SLC36A4 (solute carrier family 36 member 4)

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Gene: SLC36A4 (solute carrier family 36 member 4) Sus scrofa

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Symbol:

SLC36A4

Name:

solute carrier family 36 member 4

RGD ID:

13975015

Description:

ENCODES a protein that exhibits L-alanine transmembrane transporter activity (inferred); L-proline transmembrane transporter activity (inferred); L-tryptophan transmembrane transporter activity (inferred); INVOLVED IN L-alanine transport (inferred); proline transmembrane transport (inferred); proline transport (inferred); PARTICIPATES IN nicotinamide adenine dinucleotide metabolic pathway; ASSOCIATED WITH intellectual disability (ortholog); FOUND IN lysosomal membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

proton-coupled amino acid transporter 4

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	25,639,387 - 25,689,028 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	25,639,370 - 25,689,177 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	28,983,529 - 29,033,251 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

intellectual disability (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

amino acid transmembrane transport (IBA)

L-alanine transport (IBA,IEA)

proline transmembrane transport (IEA)

proline transport (IEA)

tryptophan transport (IEA)

Cellular Component

lysosomal membrane (ISO)

membrane (IEA)

vacuolar membrane (IBA)

Molecular Function

L-alanine transmembrane transporter activity (IBA,IEA)

L-proline transmembrane transporter activity (IBA,IEA)

L-tryptophan transmembrane transporter activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

nicotinamide adenine dinucleotide metabolic pathway (ISO)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:28943389	PMID:30032202

Genomics

Comparative Map Data

SLC36A4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	25,639,387 - 25,689,028 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	25,639,370 - 25,689,177 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	28,983,529 - 29,033,251 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC36A4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	93,144,174 - 93,197,991 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	93,144,174 - 93,197,991 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	92,877,340 - 92,931,157 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	92,520,498 - 92,570,743 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	11	92,520,499 - 92,570,743	NCBI
Celera	11	90,179,804 - 90,230,049 (-)	NCBI		Celera
Cytogenetic Map	11	q21	NCBI
HuRef	11	88,965,724 - 89,015,692 (-)	NCBI		HuRef
CHM1_1	11	92,763,842 - 92,814,140 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	93,066,962 - 93,120,802 (-)	NCBI		T2T-CHM13v2.0

Slc36a4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	15,621,034 - 15,653,684 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	15,621,034 - 15,654,657 (+)	Ensembl		GRCm39 Ensembl
GRCm38	9	15,709,738 - 15,742,388 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	15,709,738 - 15,743,361 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	15,514,213 - 15,543,233 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	15,460,162 - 15,489,182 (+)	NCBI		MGSCv36	mm8
Celera	9	12,988,023 - 13,017,043 (+)	NCBI		Celera
Cytogenetic Map	9	A2	NCBI
cM Map	9	5.12	NCBI

Slc36a4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	20,801,256 - 20,834,046 (+)	NCBI		GRCr8
mRatBN7.2	8	12,519,613 - 12,552,671 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	12,519,943 - 12,552,031 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	16,506,726 - 16,536,678 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	14,804,480 - 14,834,432 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	12,782,331 - 12,813,520 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	14,238,975 - 14,271,931 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	14,239,594 - 14,269,162 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	14,329,327 - 14,360,233 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	12,504,817 - 12,534,782 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	12,504,818 - 12,533,407 (+)	NCBI
Celera	8	13,985,685 - 14,015,651 (+)	NCBI		Celera
Cytogenetic Map	8	q12	NCBI

Slc36a4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955414	1,236,141 - 1,285,610 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955414	1,236,179 - 1,286,680 (+)	NCBI	ChiLan1.0	ChiLan1.0

SLC36A4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	94,008,249 - 94,062,806 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	95,097,192 - 95,150,608 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	88,164,083 - 88,218,610 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	91,662,625 - 91,880,929 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	91,663,479 - 91,713,388 (-)	Ensembl	panpan1.1		panPan2

SLC36A4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	21	7,476,291 - 7,523,463 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	21	7,475,648 - 7,520,331 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	21	7,474,725 - 7,538,019 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	21	7,635,696 - 7,698,997 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	21	7,635,686 - 7,698,993 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	21	7,421,675 - 7,481,882 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	21	7,490,947 - 7,554,286 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	21	7,535,348 - 7,598,628 (+)	NCBI		UU_Cfam_GSD_1.0

Slc36a4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	78,289,864 - 78,363,803 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936674	1,567,675 - 1,601,635 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936674	1,567,718 - 1,601,561 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC36A4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	84,393,698 - 84,487,984 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	84,398,027 - 84,445,971 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666043	41,344,168 - 41,395,986 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc36a4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624735	37,791,206 - 37,831,776 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624735	37,791,690 - 37,831,749 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in SLC36A4
2235 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005667225	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013979268	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021062637	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000070	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK348600	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GFLN01010887	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000023503 ⟹ ENSSSCP00000022788

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	9	25,639,387 - 25,689,028 (-)	Ensembl

Ensembl Acc Id:

ENSSSCT00000078849 ⟹ ENSSSCP00000066780

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	9	25,639,388 - 25,689,001 (-)	Ensembl

RefSeq Acc Id:

XM_005667225 ⟹ XP_005667282

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	25,639,370 - 25,689,177 (-)	NCBI

Sequence:

show sequence

TCTGGTCACCCTGCCATTCTCCAGACCCGCCTCCGCCCACTCAGGTCTTCCACTCCGAGCTCGG
CTCACTGGCAGCGCCCCAGAGCCCAAGGCGGGCCCCGCGCTGGGGCGCCTCCGCCGGGCCGGGC
CGGGCCGGGCTGCCCCACTGCGCATGCTCCCCGCCGCGCGGGTGGGGTGCGCGGGGCCGGGGAG
GTCTCGGCCTGACGCCGGCCACGCAGCAGCGGGAGCGCGCGCCTCGGGGCGGCGGCGTCCTGGA
GACCCCCGAGAGATGGAAGCGGCGGCGCCGGCGGCGGCCGAGGCGGCTGGGCGCGAGGAGCTCG
ATATGGATGTAATGAGGCCCTTAATAAATGAGCAGAATTTTGATGGAACATCAGATGAAGAACA
TGAGCAAGAGCTCCTGCCTGTTCAGAAGCATTACCAGCTTGATGATCAAGAGGGTATTTCATTT
GTACAAACTCTTATGCATCTTCTTAAAGGAAATATTGGAACTGGCCTTTTAGGACTTCCACTGG
CAATAAAAAATGCAGGCATAGTGCTTGGACCAATCAGCCTTGTGTTTATAGGAATTATTTCTGT
TCACTGTATGCACATCTTGGTACGTTGCAGTCATTTTCTATGTCAGAGGTTTAAAAAGTCAACA
TTAGGTTATAGTGACACTGTTAGTTTTGCTATGGAAGTAAGTCCCTGGAGTTGTCTGCAGAAGC
AAGCAGCATGGGGACGGAGTGTGGTTGACTTTTTTCTGGTGATAACCCAGCTAGGATTCTGTAG
TGTTTATATTGTCTTCTTAGCTGAAAATGTAAAACAAGTTCATGAAGGGTTCTTGGAGAATAAA
GTGTTTGTTTTGAATAGTACCAATTCATCAAATCCATGTGAGAGAAGAACTGTTGACCTAAGGA
TATACATGCTTTGCTTTCTTCCACTTTTAATTCTTTTGGTCTTCATTCGTGAGCTGAAGAATCT
ATTTGTATTTTCATTCCTTGCCAACATTTCCATGGCTGTCAGTCTTGTGATAATTTATCAGTAC
GTTGTTAGGAATATGCCAGATCCCCACAACCTTCCAATAGTGGCTGGTTGGAAAAAATACCCTC
TCTTTTTTGGTACTGCCGTGTTTGCTTTTGAAGGCATAGGAGTGGTCCTTCCGCTTGAAAATCA
AATGAAAGACTCCAGACGCTTCCCCCAAGCATTGAATATTGGCATGGGAATTGTTACAACTCTG
TATATAACCTTAGCTACCTTAGGATATATGTGTTTCCATGATGAAATCAAAGGCAGCATAACTT
TAAATCTTCCCCAAGATGTATGGTTATATCAATCAGTGAAAATTCTGTATTCCTTCGGCATCTT
TGTGACATACTCGATTCAGTTCTATGTTCCAGCAGAGATAATTATTCCTGTGATCACATCCAAA
TTTCATGCTAAATGGAAGCAAATCTGTGAATTTGCAATAAGGTCCTTCTTGGTAACCATTACTT
GTGCCGGAGCGATTCTGATTCCTCGTTTAGACATTGTGATTTCCTTTGTTGGAGCCGTGAGCAG
CAGCACGTTGGCCCTGATCCTACCGCCCTTGGTTGAAATCCTGACATTTTCTAAGGAGCACTAC
AATATATGGATGATCCTGAAAAATATTTCTATCGCATTCACTGGGGTTGTTGGTTTCTTGTTAG
GTACATATGTAACTGTGGAAGAAATTCTCTATCCGACTCCCAGAGTTCCCGCTGGCACTCCACA
GAGTTCCTCTTTAAGCTTGAATTCAACATCGTGCTTTATATCTGGTTTGAAATAGCAAAAGCAG
AATTAGGAGCCTTCTACATTTTGTCTCGTCTGGAATTGATTAAAATAGCTAGTCGAATACATTG
CTATTTACTGAAACAGAGAACCAAACTGTTTTCTATTTATTTTGGCAGTAAGTTATAATTCTTT
TCCAGTTCTGATAAACTATGACAGATTCTTGGTTTTTACGTATTAGCAGCCATTTGGGAAAAGT
TAGTTTTGAAAAATGAAAAAATTAAAGAATGAAAATACTTCTGTTATTCTTCATTCAATCAGAA
ATACTTTAACCAAGATTCTCACTTTTAGCCTCATGCTACTTTTTTGCCACCCAGTTGAGAAAAC
AGGGTTTCACCAGTAAGAACATGAAAGAAGCATATAGGTAATGAAAATCTGACCGTGCCAGTGA
GTGTCAAAGTATACTTTGTATAATGTAAAAAGATCTCAGTTATGTTTTTATTAGAGAGCCAAAT
AAACCTTGGGAGTTGAGAAAACTCTCATTAGCCATAATGTAAACATCAGAAAATCCCCCAACCA
GCATTATTTTTGTACTATTCTGTCATGGTAGCTGATCTTCATAATGAAAACCAGGAGGCCCTGT
GCAAGATTCCGACTTAGCCTGACAAATTTGAAAGAGACTTTATCCAATACAAATTCCCCCACCC
CGCCTTTCTTTTTGCGTGAGAAAATCGATGCCCACGGTGGTTTAGTAACTCGGTCAAGACCACT
CAGCCCTGAGATCAAGCGAATCTCATCTTTTGATTCCCAGGATTTTTTTATCGTTCACATCACA
TCCTAGAAAAAGAATAAACTATGTTCAGTTTAACTTTGGAGTTTGTTCTAATTACATTTTAAAT
ACTTGGAAGGTCGTGATCTTTGATGAGTATATATAACCTGAACAGGAAGTCAGGGAACTCTCAA
AAGCCATGTGAGCCTCAAGGTGGGAACGAAGCGCTGCTTTTTGAGCCTTGCTGGCGTAACTGCT
GGCTGGTAGCGGGTGCCCAGCTCTCCTGTGTGGGGCTCAAGCTCTCCTGACTGTTTCTTCTTCT
CTAAGTTTGTAGGCACCACCTTCCCTTCCCTATTGGCAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_013979268 ⟹ XP_013834722

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	25,639,651 - 25,688,980 (-)	NCBI

Sequence:

show sequence

GGCCTGACGCCGGCCACGCAGCAGCGGGAGCGCGCGCCTCGGGGCGGCGGCGTCCTGGAGACCC
CCGAGAGATGGAAGCGGCGGCGCCGGCGGCGGCCGAGGCGGCTGGGCGCGAGGAGCTCGATATG
GATGTAATGAGGCCCTTAATAAATGAGCAGAATTTTGATGGAACATCAGATGAAGAACATGAGC
AAGAGCTCCTGCCTGTTCAGAAGCATTACCAGCTTGATGATCAAGAGGGTATTTCATTTGTACA
AACTCTTATGCATCTTCTTAAAGGAAATATTGGAACTGGCCTTTTAGGACTTCCACTGGCAATA
AAAAATGCAGGCATAGTGCTTGGACCAATCAGCCTTGTGTTTATAGGAATTATTTCTGTTCACT
GTATGCACATCTTGGTTTAAAAAGTCAACATTAGGTTATAGTGACACTGTTAGTTTTGCTATGG
AAGTAAGTCCCTGGAGTTGTCTGCAGAAGCAAGCAGCATGGGGACGGAGTGTGGTTGACTTTTT
TCTGGTGATAACCCAGCTAGGATTCTGTAGTGTTTATATTGTCTTCTTAGCTGAAAATGTAAAA
CAAGTTCATGAAGGGTTCTTGGAGAATAAAGTGTTTGTTTTGAATAGTACCAATTCATCAAATC
CATGTGAGAGAAGAACTGTTGACCTAAGGATATACATGCTTTGCTTTCTTCCACTTTTAATTCT
TTTGGTCTTCATTCGTGAGCTGAAGAATCTATTTGTATTTTCATTCCTTGCCAACATTTCCATG
GCTGTCAGTCTTGTGATAATTTATCAGTACGTTGTTAGGAATATGCCAGATCCCCACAACCTTC
CAATAGTGGCTGGTTGGAAAAAATACCCTCTCTTTTTTGGTACTGCCGTGTTTGCTTTTGAAGG
CATAGGAGTGGTCCTTCCGCTTGAAAATCAAATGAAAGACTCCAGACGCTTCCCCCAAGCATTG
AATATTGGCATGGGAATTGTTACAACTCTGTATATAACCTTAGCTACCTTAGGATATATGTGTT
TCCATGATGAAATCAAAGGCAGCATAACTTTAAATCTTCCCCAAGATGTATGGTTATATCAATC
AGTGAAAATTCTGTATTCCTTCGGCATCTTTGTGACATACTCGATTCAGTTCTATGTTCCAGCA
GAGATAATTATTCCTGTGATCACATCCAAATTTCATGCTAAATGGAAGCAAATCTGTGAATTTG
CAATAAGGTCCTTCTTGGTAACCATTACTTGTGCCGGAGCGATTCTGATTCCTCGTTTAGACAT
TGTGATTTCCTTTGTTGGAGCCGTGAGCAGCAGCACGTTGGCCCTGATCCTACCGCCCTTGGTT
GAAATCCTGACATTTTCTAAGGAGCACTACAATATATGGATGATCCTGAAAAATATTTCTATCG
CATTCACTGGGGTTGTTGGTTTCTTGTTAGGTACATATGTAACTGTGGAAGAAATTCTCTATCC
GACTCCCAGAGTTCCCGCTGGCACTCCACAGAGTTCCTCTTTAAGCTTGAATTCAACATCGTGC
TTTATATCTGGTTTGAAATAGCAAAAGCAGAATTAGGAGCCTTCTACATTTTGTCTCGTCTGGA
ATTGATTAAAATAGCTAGTCGAATACATTGCTATTTACTGAAACAGAGAACCAAACTGTTTTCT
ATTTATTTTGGCAGTAAGTTATAATTCTTTTCCAGTTCTGATAAACTATGACAGATTCTTGGTT
TTTACGTATTAGCAGCCATTTGGGAAAAGTTAGTTTTGAAAAATGAAAAAATTAAAGAATGAAA
ATACTTCTGTTATTCTTCATTCAATCAGAAATACTTTAACCAAGATTCTCACTTTTAGCCTCAT
GCTACTTTTTTGCCACCCAGTTGAGAAAACAGGGTTTCACCAGTAAGAACATGAAAGAAGCATA
TAGGTAATGAAAATCTGACCGTGCCAGTGAGTGTCAAAGTATACTTTGTATAATGTAAAAAGAT
CTCAGTTATGTTTTTATTAGAGAGCCAAATAAACCTTGGGAGTTGAGAAAACTCTCATTAGCCA
TAATGTAAACATCAGAAAATCCCCCAACCAGCATTATTTTTGTACTATTCTGTCATGGTAGCTG
ATCTTCATAATGAAAACCAGGAGGCCCTGTGCAAGATTCCGACTTAGCCTGACAAATTTGAAAG
AGACTTTATCCAATACAAATTCCCCCACCCCGCCTTTCTTTTTGCGTGAGAAAATCGATGCCCA
CGGTGGTTTAGTAACTCGGTCAAGACCACTCAGCCCTGAGATCAAGCGAATCTCATCTTTTGAT
TCCCAGGATTTTTTTATCGTTCACATCACATCCTAGAAAAAGAATAAACTATGTTCAGT

hide sequence

RefSeq Acc Id:

XM_021062637 ⟹ XP_020918296

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	9	25,639,651 - 25,683,262 (-)	NCBI

Sequence:

show sequence

AACTGGAACAATTACTTTTAAAATTTGTATGGAAACACAAAAGACCCTGAATAGCCAAAACAAC
CTTGAGAAAGAAGAACTGAGCTGGAAGAATCATGCTCCCTGACCTCAGACCACACTAAAAAGCT
ACAGTATCAAAACAGTATGGTACTGGCACAAACAACAGAAACATAAATCAGTGGAATAGGAGAG
AGAGCACAGAAATCAACCCACATGTTTAAGGGCACTTAATCAGTGACAAAAGAGATATGGATGT
AATGAGGCCCTTAATAAATGAGCAGAATTTTGATGGAACATCAGATGAAGAACATGAGCAAGAG
CTCCTGCCTGTTCAGAAGCATTACCAGCTTGATGATCAAGAGGGTATTTCATTTGTACAAACTC
TTATGCATCTTCTTAAAGGAAATATTGGAACTGGCCTTTTAGGACTTCCACTGGCAATAAAAAA
TGCAGGCATAGTGCTTGGACCAATCAGCCTTGTGTTTATAGGAATTATTTCTGTTCACTGTATG
CACATCTTGGTACGTTGCAGTCATTTTCTATGTCAGAGGTTTAAAAAGTCAACATTAGGTTATA
GTGACACTGTTAGTTTTGCTATGGAAGTAAGTCCCTGGAGTTGTCTGCAGAAGCAAGCAGCATG
GGGACGGAGTGTGGTTGACTTTTTTCTGGTGATAACCCAGCTAGGATTCTGTAGTGTTTATATT
GTCTTCTTAGCTGAAAATGTAAAACAAGTTCATGAAGGGTTCTTGGAGAATAAAGTGTTTGTTT
TGAATAGTACCAATTCATCAAATCCATGTGAGAGAAGAACTGTTGACCTAAGGATATACATGCT
TTGCTTTCTTCCACTTTTAATTCTTTTGGTCTTCATTCGTGAGCTGAAGAATCTATTTGTATTT
TCATTCCTTGCCAACATTTCCATGGCTGTCAGTCTTGTGATAATTTATCAGTACGTTGTTAGGA
ATATGCCAGATCCCCACAACCTTCCAATAGTGGCTGGTTGGAAAAAATACCCTCTCTTTTTTGG
TACTGCCGTGTTTGCTTTTGAAGGCATAGGAGTGGTCCTTCCGCTTGAAAATCAAATGAAAGAC
TCCAGACGCTTCCCCCAAGCATTGAATATTGGCATGGGAATTGTTACAACTCTGTATATAACCT
TAGCTACCTTAGGATATATGTGTTTCCATGATGAAATCAAAGGCAGCATAACTTTAAATCTTCC
CCAAGATGTATGGTTATATCAATCAGTGAAAATTCTGTATTCCTTCGGCATCTTTGTGACATAC
TCGATTCAGTTCTATGTTCCAGCAGAGATAATTATTCCTGTGATCACATCCAAATTTCATGCTA
AATGGAAGCAAATCTGTGAATTTGCAATAAGGTCCTTCTTGGTAACCATTACTTGTGCCGGAGC
GATTCTGATTCCTCGTTTAGACATTGTGATTTCCTTTGTTGGAGCCGTGAGCAGCAGCACGTTG
GCCCTGATCCTACCGCCCTTGGTTGAAATCCTGACATTTTCTAAGGAGCACTACAATATATGGA
TGATCCTGAAAAATATTTCTATCGCATTCACTGGGGTTGTTGGTTTCTTGTTAGGTACATATGT
AACTGTGGAAGAAATTCTCTATCCGACTCCCAGAGTTCCCGCTGGCACTCCACAGAGTTCCTCT
TTAAGCTTGAATTCAACATCGTGCTTTATATCTGGTTTGAAATAGCAAAAGCAGAATTAGGAGC
CTTCTACATTTTGTCTCGTCTGGAATTGATTAAAATAGCTAGTCGAATACATTGCTATTTACTG
AAACAGAGAACCAAACTGTTTTCTATTTATTTTGGCAGTAAGTTATAATTCTTTTCCAGTTCTG
ATAAACTATGACAGATTCTTGGTTTTTACGTATTAGCAGCCATTTGGGAAAAGTTAGTTTTGAA
AAATGAAAAAATTAAAGAATGAAAATACTTCTGTTATTCTTCATTCAATCAGAAATACTTTAAC
CAAGATTCTCACTTTTAGCCTCATGCTACTTTTTTGCCACCCAGTTGAGAAAACAGGGTTTCAC
CAGTAAGAACATGAAAGAAGCATATAGGTAATGAAAATCTGACCGTGCCAGTGAGTGTCAAAGT
ATACTTTGTATAATGTAAAAAGATCTCAGTTATGTTTTTATTAGAGAGCCAAATAAACCTTGGG
AGTTGAGAAAACTCTCATTAGCCATAATGTAAACATCAGAAAATCCCCCAACCAGCATTATTTT
TGTACTATTCTGTCATGGTAGCTGATCTTCATAATGAAAACCAGGAGGCCCTGTGCAAGATTCC
GACTTAGCCTGACAAATTTGAAAGAGACTTTATCCAATACAAATTCCCCCACCCCGCCTTTCTT
TTTGCGTGAGAAAATCGATGCCCACGGTGGTTTAGTAACTCGGTCAAGACCACTCAGCCCTGAG
ATCAAGCGAATCTCATCTTTTGATTCCCAGGATTTTTTTATCGTTCACATCACATCCTAGAAAA
AGAATAAACTATGTTCAGT

hide sequence

Protein Sequences


Protein RefSeqs	XP_005667282	(Get FASTA)	NCBI Sequence Viewer
	XP_013834722	(Get FASTA)	NCBI Sequence Viewer
	XP_020918296	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000022788
	ENSSSCP00000022788.3
	ENSSSCP00000066780
	ENSSSCP00000066780.1
	ENSSSCP00015043214.1
	ENSSSCP00015043270.1
	ENSSSCP00025019382.1
	ENSSSCP00025019419.1
	ENSSSCP00030041625.1
	ENSSSCP00030041644.1
	ENSSSCP00035005484.1
	ENSSSCP00040038233.1
	ENSSSCP00040038302.1
	ENSSSCP00045021901.1
	ENSSSCP00045021991.1
	ENSSSCP00050009132.1
	ENSSSCP00050009145.1
	ENSSSCP00055021157.1
	ENSSSCP00055021224.1
	ENSSSCP00060039599.1
	ENSSSCP00060039605.1
	ENSSSCP00065028421.1
	ENSSSCP00065028426.1
	ENSSSCP00070020811.1

RefSeq Acc Id:	XP_005667282 ⟸ XM_005667225
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D1WH29 (UniProtKB/TrEMBL), A0A480EJB7 (UniProtKB/TrEMBL), A0A4X1TWC3 (UniProtKB/TrEMBL), I3LFE6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLPAARVGCAGPGRSRPDAGHAAAGARASGRRRPGDPREMEAAAPAAAEAAGREELDMDVMRPL INEQNFDGTSDEEHEQELLPVQKHYQLDDQEGISFVQTLMHLLKGNIGTGLLGLPLAIKNAGIV LGPISLVFIGIISVHCMHILVRCSHFLCQRFKKSTLGYSDTVSFAMEVSPWSCLQKQAAWGRSV VDFFLVITQLGFCSVYIVFLAENVKQVHEGFLENKVFVLNSTNSSNPCERRTVDLRIYMLCFLP LLILLVFIRELKNLFVFSFLANISMAVSLVIIYQYVVRNMPDPHNLPIVAGWKKYPLFFGTAVF AFEGIGVVLPLENQMKDSRRFPQALNIGMGIVTTLYITLATLGYMCFHDEIKGSITLNLPQDVW LYQSVKILYSFGIFVTYSIQFYVPAEIIIPVITSKFHAKWKQICEFAIRSFLVTITCAGAILIP RLDIVISFVGAVSSSTLALILPPLVEILTFSKEHYNIWMILKNISIAFTGVVGFLLGTYVTVEE ILYPTPRVPAGTPQSSSLSLNSTSCFISGLK hide sequence

RefSeq Acc Id:

XP_013834722 ⟸ XM_013979268

- Peptide Label:

isoform X3

- Sequence:

show sequence

MEVSPWSCLQKQAAWGRSVVDFFLVITQLGFCSVYIVFLAENVKQVHEGFLENKVFVLNSTNSS
NPCERRTVDLRIYMLCFLPLLILLVFIRELKNLFVFSFLANISMAVSLVIIYQYVVRNMPDPHN
LPIVAGWKKYPLFFGTAVFAFEGIGVVLPLENQMKDSRRFPQALNIGMGIVTTLYITLATLGYM
CFHDEIKGSITLNLPQDVWLYQSVKILYSFGIFVTYSIQFYVPAEIIIPVITSKFHAKWKQICE
FAIRSFLVTITCAGAILIPRLDIVISFVGAVSSSTLALILPPLVEILTFSKEHYNIWMILKNIS
IAFTGVVGFLLGTYVTVEEILYPTPRVPAGTPQSSSLSLNSTSCFISGLK

hide sequence

RefSeq Acc Id:	XP_020918296 ⟸ XM_021062637
- Peptide Label:	isoform X2
- UniProtKB:	A0A8D1WHS5 (UniProtKB/TrEMBL), A0A5G2QPX8 (UniProtKB/TrEMBL), A0A4X1TWC3 (UniProtKB/TrEMBL), I3LFE6 (UniProtKB/TrEMBL), A0A8D0Q4R1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDVMRPLINEQNFDGTSDEEHEQELLPVQKHYQLDDQEGISFVQTLMHLLKGNIGTGLLGLPLA IKNAGIVLGPISLVFIGIISVHCMHILVRCSHFLCQRFKKSTLGYSDTVSFAMEVSPWSCLQKQ AAWGRSVVDFFLVITQLGFCSVYIVFLAENVKQVHEGFLENKVFVLNSTNSSNPCERRTVDLRI YMLCFLPLLILLVFIRELKNLFVFSFLANISMAVSLVIIYQYVVRNMPDPHNLPIVAGWKKYPL FFGTAVFAFEGIGVVLPLENQMKDSRRFPQALNIGMGIVTTLYITLATLGYMCFHDEIKGSITL NLPQDVWLYQSVKILYSFGIFVTYSIQFYVPAEIIIPVITSKFHAKWKQICEFAIRSFLVTITC AGAILIPRLDIVISFVGAVSSSTLALILPPLVEILTFSKEHYNIWMILKNISIAFTGVVGFLLG TYVTVEEILYPTPRVPAGTPQSSSLSLNSTSCFISGLK hide sequence

Ensembl Acc Id:

ENSSSCP00000066780 ⟸ ENSSSCT00000078849

Ensembl Acc Id:

ENSSSCP00000022788 ⟸ ENSSSCT00000023503

Protein Domains

Amino acid transporter transmembrane

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000024933	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015076754	UniProtKB/TrEMBL
	ENSSSCG00025033410	UniProtKB/TrEMBL
	ENSSSCG00030064647	UniProtKB/TrEMBL
	ENSSSCG00035012620	UniProtKB/TrEMBL
	ENSSSCG00040063806	UniProtKB/TrEMBL
	ENSSSCG00045018599	UniProtKB/TrEMBL
	ENSSSCG00050016018	UniProtKB/TrEMBL
	ENSSSCG00055013509	UniProtKB/TrEMBL
	ENSSSCG00060067101	UniProtKB/TrEMBL
	ENSSSCG00065047955	UniProtKB/TrEMBL
	ENSSSCG00070012858	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000023503	ENTREZGENE
	ENSSSCT00000023503.3	UniProtKB/TrEMBL
	ENSSSCT00000078849	ENTREZGENE
	ENSSSCT00000078849.1	UniProtKB/TrEMBL
	ENSSSCT00015103593.1	UniProtKB/TrEMBL
	ENSSSCT00015103675.1	UniProtKB/TrEMBL
	ENSSSCT00025045459.1	UniProtKB/TrEMBL
	ENSSSCT00025045554.1	UniProtKB/TrEMBL
	ENSSSCT00030090340.1	UniProtKB/TrEMBL
	ENSSSCT00030090379.1	UniProtKB/TrEMBL
	ENSSSCT00035015917.1	UniProtKB/TrEMBL
	ENSSSCT00040087079.1	UniProtKB/TrEMBL
	ENSSSCT00040087205.1	UniProtKB/TrEMBL
	ENSSSCT00045031632.1	UniProtKB/TrEMBL
	ENSSSCT00045031756.1	UniProtKB/TrEMBL
	ENSSSCT00050021769.1	UniProtKB/TrEMBL
	ENSSSCT00050021789.1	UniProtKB/TrEMBL
	ENSSSCT00055026616.1	UniProtKB/TrEMBL
	ENSSSCT00055026695.1	UniProtKB/TrEMBL
	ENSSSCT00060091567.1	UniProtKB/TrEMBL
	ENSSSCT00060091601.1	UniProtKB/TrEMBL
	ENSSSCT00065065600.1	UniProtKB/TrEMBL
	ENSSSCT00065065612.1	UniProtKB/TrEMBL
	ENSSSCT00070025119.1	UniProtKB/TrEMBL
InterPro	AA_transpt_TM	UniProtKB/TrEMBL
KEGG Report	ssc:100511947	UniProtKB/TrEMBL
NCBI Gene	SLC36A4	ENTREZGENE
PANTHER	AMINO ACID TRANSPORTER	UniProtKB/TrEMBL
	PROTON-COUPLED AMINO ACID TRANSPORTER 4	UniProtKB/TrEMBL
Pfam	Aa_trans	UniProtKB/TrEMBL
UniProt	A0A480EJB7	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1TWC3	ENTREZGENE, UniProtKB/TrEMBL
	A0A5G2QPX8	ENTREZGENE
	A0A8D0Q4R1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1WH29	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1WHS5	ENTREZGENE, UniProtKB/TrEMBL
	I3LFE6	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	A0A5G2QPX8	UniProtKB/TrEMBL
VGNC ID	VGNC:93091	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

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