ZNF891 (zinc finger protein 891) - Rat Genome Database

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Gene: ZNF891 (zinc finger protein 891) Sus scrofa
Analyze
Symbol: ZNF891
Name: zinc finger protein 891
RGD ID: 13984408
Description: ENCODES a protein that exhibits DNA binding (inferred); metal ion binding (inferred); INVOLVED IN regulation of DNA-templated transcription (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Chinchilla
Bonobo
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1422,502,777 - 22,525,677 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11422,502,738 - 22,521,865 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (IBA)

References
Additional References at PubMed
PMID:14681463   PMID:17145712   PMID:30032202  


Genomics

Comparative Map Data
ZNF891
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1422,502,777 - 22,525,677 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11422,502,738 - 22,521,865 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ZNF891
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812133,104,779 - 133,130,274 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl12133,104,779 - 133,130,274 (-)EnsemblGRCh38hg38GRCh38
GRCh3712133,681,365 - 133,706,860 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map12q24.33NCBI
HuRef12130,475,700 - 130,486,210 (-)NCBIHuRef
CHM1_112133,516,487 - 133,526,992 (-)NCBICHM1_1
T2T-CHM13v2.012133,162,095 - 133,187,590 (-)NCBIT2T-CHM13v2.0
Znf891
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495548286,692 - 96,745 (+)NCBIChiLan1.0ChiLan1.0
ZNF891
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v210141,217,046 - 141,242,709 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan112141,218,934 - 141,239,226 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v012130,599,520 - 130,610,515 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.112135,202,205 - 135,213,618 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12135,202,943 - 135,204,577 (-)Ensemblpanpan1.1panPan2
Znf891
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118121,839,065 - 121,846,270 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049366602,874,228 - 2,882,015 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF891
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.111128,419,257 - 128,425,834 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666037116,361,730 - 116,372,849 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf891
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474728,356,472 - 28,369,331 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ZNF891
272 total Variants

Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
10 4 23 3 2 5 14 12 23 3 6 3

Sequence


Ensembl Acc Id: ENSSSCT00000041945   ⟹   ENSSSCP00000042356
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl1422,502,777 - 22,525,677 (+)Ensembl
RefSeq Acc Id: XM_021072903   ⟹   XP_020928562
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.11422,502,738 - 22,521,865 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_020928562 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000042356
  ENSSSCP00000042356.1
  ENSSSCP00035038634.1
  ENSSSCP00045011381.1
  ENSSSCP00050005059.1
  ENSSSCP00065009336.1
RefSeq Acc Id: XP_020928562   ⟸   XM_021072903
- UniProtKB: A0A287AEQ7 (UniProtKB/TrEMBL),   A0A8D1B2C8 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSSCP00000042356   ⟸   ENSSSCT00000041945
Protein Domains
C2H2-type   KRAB


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000037951 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00035068279 UniProtKB/TrEMBL
  ENSSSCG00045009757 UniProtKB/TrEMBL
  ENSSSCG00050008936 UniProtKB/TrEMBL
  ENSSSCG00065017293 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000041945 ENTREZGENE
  ENSSSCT00000041945.3 UniProtKB/TrEMBL
  ENSSSCT00035092121.1 UniProtKB/TrEMBL
  ENSSSCT00045016495.1 UniProtKB/TrEMBL
  ENSSSCT00050012068.1 UniProtKB/TrEMBL
  ENSSSCT00065022967.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.140.140 UniProtKB/TrEMBL
  Classic Zinc Finger UniProtKB/TrEMBL
InterPro KRAB UniProtKB/TrEMBL
  KRAB_dom_sf UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
NCBI Gene ZNF891 ENTREZGENE
PANTHER RCG31665-RELATED UniProtKB/TrEMBL
  ZINC FINGER AND SCAN DOMAIN-CONTAINING UniProtKB/TrEMBL
Pfam KRAB UniProtKB/TrEMBL
  zf-C2H2 UniProtKB/TrEMBL
  zf-H2C2_2 UniProtKB/TrEMBL
PROSITE KRAB UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART KRAB UniProtKB/TrEMBL
  ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF109640 UniProtKB/TrEMBL
  SSF57667 UniProtKB/TrEMBL
UniProt A0A287AEQ7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1B2C8 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:98430 ENTREZGENE