ZDHHC22 (zinc finger DHHC-type palmitoyltransferase 22) - Rat Genome Database

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Gene: ZDHHC22 (zinc finger DHHC-type palmitoyltransferase 22) Sus scrofa
Analyze
Symbol: ZDHHC22
Name: zinc finger DHHC-type palmitoyltransferase 22
RGD ID: 13976596
Description: ENCODES a protein that exhibits acyltransferase activity (inferred); palmitoyltransferase activity (inferred); protein-cysteine S-palmitoyltransferase activity (inferred); INVOLVED IN protein localization to plasma membrane (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); FOUND IN endoplasmic reticulum (inferred); endoplasmic reticulum membrane (inferred); Golgi apparatus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: palmitoyltransferase ZDHHC22; zinc finger DHHC-type containing 22
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl7100,212,625 - 100,221,956 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.17100,212,946 - 100,225,540 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.27106,244,314 - 106,256,073 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ZDHHC22
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl7100,212,625 - 100,221,956 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.17100,212,946 - 100,225,540 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.27106,244,314 - 106,256,073 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ZDHHC22
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381477,131,270 - 77,142,288 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1477,131,270 - 77,142,734 (-)EnsemblGRCh38hg38GRCh38
GRCh371477,597,613 - 77,608,134 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361476,667,366 - 76,677,887 (-)NCBINCBI36Build 36hg18NCBI36
Build 341476,667,373 - 76,677,887NCBI
Celera1457,636,210 - 57,646,730 (-)NCBICelera
Cytogenetic Map14q24.3NCBI
HuRef1457,765,314 - 57,775,844 (-)NCBIHuRef
CHM1_11477,536,028 - 77,546,544 (-)NCBICHM1_1
T2T-CHM13v2.01471,341,038 - 71,352,076 (-)NCBIT2T-CHM13v2.0
Zdhhc22
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391287,027,537 - 87,037,604 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1287,027,537 - 87,037,204 (-)EnsemblGRCm39 Ensembl
GRCm381286,980,763 - 86,990,830 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1286,980,763 - 86,990,430 (-)EnsemblGRCm38mm10GRCm38
MGSCv371288,324,331 - 88,329,626 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361287,872,484 - 87,879,533 (-)NCBIMGSCv36mm8
Celera1288,447,201 - 88,452,496 (-)NCBICelera
Cytogenetic Map12D2NCBI
cM Map1241.17NCBI
Zdhhc22
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86112,360,051 - 112,377,950 (-)NCBIGRCr8
mRatBN7.26106,629,090 - 106,646,996 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6106,631,609 - 106,638,872 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx6106,796,171 - 106,805,946 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.06107,095,034 - 107,104,809 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.06106,464,674 - 106,474,450 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06111,008,440 - 111,015,695 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6111,007,674 - 111,015,598 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06120,299,219 - 120,306,474 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46111,116,242 - 111,123,497 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16111,124,426 - 111,127,028 (-)NCBI
Celera6104,453,066 - 104,460,314 (-)NCBICelera
Cytogenetic Map6q31NCBI
Zdhhc22
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554381,048,072 - 1,058,531 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554381,048,072 - 1,058,142 (-)NCBIChiLan1.0ChiLan1.0
ZDHHC22
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21578,215,738 - 78,230,749 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11477,432,242 - 77,447,250 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01457,681,164 - 57,698,136 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11476,887,628 - 76,900,008 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1476,887,628 - 76,897,290 (-)Ensemblpanpan1.1panPan2
ZDHHC22
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1849,961,013 - 49,971,688 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl849,893,892 - 49,970,650 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha849,645,189 - 49,659,262 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0850,190,898 - 50,204,948 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl850,191,701 - 50,204,965 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1849,853,683 - 49,867,717 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0849,876,972 - 49,890,965 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0850,275,059 - 50,289,108 (-)NCBIUU_Cfam_GSD_1.0
Zdhhc22
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864026,091,106 - 26,101,133 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364885,967,827 - 5,977,907 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364885,967,835 - 5,977,830 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZDHHC22
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12454,375,827 - 54,386,382 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2454,378,262 - 54,384,370 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605342,577,315 - 42,587,871 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Zdhhc22
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473424,745,754 - 24,755,951 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473424,745,753 - 24,755,951 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ZDHHC22
345 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

nervous system
High
Medium 15
Low 5
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000047272   ⟹   ENSSSCP00000049201
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl7100,212,625 - 100,221,956 (-)Ensembl
RefSeq Acc Id: XM_001928417   ⟹   XP_001928452
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.17100,212,946 - 100,225,540 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_001928452   ⟸   XM_001928417
- UniProtKB: A0A287AZ83 (UniProtKB/TrEMBL),   A0A4X1T7S0 (UniProtKB/TrEMBL),   A0A8D0TA83 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000049201   ⟸   ENSSSCT00000047272
Protein Domains
SSD


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000033688 Ensembl, UniProtKB/TrEMBL
  ENSSSCG00005001718 UniProtKB/TrEMBL
  ENSSSCG00015040950 UniProtKB/TrEMBL
  ENSSSCG00025070786 UniProtKB/TrEMBL
  ENSSSCG00030029036 UniProtKB/TrEMBL
  ENSSSCG00035023487 UniProtKB/TrEMBL
  ENSSSCG00040029033 UniProtKB/TrEMBL
  ENSSSCG00045022351 UniProtKB/TrEMBL
  ENSSSCG00050053406 UniProtKB/TrEMBL
  ENSSSCG00055002770 UniProtKB/TrEMBL
  ENSSSCG00060049319 UniProtKB/TrEMBL
  ENSSSCG00065050669 UniProtKB/TrEMBL
  ENSSSCG00070006843 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000047272.3 UniProtKB/TrEMBL
  ENSSSCT00005002526.1 UniProtKB/TrEMBL
  ENSSSCT00005002532.1 UniProtKB/TrEMBL
  ENSSSCT00015054562.1 UniProtKB/TrEMBL
  ENSSSCT00025097201.1 UniProtKB/TrEMBL
  ENSSSCT00030040477.1 UniProtKB/TrEMBL
  ENSSSCT00035030785.1 UniProtKB/TrEMBL
  ENSSSCT00040039015.1 UniProtKB/TrEMBL
  ENSSSCT00045038143.1 UniProtKB/TrEMBL
  ENSSSCT00050072735.1 UniProtKB/TrEMBL
  ENSSSCT00055005293.1 UniProtKB/TrEMBL
  ENSSSCT00060066975.1 UniProtKB/TrEMBL
  ENSSSCT00065069400.1 UniProtKB/TrEMBL
  ENSSSCT00070013124.1 UniProtKB/TrEMBL
InterPro Palmitoyltrfase_DHHC UniProtKB/TrEMBL
  SSD UniProtKB/TrEMBL
KEGG Report ssc:100158012 UniProtKB/TrEMBL
NCBI Gene ZDHHC22 ENTREZGENE
PANTHER PALMITOYLTRANSFERASE ZDHHC16 UniProtKB/TrEMBL
  PALMITOYLTRANSFERASE ZDHHC16B UniProtKB/TrEMBL
Pfam DHHC UniProtKB/TrEMBL
PROSITE DHHC UniProtKB/TrEMBL
  SSD UniProtKB/TrEMBL
UniProt A0A287AZ83 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1T7S0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0TA83 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:95124 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-10-22 ZDHHC22  zinc finger DHHC-type palmitoyltransferase 22  ZDHHC22  zinc finger DHHC-type containing 22  Symbol and/or name change 5135510 APPROVED