SLC25A41 (solute carrier family 25 member 41) - Rat Genome Database

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Gene: SLC25A41 (solute carrier family 25 member 41) Sus scrofa
Analyze
Symbol: SLC25A41
Name: solute carrier family 25 member 41
RGD ID: 13975394
Description: ENCODES a protein that exhibits ADP transmembrane transporter activity (inferred); ATP transmembrane transporter activity (inferred); INVOLVED IN ADP transport (inferred); ATP transport (inferred); mitochondrial ADP transmembrane transport (inferred); FOUND IN membrane (inferred); mitochondrion (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl272,647,470 - 72,655,473 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1272,645,505 - 72,655,240 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2273,066,422 - 73,069,673 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA)
mitochondrion  (IEA)

Molecular Function

References

Genomics

Comparative Map Data
SLC25A41
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl272,647,470 - 72,655,473 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1272,645,505 - 72,655,240 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2273,066,422 - 73,069,673 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SLC25A41
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38196,426,037 - 6,436,267 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl196,426,037 - 6,433,779 (-)EnsemblGRCh38hg38GRCh38
GRCh37196,426,048 - 6,433,774 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36196,377,048 - 6,384,790 (-)NCBINCBI36Build 36hg18NCBI36
Celera196,364,835 - 6,373,632 (-)NCBICelera
Cytogenetic Map19p13.3NCBI
HuRef196,186,854 - 6,194,662 (-)NCBIHuRef
CHM1_1196,425,653 - 6,433,369 (-)NCBICHM1_1
T2T-CHM13v2.0196,414,920 - 6,423,279 (-)NCBIT2T-CHM13v2.0
Slc25a41
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391757,339,772 - 57,348,654 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1757,339,773 - 57,348,654 (-)EnsemblGRCm39 Ensembl
GRCm381757,032,772 - 57,041,654 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1757,032,773 - 57,041,654 (-)EnsemblGRCm38mm10GRCm38
MGSCv371757,172,195 - 57,181,077 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361756,717,902 - 56,724,338 (-)NCBIMGSCv36mm8
Celera1761,380,698 - 61,389,589 (-)NCBICelera
Cytogenetic Map17DNCBI
Slc25a41
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.291,873,692 - 1,881,405 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl91,873,692 - 1,881,424 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx92,307,560 - 2,315,267 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.097,656,919 - 7,664,624 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.096,612,779 - 6,620,485 (-)NCBIRnor_WKY
Rnor_6.0910,004,811 - 10,012,539 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl910,004,805 - 10,012,611 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.099,005,494 - 9,013,189 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera96,636,042 - 6,643,741 (+)NCBICelera
Cytogenetic Map9q12NCBI
Slc25a41
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554953,175,892 - 3,183,229 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554953,175,892 - 3,182,637 (+)NCBIChiLan1.0ChiLan1.0
SLC25A41
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1196,371,338 - 6,382,413 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl196,371,338 - 6,382,413 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0195,446,931 - 5,449,135 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
SLC25A41
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12053,737,302 - 53,744,248 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2053,738,125 - 53,744,262 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2053,483,887 - 53,491,261 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02054,391,034 - 54,398,394 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2054,392,297 - 54,398,408 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12053,457,666 - 53,465,043 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02053,906,086 - 53,913,457 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02054,135,303 - 54,142,672 (+)NCBIUU_Cfam_GSD_1.0
Slc25a41
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118214,048,321 - 214,057,680 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049365883,777,113 - 3,786,643 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC25A41
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.166,031,015 - 6,038,496 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl66,031,366 - 6,038,187 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660811,963,206 - 1,970,696 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system nervous system renal system
High
Medium
Low 4 12 1
Below cutoff 1 4 1

Sequence


Reference Sequences
RefSeq Acc Id: ENSSSCT00000062723   ⟹   ENSSSCP00000034855
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl272,647,470 - 72,655,473 (+)Ensembl
RefSeq Acc Id: XM_021083988   ⟹   XP_020939647
RefSeq Status:
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1272,645,505 - 72,655,240 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_020939647 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_020939647   ⟸   XM_021083988
- UniProtKB: A0A286ZTP6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000034855   ⟸   ENSSSCT00000062723


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000032785 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSSSCP00000034855 ENTREZGENE
  ENSSSCP00000034855.2 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000062723 ENTREZGENE
  ENSSSCT00000062723.2 UniProtKB/TrEMBL
Gene3D-CATH 1.50.40.10 UniProtKB/TrEMBL
InterPro Mit_carrier UniProtKB/TrEMBL
  Mitochondrial_sb/sol_carrier UniProtKB/TrEMBL
  Mt_carrier_dom_sf UniProtKB/TrEMBL
NCBI Gene SLC25A41 ENTREZGENE
Pfam Mito_carr UniProtKB/TrEMBL
PRINTS MITOCARRIER UniProtKB/TrEMBL
PROSITE SOLCAR UniProtKB/TrEMBL
Superfamily-SCOP SSF103506 UniProtKB/TrEMBL
UniProt A0A286ZTP6 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:108759 ENTREZGENE