATCGCCCTCCCTACCTCACAGGGCTGTTGTGAGGA
CCTAGCCACGTGGAAGTTTTTATAAACCCTACGTGGCAGCCCAACCTAA

hide sequence

RefSeq Acc Id:

XM_013995170 ⟹ XP_013850624

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	141,359,402 - 141,367,184 (-)	NCBI

Sequence:

show sequence

GCAAGTCAGTTCACCTCACTGTGGAAAGTTCTGTAGCTTCCTGACAGGGTGGCTGCACAGATTA
AATGAAAACATGAGCAATTCTCGGCATAATGTCTGAAGCATGCCTGATTGCCCCGGCTTCAGAG
AAAGAGGATCTGCTTCTGGAAATTGGAATGAAACCACTCAGCCTGAAAGGCCCCGTGGGGCTGG
GAGCCCTTGGACAGGACCTTCTCCCCTTGCCGTCTTCCAGAAACAACCTGCGGTCTGGGAGGCA
GAAGGTGCCTGCTTGGTGGCCCTTTGGGGGCTGGGGGAGCTGCCAGAATACACGCTCCGGTGGC
TGGTGCTCCACCTGGCCTCCCAGCAGATAGGACTGCTGGTGAAGGGGCTCTGCAGTCTGGCGGA
GGAGCTGTGCCACGTCCACTCCAGGTACCAGAGCAGCTACTGGAGGGCTGCGCGGGCCTGCCTG
GGCTGCCCCATCCGCTGTGGAGCCCTGCTGCTGCTGTCCTGCTACTTCTACTTCTCCATCCGAG
ACAAGGCTGGCCTGCCCCTCCCCTGGATGCTGGCCCTCCTGGGCCTCTCGCAGGCCCTAAACAT
CCTCCTGGGCCTCCAGCACCTGGCCCCAGCTGAAGTCTCTGCAATCTGTGAAAAAAGGAACTTC
AACGTGGCTCATGGACTGGCCTGGTCTTATTACATCGGGTACCTGCGGCTGATCCTCCCAGGGC
TCCGGGCTCGGATCCAAGCTTATAATCAGCGCCACAAGAACGTACTCGGGGGCATAGGGAACCA
CCGGCTGCACATCCTCTTCCCGTTGGACTGTGGGGTGCCCGATGACCTGAGCGTGGCTGACCCC
AACATTCGCTTCCTGCACGAGCTGCCCCAGCAAAGTGCCGACCGTGCTGGCATCAAGGGCCGGG
TGTACACCAACAGCATCTATGAGCTTCTGGAGAACGGGCAGCCGGCAGGCGTCTGTGTCCTGGA
GTACGCCACTCCCTTGCAGACCTTGTTCGCCATGTCACAGGATGGCCGCGCTGGCTTCAGCCGG
GAGGATCGGCTCGAGCAGGCCAAACTCTTCTGCCGGACCCTCGAAGACATCCTGGCAGTTGCGC
CTGAGGCTCAGAACAACTGCCGCCTCATTGTCTACCAGGAACCCACAGAGGGAGGCAGCTTCTC
CCTGTCGCAGGAGATTCTCCGGCACCTTCGGCAGGAGGAAAGGGAGGTTACCATGGGCAGTGCG
GAGACCTCAGTGGTGCCCACTTCCTCCACGCTGTCCCAAGAGCCTGAGCTCCTCATCAGTGGCA
TGGAACAGCCTCTTCCACTCCGCTCAGATATCTTCTGAGGCCCGGGGTCCCCTTGCCTGAGCCC
CCGGCCATCGCCAAGAGTCTGGATCAGGGGCTTTCTTCAGCAGCTGAAGGCCTAGCAGAGCCGT
CTCCTCTGCGGAGGGCCTTTCAGAGAAGGTCCCTGGACTTGACAGCTCACGATGACTCCTGCGA
CCAGTTGTCCGGGCCTCAGTGTCGGCATCTGTGAAATGGGATTGTAACCATCGCCCTCCCTACC
TCACAGGGCTGTTGTGAGGACCTAGCCACGTGGAAGTTTTTATAAACCCTACGTGGCAGCCCAA
CCTAA

hide sequence

RefSeq Acc Id:

XM_013995171 ⟹ XP_013850625

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	141,359,402 - 141,367,213 (-)	NCBI

Sequence:

show sequence

CCTCCTCTGTTAGCCACGATGGGAGTGGGGCAAGTCAGTTCACCTCACTGTGGAAAGTTCTGTA
GCTTCCTGACAGGGTGGCTGCACAGATTAAATGAAAACATGAGCAATTCTCGGCATAATGTCTG
AAGCATGCCTGAAAGGCCCCGTGGGGCTGGGAGCCCTTGGACAGGACCTTCTCCCCTTGCCGTC
TTCCAGAAACAACCTGCGGTCTGGGAGGCAGAAGGTGCCTGCTTGGTGGCCCTTTGGGGGCTGG
GGGAGCTGCCAGAATACACGCTCCGGTGGCTGGTGCTCCACCTGGCCTCCCAGCAGATAGGACT
GCTGGTGAAGGGGCTCTGCAGTCTGGCGGAGGAGCTGTGCCACGTCCACTCCAGGTACCAGAGC
AGCTACTGGAGGGCTGCGCGGGCCTGCCTGGGCTGCCCCATCCGCTGTGGAGCCCTGCTGCTGC
TGTCCTGCTACTTCTACTTCTCCATCCGAGACAAGGCTGGCCTGCCCCTCCCCTGGATGCTGGC
CCTCCTGGGCCTCTCGCAGGCCCTAAACATCCTCCTGGGCCTCCAGCACCTGGCCCCAGCTGAA
GTCTCTGCAATCTGTGAAAAAAGGAACTTCAACGTGGCTCATGGACTGGCCTGGTCTTATTACA
TCGGGTACCTGCGGCTGATCCTCCCAGGGCTCCGGGCTCGGATCCAAGCTTATAATCAGCGCCA
CAAGAACGTACTCGGGGGCATAGGGAACCACCGGCTGCACATCCTCTTCCCGTTGGACTGTGGG
GTGCCCGATGACCTGAGCGTGGCTGACCCCAACATTCGCTTCCTGCACGAGCTGCCCCAGCAAA
GTGCCGACCGTGCTGGCATCAAGGGCCGGGTGTACACCAACAGCATCTATGAGCTTCTGGAGAA
CGGGCAGCCGGCAGGCGTCTGTGTCCTGGAGTACGCCACTCCCTTGCAGACCTTGTTCGCCATG
TCACAGGATGGCCGCGCTGGCTTCAGCCGGGAGGATCGGCTCGAGCAGGCCAAACTCTTCTGCC
GGACCCTCGAAGACATCCTGGCAGTTGCGCCTGAGGCTCAGAACAACTGCCGCCTCATTGTCTA
CCAGGAACCCACAGAGGGAGGCAGCTTCTCCCTGTCGCAGGAGATTCTCCGGCACCTTCGGCAG
GAGGAAAGGGAGGTTACCATGGGCAGTGCGGAGACCTCAGTGGTGCCCACTTCCTCCACGCTGT
CCCAAGAGCCTGAGCTCCTCATCAGTGGCATGGAACAGCCTCTTCCACTCCGCTCAGATATCTT
CTGAGGCCCGGGGTCCCCTTGCCTGAGCCCCCGGCCATCGCCAAGAGTCTGGATCAGGGGCTTT
CTTCAGCAGCTGAAGGCCTAGCAGAGCCGTCTCCTCTGCGGAGGGCCTTTCAGAGAAGGTCCCT
GGACTTGACAGCTCACGATGACTCCTGCGACCAGTTGTCCGGGCCTCAGTGTCGGCATCTGTGA
AATGGGATTGTAACCATCGCCCTCCCTACCTCACAGGGCTGTTGTGAGGACCTAGCCACGTGGA
AGTTTTTATAAACCCTACGTGGCAGCCCAACCTAA

hide sequence

RefSeq Acc Id:

XM_021077058 ⟹ XP_020932717

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	2	141,359,402 - 141,367,222 (-)	NCBI

Sequence:

show sequence

TCCCCACTTCCTCCTCTGTTAGCCACGATGGGAGTGGGGCAAGTCAGTTCACCTCACTGTGGAA
AGTTCTGTAGCTTCCTGACAGGGTGGCTGCACAGATTAAATGAAAACATGAGCAATTCTCGGCA
TAATGTCTGAAGCATGGAAATCACGGTTCATTTCCCCACCTCCAGCCTGATTGCCCCGGCTTCA
GAGAAAGAGGATCTGCTTCTGGAAATTGGAATGAAACCACTCAGCCTGAAAGGCCCCGTGGGGC
TGGGAGCCCTTGGACAGGACCTTCTCCCCTTGCCGTCTTCCAGAAACAACCTGCGGTCTGGGAG
GCAGAAGATGCCCTACTCCAGCCTGCATCCATCCATCCCACAGCCCAGGGGCCTCAGGGCTCAG
GTGGCAGCCTTGGTCCTTCTAGGTGCCTGCTTGGTGGCCCTTTGGGGGCTGGGGGAGCTGCCAG
AATACACGCTCCGGTGGCTGGTGCTCCACCTGGCCTCCCAGCAGATAGGACTGCTGGTGAAGGG
GCTCTGCAGTCTGGCGGAGGAGCTGTGCCACGTCCACTCCAGGTACCAGAGCAGCTACTGGAGG
GCTGCGCGGGCCTGCCTGGGCTGCCCCATCCGCTGTGGAGCCCTGCTGCTGCTGTCCTGCTACT
TCTACTTCTCCATCCGAGACAAGGCTGGCCTGCCCCTCCCCTGGATGCTGGCCCTCCTGGGCCT
CTCGCAGGCCCTAAACATCCTCCTGGGCCTCCAGCACCTGGCCCCAGCTGAAGTCTCTGCAATC
TGTGAAAAAAGGAACTTCAACGTGGCTCATGGACTGGCCTGGTCTTATTACATCGGGTACCTGC
GGCTGATCCTCCCAGGGCTCCGGGCTCGGATCCAAGCTTATAATCAGCGCCACAAGAACGTACT
CGGGGGCATAGGGAACCACCGGCTGCACATCCTCTTCCCGTTGGACTGTGGGGTGCCCGATGAC
CTGAGCGTGGCTGACCCCAACATTCGCTTCCTGCACGAGCTGCCCCAGCAAAGTGCCGACCGTG
CTGGCATCAAGGGCCGGGTGTACACCAACAGCATCTATGAGCTTCTGGAGAACGGGCAGCCGGC
AGGCGTCTGTGTCCTGGAGTACGCCACTCCCTTGCAGACCTTGTTCGCCATGTCACAGGATGGC
CGCGCTGGCTTCAGCCGGGAGGATCGGCTCGAGCAGGCCAAACTCTTCTGCCGGACCCTCGAAG
ACATCCTGGCAGTTGCGCCTGAGGCTCAGAACAACTGCCGCCTCATTGTCTACCAGGAACCCAC
AGAGGGAGGCAGCTTCTCCCTGTCGCAGGAGATTCTCCGGCACCTTCGGCAGGAGGAAAGGGAG
GTTACCATGGGCAGTGCGGAGACCTCAGTGGTGCCCACTTCCTCCACGCTGTCCCAAGAGCCTG
AGCTCCTCATCAGTGGCATGGAACAGCCTCTTCCACTCCGCTCAGATATCTTCTGAGGCCCGGG
GTCCCCTTGCCTGAGCCCCCGGCCATCGCCAAGAGTCTGGATCAGGGGCTTTCTTCAGCAGCTG
AAGGCCTAGCAGAGCCGTCTCCTCTGCGGAGGGCCTTTCAGAGAAGGTCCCTGGACTTGACAGC
TCACGATGACTCCTGCGACCAGTTGTCCGGGCCTCAGTGTCGGCATCTGTGAAATGGGATTGTA
ACCATCGCCCTCCCTACCTCACAGGGCTGTTGTGAGGACCTAGCCACGTGGAAGTTTTTATAAA
CCCTACGTGGCAGCCCAACCTAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001136310	(Get FASTA)	NCBI Sequence Viewer
	XP_005661760	(Get FASTA)	NCBI Sequence Viewer
	XP_005661761	(Get FASTA)	NCBI Sequence Viewer
	XP_013850621	(Get FASTA)	NCBI Sequence Viewer
	XP_013850622	(Get FASTA)	NCBI Sequence Viewer
	XP_013850623	(Get FASTA)	NCBI Sequence Viewer
	XP_013850624	(Get FASTA)	NCBI Sequence Viewer
	XP_013850625	(Get FASTA)	NCBI Sequence Viewer
	XP_020932717	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	ACJ70708	(Get FASTA)	NCBI Sequence Viewer
	AEL97644	(Get FASTA)	NCBI Sequence Viewer
	AGS09134	(Get FASTA)	NCBI Sequence Viewer
	B8XX90	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000015264

RefSeq Acc Id:	XP_020932717 ⟸ XM_021077058
- Peptide Label:	isoform X3
- UniProtKB:	F1RGH2 (UniProtKB/TrEMBL), A0A8D1CUC6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEITVHFPTSSLIAPASEKEDLLLEIGMKPLSLKGPVGLGALGQDLLPLPSSRNNLRSGRQKMP YSSLHPSIPQPRGLRAQVAALVLLGACLVALWGLGELPEYTLRWLVLHLASQQIGLLVKGLCSL AEELCHVHSRYQSSYWRAARACLGCPIRCGALLLLSCYFYFSIRDKAGLPLPWMLALLGLSQAL NILLGLQHLAPAEVSAICEKRNFNVAHGLAWSYYIGYLRLILPGLRARIQAYNQRHKNVLGGIG NHRLHILFPLDCGVPDDLSVADPNIRFLHELPQQSADRAGIKGRVYTNSIYELLENGQPAGVCV LEYATPLQTLFAMSQDGRAGFSREDRLEQAKLFCRTLEDILAVAPEAQNNCRLIVYQEPTEGGS FSLSQEILRHLRQEEREVTMGSAETSVVPTSSTLSQEPELLISGMEQPLPLRSDIF hide sequence

RefSeq Acc Id:	XP_005661760 ⟸ XM_005661703
- Peptide Label:	isoform X2
- UniProtKB:	A0A4X1VF02 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEITVHFPTSSLIAPASEKEDLLLEIGMKPLRQGSVLKGPVGLGALGQDLLPLPSSRNNLRSGR QKMPYSSLHPSIPQPRGLRAQVAALVLLGACLVALWGLGELPEYTLRWLVLHLASQQIGLLVKG LCSLAEELCHVHSRYQSSYWRAARACLGCPIRCGALLLLSCYFYFSIRDKAGLPLPWMLALLGL SQALNILLGLQHLAPAEVSAICEKRNFNVAHGLAWSYYIGYLRLILPGLRARIQAYNQRHKNVL GGIGNHRLHILFPLDCGVPDDLSVADPNIRFLHELPQQSADRAGIKGRVYTNSIYELLENGQPA GVCVLEYATPLQTLFAMSQDGRAGFSREDRLEQAKLFCRTLEDILAVAPEAQNNCRLIVYQEPT EGGSFSLSQEILRHLRQEEREVTMGSAETSVVPTSSTLSQEPELLISGMEQPLPLRSDIF hide sequence

RefSeq Acc Id:	XP_013850625 ⟸ XM_013995171
- Peptide Label:	isoform X8
- UniProtKB:	A0A480PUE6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPERPRGAGSPWTGPSPLAVFQKQPAVWEAEGACLVALWGLGELPEYTLRWLVLHLASQQIGLL VKGLCSLAEELCHVHSRYQSSYWRAARACLGCPIRCGALLLLSCYFYFSIRDKAGLPLPWMLAL LGLSQALNILLGLQHLAPAEVSAICEKRNFNVAHGLAWSYYIGYLRLILPGLRARIQAYNQRHK NVLGGIGNHRLHILFPLDCGVPDDLSVADPNIRFLHELPQQSADRAGIKGRVYTNSIYELLENG QPAGVCVLEYATPLQTLFAMSQDGRAGFSREDRLEQAKLFCRTLEDILAVAPEAQNNCRLIVYQ EPTEGGSFSLSQEILRHLRQEEREVTMGSAETSVVPTSSTLSQEPELLISGMEQPLPLRSDIF hide sequence

RefSeq Acc Id:	XP_013850623 ⟸ XM_013995169
- Peptide Label:	isoform X6
- UniProtKB:	A0A8D0ZTL5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSEACLKGPVGLGALGQDLLPLPSSRNNLRSGRQKMPYSSLHPSIPQPRGLRAQVAALVLLGAC LVALWGLGELPEYTLRWLVLHLASQQIGLLVKGLCSLAEELCHVHSRYQSSYWRAARACLGCPI RCGALLLLSCYFYFSIRDKAGLPLPWMLALLGLSQALNILLGLQHLAPAEVSAICEKRNFNVAH GLAWSYYIGYLRLILPGLRARIQAYNQRHKNVLGGIGNHRLHILFPLDCGVPDDLSVADPNIRF LHELPQQSADRAGIKGRVYTNSIYELLENGQPAGVCVLEYATPLQTLFAMSQDGRAGFSREDRL EQAKLFCRTLEDILAVAPEAQNNCRLIVYQEPTEGGSFSLSQEILRHLRQEEREVTMGSAETSV VPTSSTLSQEPELLISGMEQPLPLRSDIF hide sequence

RefSeq Acc Id:	XP_013850624 ⟸ XM_013995170
- Peptide Label:	isoform X7
- UniProtKB:	A0A480PUE6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPDCPGFRERGSASGNWNETTQPERPRGAGSPWTGPSPLAVFQKQPAVWEAEGACLVALWGLGE LPEYTLRWLVLHLASQQIGLLVKGLCSLAEELCHVHSRYQSSYWRAARACLGCPIRCGALLLLS CYFYFSIRDKAGLPLPWMLALLGLSQALNILLGLQHLAPAEVSAICEKRNFNVAHGLAWSYYIG YLRLILPGLRARIQAYNQRHKNVLGGIGNHRLHILFPLDCGVPDDLSVADPNIRFLHELPQQSA DRAGIKGRVYTNSIYELLENGQPAGVCVLEYATPLQTLFAMSQDGRAGFSREDRLEQAKLFCRT LEDILAVAPEAQNNCRLIVYQEPTEGGSFSLSQEILRHLRQEEREVTMGSAETSVVPTSSTLSQ EPELLISGMEQPLPLRSDIF hide sequence

RefSeq Acc Id:	XP_013850622 ⟸ XM_013995168
- Peptide Label:	isoform X5
- UniProtKB:	A0A480PUE6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVVVTGNHGSFPHLQPDCPGFRERGSASGNWNETTQPERPRGAGSPWTGPSPLAVFQKQPAVWE AEGACLVALWGLGELPEYTLRWLVLHLASQQIGLLVKGLCSLAEELCHVHSRYQSSYWRAARAC LGCPIRCGALLLLSCYFYFSIRDKAGLPLPWMLALLGLSQALNILLGLQHLAPAEVSAICEKRN FNVAHGLAWSYYIGYLRLILPGLRARIQAYNQRHKNVLGGIGNHRLHILFPLDCGVPDDLSVAD PNIRFLHELPQQSADRAGIKGRVYTNSIYELLENGQPAGVCVLEYATPLQTLFAMSQDGRAGFS REDRLEQAKLFCRTLEDILAVAPEAQNNCRLIVYQEPTEGGSFSLSQEILRHLRQEEREVTMGS AETSVVPTSSTLSQEPELLISGMEQPLPLRSDIF hide sequence

RefSeq Acc Id:	XP_013850621 ⟸ XM_013995167
- Peptide Label:	isoform X4
- UniProtKB:	A0A480PUE6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVVVTGNHGSFPHLQPDCPGFRERGSASGNWNETTQAGQRPERPRGAGSPWTGPSPLAVFQKQP AVWEAEGACLVALWGLGELPEYTLRWLVLHLASQQIGLLVKGLCSLAEELCHVHSRYQSSYWRA ARACLGCPIRCGALLLLSCYFYFSIRDKAGLPLPWMLALLGLSQALNILLGLQHLAPAEVSAIC EKRNFNVAHGLAWSYYIGYLRLILPGLRARIQAYNQRHKNVLGGIGNHRLHILFPLDCGVPDDL SVADPNIRFLHELPQQSADRAGIKGRVYTNSIYELLENGQPAGVCVLEYATPLQTLFAMSQDGR AGFSREDRLEQAKLFCRTLEDILAVAPEAQNNCRLIVYQEPTEGGSFSLSQEILRHLRQEEREV TMGSAETSVVPTSSTLSQEPELLISGMEQPLPLRSDIF hide sequence

RefSeq Acc Id:	XP_005661761 ⟸ XM_005661704
- Peptide Label:	isoform X1
- UniProtKB:	A0A480PUE6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPYSSLHPSIPQPRGLRAQVAALVLLGACLVALWGLGELPEYTLRWLVLHLASQQIGLLVKGLC SLAEELCHVHSRYQSSYWRAARACLGCPIRCGALLLLSCYFYFSIRDKAGLPLPWMLALLGLSQ ALNILLGLQHLAPAEVSAICEKRNFNVAHGLAWSYYIGYLRLILPGLRARIQAYNQRHKNVLGG IGNHRLHILFPLDCGVPDDLSVADPNIRFLHELPQQSADRAGIKGRVYTNSIYELLENGQPAGV CVLEYATPLQTLFAMSQDGRAGFSREDRLEQAKLFCRTLEDILAVAPEAQNNCRLIVYQEPTEG GSFSLSQEILRHLRQEEREVTMGSAETSVVPTSSTLSQEPELLISGMEQPLPLRSDIF hide sequence

RefSeq Acc Id:

NP_001136310 ⟸ NM_001142838

- UniProtKB:

B8XX90 (UniProtKB/Swiss-Prot), A0A480PUE6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MPYSSLHPSIPQPRGLRAQVAALVLLGACLVALWGLGELPEYTLRWLVLHLASQQIGLLVKGLC
SLAEELCHVHSRYQSSYWRAARACLGCPIRCGALLLLSCYFYFSIRDKAGLPLPWMLALLGLSQ
ALNILLGLQHLAPAEVSAICEKRNFNVAHGLAWSYYIGYLRLILPGLRARIQAYNQRHKNVLGG
IGNHRLHILFPLDCGVPDDLSVADPNIRFLHELPQQSADRAGIKGRVYTNSIYELLENGQPAGV
CVLGYATPLQTLFAMSQDGRAGFSREDRLEQAKLFCRTLEDILADAPEAQNNCRLIVYQEPTEG
GSFSLSQEILRHLRQEEREVTMGSAETSVVPTSSTLSQEPELLISGMEQPLPLRSDIF

hide sequence

Ensembl Acc Id:

ENSSSCP00000070997 ⟸ ENSSSCT00000088164

Ensembl Acc Id:

ENSSSCP00000015264 ⟸ ENSSSCT00000015677

Ensembl Acc Id:

ENSSSCP00000028503 ⟸ ENSSSCT00000036520

Protein Domains

STING ligand-binding STING transmembrane

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000014349	Ensembl, ENTREZGENE
Ensembl Transcript	ENSSSCT00000015677	ENTREZGENE
Gene3D-CATH	1.20.5.5200	UniProtKB/Swiss-Prot
	3.40.50.12100	UniProtKB/Swiss-Prot
InterPro	STING	UniProtKB/Swiss-Prot
	STING_C_chordates	UniProtKB/Swiss-Prot
	STING_C_sf	UniProtKB/Swiss-Prot
	STING_LBD	UniProtKB/Swiss-Prot
	STING_TM	UniProtKB/Swiss-Prot
KEGG Report	ssc:100217389	UniProtKB/Swiss-Prot
NCBI Gene	TMEM173	ENTREZGENE
PANTHER	PTHR34339	UniProtKB/Swiss-Prot
	STIMULATOR OF INTERFERON GENES PROTEIN	UniProtKB/Swiss-Prot
Pfam	STING_TM	UniProtKB/Swiss-Prot
	TMEM173	UniProtKB/Swiss-Prot
UniProt	A0A480PUE6	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1VCA6_PIG	UniProtKB/TrEMBL
	A0A4X1VF02	ENTREZGENE, UniProtKB/TrEMBL
	A0A5G2RHU4_PIG	UniProtKB/TrEMBL
	A0A8D0MQQ1_PIG	UniProtKB/TrEMBL
	A0A8D0MQR5_PIG	UniProtKB/TrEMBL
	A0A8D0MU05_PIG	UniProtKB/TrEMBL
	A0A8D0MUP5_PIG	UniProtKB/TrEMBL
	A0A8D0WHT7_PIG	UniProtKB/TrEMBL
	A0A8D0WLN2_PIG	UniProtKB/TrEMBL
	A0A8D0ZTL5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1CUC6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1DSW5_PIG	UniProtKB/TrEMBL
	A0A8D1DSZ4_PIG	UniProtKB/TrEMBL
	A0A8D1HYH7_PIG	UniProtKB/TrEMBL
	A0A8D1SG45_PIG	UniProtKB/TrEMBL
	A0A8D1SQB5_PIG	UniProtKB/TrEMBL
	A0A8D1SU84_PIG	UniProtKB/TrEMBL
	A0A8D1TQR9_PIG	UniProtKB/TrEMBL
	A0A8D1Z6U5_PIG	UniProtKB/TrEMBL
	A0A8D1ZAR8_PIG	UniProtKB/TrEMBL
	B8XX90	ENTREZGENE
	F1RGH2	ENTREZGENE, UniProtKB/TrEMBL
	K7GKX5_PIG	UniProtKB/TrEMBL
	STING_PIG	UniProtKB/Swiss-Prot
VGNC ID	VGNC:93547	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-09-03	STING1	stimulator of interferon response cGAMP interactor 1	TMEM173	transmembrane protein 173	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM