BSP1 (binder of sperm 1) - Rat Genome Database

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Gene: BSP1 (binder of sperm 1) Sus scrofa
Analyze
No known orthologs.
Symbol: BSP1
Name: binder of sperm 1
RGD ID: 13980553
Description: ENCODES a protein that exhibits heparin binding (inferred); INVOLVED IN single fertilization (inferred); sperm capacitation (inferred); FOUND IN cell surface (inferred); extracellular region (inferred); extracellular space (inferred)
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: DQH protein; pAIF-1; PB1; seminal plasma protein pB1
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl650,278,750 - 50,280,779 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1650,278,750 - 50,280,780 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2646,138,657 - 46,140,689 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function
heparin binding  (IBA,IEA)

References
Additional References at PubMed
PMID:9166899   PMID:10206662   PMID:17123943   PMID:17270277   PMID:18923155   PMID:22301074   PMID:23550158   PMID:30032202  


Genomics

Variants

.
Variants in BSP1
25 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

hemolymphoid system nervous system reproductive system respiratory system
High
Medium 1
Low 1
Below cutoff 1 1 1

Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000003390   ⟹   ENSSSCP00000003307
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl650,278,750 - 50,280,779 (+)Ensembl
RefSeq Acc Id: NM_213832   ⟹   NP_998997
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1650,278,750 - 50,280,780 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_998997   ⟸   NM_213832
- Peptide Label: precursor
- UniProtKB: O46615 (UniProtKB/Swiss-Prot),   P80964 (UniProtKB/Swiss-Prot),   A0A2C9F357 (UniProtKB/TrEMBL),   A0A4X1W3D7 (UniProtKB/TrEMBL),   A0A8D0IVH5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000003307   ⟸   ENSSSCT00000003390
Protein Domains
Fibronectin type-II


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000003053 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSSSCG00005015426 UniProtKB/TrEMBL
  ENSSSCG00015044944 UniProtKB/TrEMBL
  ENSSSCG00025074410 UniProtKB/TrEMBL
  ENSSSCG00030074061 UniProtKB/TrEMBL
  ENSSSCG00035008575 UniProtKB/TrEMBL
  ENSSSCG00040030504 UniProtKB/TrEMBL
  ENSSSCG00045016481 UniProtKB/TrEMBL
  ENSSSCG00050015970 UniProtKB/TrEMBL
  ENSSSCG00055027966 UniProtKB/TrEMBL
  ENSSSCG00060077999 UniProtKB/TrEMBL
  ENSSSCG00065061988 UniProtKB/TrEMBL
  ENSSSCG00070028462 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000003390 ENTREZGENE
  ENSSSCT00000003390.3 UniProtKB/TrEMBL
  ENSSSCT00000003390.4 UniProtKB/Swiss-Prot
  ENSSSCT00005024178.1 UniProtKB/TrEMBL
  ENSSSCT00015060093.1 UniProtKB/TrEMBL
  ENSSSCT00025102513.1 UniProtKB/TrEMBL
  ENSSSCT00030103824.1 UniProtKB/TrEMBL
  ENSSSCT00035010705.1 UniProtKB/TrEMBL
  ENSSSCT00040041010.1 UniProtKB/TrEMBL
  ENSSSCT00045028021.1 UniProtKB/TrEMBL
  ENSSSCT00050021700.1 UniProtKB/TrEMBL
  ENSSSCT00055055381.1 UniProtKB/TrEMBL
  ENSSSCT00060107555.1 UniProtKB/TrEMBL
  ENSSSCT00065085009.1 UniProtKB/TrEMBL
  ENSSSCT00070057065.1 UniProtKB/TrEMBL
Gene3D-CATH 2.10.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro FN_type2_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FN_type2_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kringle-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Seminal_plasma_PDC-109-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report ssc:396806 UniProtKB/Swiss-Prot
NCBI Gene BSP1 ENTREZGENE
PANTHER SEMINAL PLASMA PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SEMINAL PLASMA PROTEIN HSP-1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam fn2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PIRSF Seminal_plasma_PDC-109 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS FNTYPEII UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE FN2_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FN2_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART FN2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF57440 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A2C9F357 ENTREZGENE
  A0A4X1W3D7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0IVH5 ENTREZGENE, UniProtKB/TrEMBL
  O46615 ENTREZGENE
  P80964 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary A0A2C9F357 UniProtKB/TrEMBL
  O46615 UniProtKB/Swiss-Prot